Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_B24
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 128 3e-30
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 128 3e-30
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 128 3e-30
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 128 3e-30
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 96 2e-20
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 96 2e-20
Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc... 29 2.9
AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical ... 28 6.7
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIRE 99
+D + E
Sbjct: 391 RDFLAE 396
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIRE 99
+D + E
Sbjct: 391 RDFLAE 396
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 116 KDRIRE 99
+D + E
Sbjct: 293 RDFLAE 298
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIRE 99
+D + E
Sbjct: 391 RDFLAE 396
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 85 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 144
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 145 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 190
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 233 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 292
Query: 116 KDRIRE 99
+D + E
Sbjct: 293 RDFLAE 298
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 199 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 238
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 128 bits (310), Expect = 3e-30
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = -2
Query: 748 IQLNGVPSGQS-EWAREHLEXPIPVDSVFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPV 572
IQ+NG Q +WAREHLE + VD+VFAQDEMID I TSR + P
Sbjct: 183 IQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLPR 242
Query: 571 RHXKXLRKVACIGAWHPSRVSFTVARAGQKGYHHRTEMNKKIYRIG 434
+ K LRKVACIGAWHPSRV+FTVARAGQKG+HHRT +N KIYRIG
Sbjct: 243 KTHKGLRKVACIGAWHPSRVAFTVARAGQKGFHHRTIINNKIYRIG 288
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 331 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 390
Query: 116 KDRIRE 99
+D + E
Sbjct: 391 RDFLAE 396
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 297 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 336
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 116 KDRIRE 99
+D + E
Sbjct: 343 RDFLAE 348
Score = 95.1 bits (226), Expect = 5e-20
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -2
Query: 670 VFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPVRHXKXLRKVACIGAWHPSRVSFTVARA 491
V A +MID I TSR + P + K LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 490 GQKGYHHRTEMNKKIYRIG 434
GQKG+HHRT +N KIYRIG
Sbjct: 222 GQKGFHHRTIINNKIYRIG 240
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 96.3 bits (229), Expect = 2e-20
Identities = 46/66 (69%), Positives = 53/66 (80%)
Frame = -1
Query: 296 KGCCMGPKKRIITLRKSLRVHTKRAALEKINLKFIDTSSKFGHGRFQTLADKAAFMGTLK 117
+G +GPKKR+ITLRKSL TKR A EKINLK+IDTSSK GHGRFQT A+K AFMG LK
Sbjct: 283 RGAVLGPKKRLITLRKSLITQTKRVAHEKINLKWIDTSSKTGHGRFQTTAEKRAFMGKLK 342
Query: 116 KDRIRE 99
+D + E
Sbjct: 343 RDFLAE 348
Score = 95.1 bits (226), Expect = 5e-20
Identities = 47/79 (59%), Positives = 53/79 (67%)
Frame = -2
Query: 670 VFAQDEMIDCIXXXXXXXXXXXTSRCTQRSYPVRHXKXLRKVACIGAWHPSRVSFTVARA 491
V A +MID I TSR + P + K LRKVACIGAWHPSRV+FTVARA
Sbjct: 162 VIAHTQMIDTIGVTRGHGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSRVAFTVARA 221
Query: 490 GQKGYHHRTEMNKKIYRIG 434
GQKG+HHRT +N KIYRIG
Sbjct: 222 GQKGFHHRTIINNKIYRIG 240
Score = 62.5 bits (145), Expect = 3e-10
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = -3
Query: 399 KNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMXQGLLHG 280
KNN STE+DL++K+ITPMGGFP YG VN D++M +G + G
Sbjct: 249 KNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLG 288
>Z32679-5|CAA83594.2| 408|Caenorhabditis elegans Hypothetical
protein C05B5.6 protein.
Length = 408
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +3
Query: 144 VSQRLESTMTELGRGV-NEF--EVDLF*CSPLCMHTQRLSKSNDTLFRSHAATLXSSQSR 314
+ Q ++T LG G+ +EF +D F C +RLSK++ LFR + +
Sbjct: 283 LEQYKQATSLSLGSGMFSEFFKHIDHFKSLKFCFFGKRLSKNHIELFRDNVIAKSVNLES 342
Query: 315 CLLHH 329
C H
Sbjct: 343 CTFEH 347
>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyclase
protein 21 protein.
Length = 1119
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 211 FSSAALFVCTRRDFLRVMIRFLGPMQQPLXHHKVVVYFTIM 333
FS LF+ + FL+++IR+L + P+ +H VV T M
Sbjct: 1049 FSLNKLFIV--KSFLKLLIRYLQMRRHPISNHNVVTVKTCM 1087
>AF125451-3|AAD12821.2| 193|Caenorhabditis elegans Hypothetical
protein Y37E11B.1a protein.
Length = 193
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 376 ILSR-CIVFNNFAILFVDSLVQYDRFSCSFQYGDDNLSDQHEL 501
IL R ++F FAI F RF+C Y +LSD ++
Sbjct: 99 ILERNLLIFGYFAIFFSQKNTYISRFTCPMCYASFDLSDPFKI 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,008,298
Number of Sequences: 27780
Number of extensions: 382542
Number of successful extensions: 998
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 919
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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