Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_B18
         (789 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3477|AAF51682.1|  314|Drosophila melanogaster CG12976-P...    30   4.1  
AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p pro...    29   5.5  
AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-P...    29   5.5  
AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA...    29   9.6  

>AE014296-3477|AAF51682.1|  314|Drosophila melanogaster CG12976-PA
           protein.
          Length = 314

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
 Frame = -2

Query: 740 YWRXRPYASSHPXXXXSXTSTPIIKS--PDSI-HQPPQT*HPFPSIP 609
           Y+R  PYAS H         TP  +   P S+ H PP+  HP+  +P
Sbjct: 60  YYRYAPYASPHYSQHHQGMFTPAGQQIIPSSVLHYPPRP-HPYQQLP 105


>AY060828-1|AAL28376.1|  337|Drosophila melanogaster GM01318p
           protein.
          Length = 337

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 27/81 (33%), Positives = 33/81 (40%)
 Frame = -1

Query: 765 PPLXXXAXXLAASPLCIKPPXPXDXGYINPDHQIPXFHTPTTPDLTSISINPLTPY*KEF 586
           PP         A P   +PP P   G++ P H    F  P  P+   +S NP  PY    
Sbjct: 146 PPYQPAGSWNEAPPPAYQPP-PGYYGWL-PQHDA--FSGPA-PNTVYMSDNP-PPY---- 195

Query: 585 APGLKPPLSSEAPSAYLTPSS 523
            PG+ PP    AP     PSS
Sbjct: 196 -PGIAPPAHQPAPQQPQAPSS 215


>AE014296-2207|AAF49872.2|  427|Drosophila melanogaster CG11009-PA
           protein.
          Length = 427

 Score = 29.5 bits (63), Expect = 5.5
 Identities = 27/81 (33%), Positives = 33/81 (40%)
 Frame = -1

Query: 765 PPLXXXAXXLAASPLCIKPPXPXDXGYINPDHQIPXFHTPTTPDLTSISINPLTPY*KEF 586
           PP         A P   +PP P   G++ P H    F  P  P+   +S NP  PY    
Sbjct: 146 PPYQPAGSWNEAPPPAYQPP-PGYYGWL-PQHDA--FSGPA-PNTVYMSDNP-PPY---- 195

Query: 585 APGLKPPLSSEAPSAYLTPSS 523
            PG+ PP    AP     PSS
Sbjct: 196 -PGIAPPAHQPAPQQPQAPSS 215


>AE014296-3425|AAF51645.2|  926|Drosophila melanogaster CG3680-PA
           protein.
          Length = 926

 Score = 28.7 bits (61), Expect = 9.6
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = -1

Query: 648 PTTPDLTSISINPLTPY*KEFAPGLKPPLSSEAPSAYLTPSSLGMXKGVSP 496
           PTTP  T  SI+P T   KE AP  +    +   +   TP   G  +G SP
Sbjct: 413 PTTPKTTVKSISPTTTTKKEVAPKKRSATPTARSTKAGTPVG-GTERGPSP 462


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,303,584
Number of Sequences: 53049
Number of extensions: 682328
Number of successful extensions: 1874
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1872
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3654740856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)