Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_D03
         (792 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090945-1|AAH90945.1|  421|Homo sapiens acyl-CoA thioesterase 4...    33   1.6  
BC000579-1|AAH00579.1|  267|Homo sapiens PRPF8 protein protein.        31   4.8  

>BC090945-1|AAH90945.1|  421|Homo sapiens acyl-CoA thioesterase 4
           protein.
          Length = 421

 Score = 32.7 bits (71), Expect = 1.6
 Identities = 22/62 (35%), Positives = 30/62 (48%)
 Frame = +2

Query: 272 WSEVTSIREVGDEAPERRGWRAACTRDTRGALPASPSRLDTDVCHNIEMNAETAASGGPV 451
           W+E   I   G  APE+R    A  RD +GAL  + +R   D C  +++     A GG  
Sbjct: 15  WNEPVRIAVRG-LAPEQRVTLRASLRDEKGALFRAHARYCADACGELDLE-RAPALGGSF 72

Query: 452 AG 457
           AG
Sbjct: 73  AG 74


>BC000579-1|AAH00579.1|  267|Homo sapiens PRPF8 protein protein.
          Length = 267

 Score = 31.1 bits (67), Expect = 4.8
 Identities = 16/29 (55%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +3

Query: 558 TLPRELPPRPRSWLCTALD---RSVTSHA 635
           TLP   PP PRSWL T L    R ++SHA
Sbjct: 231 TLPMMSPPMPRSWLTTHLGMARRPLSSHA 259


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,063,269
Number of Sequences: 237096
Number of extensions: 1048187
Number of successful extensions: 3358
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3358
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)