Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_C17
         (793 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0114 + 25958834-25961296                                         30   1.8  
04_01_0021 + 311914-312399,314218-314310,314391-314672,314754-31...    30   2.4  
11_06_0621 + 25587476-25587604,25588230-25588423,25588800-255888...    28   9.8  

>02_05_0114 + 25958834-25961296
          Length = 820

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +2

Query: 650 SLLHXDDXXQXDCXXDXXALTLAYXSXHPRXRSRTLCPEN 769
           S+L      Q DC  D   L  A  S H R RSRTLC ++
Sbjct: 30  SVLTASASVQSDCSSDDEKLNCA-PSQHARKRSRTLCSDS 68


>04_01_0021 +
           311914-312399,314218-314310,314391-314672,314754-314826,
           315273-315405,315476-315629,315763-315843,316174-316296,
           316629-316787,316862-316996,317159-317254,317416-317910,
           318651-318722,319496-319537
          Length = 807

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = +2

Query: 359 PXLGPHPGXPVSTVQLLPCEGTQDALLDSTGLGQPERGR 475
           P +G HP     T+ L+  +G +D+  +ST    P+RG+
Sbjct: 763 PRVGLHPTDQAYTLNLIGDQGIEDSSTNSTSSVNPKRGQ 801


>11_06_0621 +
           25587476-25587604,25588230-25588423,25588800-25588874,
           25589434-25591852
          Length = 938

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = +2

Query: 650 SLLHXDDXXQXDCXXDXXALTLAYXSXHPRXRSRTLCPEN 769
           S+L      Q DC  D   L  A  S H R RSR LC ++
Sbjct: 148 SVLTASASVQSDCSSDDEKLNCA-PSQHARKRSRPLCSDS 186


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,650,891
Number of Sequences: 37544
Number of extensions: 124541
Number of successful extensions: 213
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)