Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_B07
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 50 3e-06
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 43 3e-04
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 43 3e-04
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 43 3e-04
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 42 5e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 41 0.001
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 41 0.001
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 41 0.001
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 40 0.002
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 40 0.002
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 0.002
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 40 0.002
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 40 0.002
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 40 0.002
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.005
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 39 0.005
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 39 0.005
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 39 0.005
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 39 0.005
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 39 0.005
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 38 0.006
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 38 0.006
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 38 0.009
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 38 0.011
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 37 0.020
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 36 0.034
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 36 0.046
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 36 0.046
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 36 0.046
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 35 0.060
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 34 0.11
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 34 0.14
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 34 0.14
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 33 0.18
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.18
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 33 0.24
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 32 0.42
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 31 0.74
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 31 0.98
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 28 9.1
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 28 9.1
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/65 (38%), Positives = 34/65 (52%)
Frame = -3
Query: 561 SVXREQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIHXXXXXXXXXXXXXXVSX 382
S ++ + DVLV TD+ + GLDI GV TVIN +P ++ YIH +S
Sbjct: 461 SKFKKAEIDVLVSTDLASRGLDIEGVQTVINMNMPKSIKQYIHRVGRTARAGKAGRSISL 520
Query: 381 AGEGE 367
GE E
Sbjct: 521 VGEDE 525
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R+ + DVLV TDV + GLD G+ VINF +P + +Y+H
Sbjct: 488 RKNEKDVLVATDVASKGLDFQGIEHVINFDMPEDIENYVH 527
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/40 (45%), Positives = 27/40 (67%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
+ + ++LV TDV A GLDIP V+ VIN+ +P+ Y+H
Sbjct: 330 KSKAREILVCTDVAARGLDIPHVDMVINYDMPSQSKDYVH 369
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R Q +LV T V A GLDIP V VIN+ LP Y+H
Sbjct: 445 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 484
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R Q +LV T V A GLDIP V VIN+ LP Y+H
Sbjct: 429 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 468
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R Q +LV T V A GLDIP V VIN+ LP Y+H
Sbjct: 426 RSGQCPILVATAVAARGLDIPNVRHVINYDLPGDSDEYVH 465
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 41.9 bits (94), Expect = 5e-04
Identities = 18/34 (52%), Positives = 23/34 (67%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
+LV T V A GLDIP V VIN+ LP+ + Y+H
Sbjct: 480 ILVATAVAARGLDIPNVKHVINYDLPSDVDEYVH 513
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ TDV A GLD+P V+ VIN+ LP YIH
Sbjct: 318 VLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
E+Q ++LV TDV A G+DIP ++TVIN P ++H
Sbjct: 313 EKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 41.1 bits (92), Expect = 0.001
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
E+Q ++LV TDV A G+DIP ++TVIN P ++H
Sbjct: 313 EKQNNILVVTDVAARGVDIPLLDTVINLHFPPKAKLFVH 351
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ TDV A GLD+P V+ VIN+ LP YIH
Sbjct: 318 VLISTDVWARGLDVPQVSLVINYDLPNNRELYIH 351
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 561 SVXREQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
S R + V++ TDV + GLDIP V+ V+N +P YIH
Sbjct: 381 SAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIH 423
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -3
Query: 561 SVXREQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
S R + V++ TDV + GLDIP V+ V+N +P YIH
Sbjct: 381 SAFRSKTLQVIICTDVASRGLDIPHVDLVVNHNVPQCPKTYIH 423
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ TD+ A G+D+ V+ VIN+ LP+ +YIH
Sbjct: 321 VLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
E + VL+ TDV A GLDI G++ VI++ +P + YIH
Sbjct: 321 ESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 359
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
E + VL+ TDV A GLDI G++ VI++ +P + YIH
Sbjct: 488 ESKNAVLLATDVAARGLDIQGIDHVIHYQVPKKVEIYIH 526
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ TD+ A G+D+ V+ VIN+ LP+ +YIH
Sbjct: 34 VLITTDILARGIDVQQVSLVINYDLPSNRENYIH 67
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ TD+ A G+D+ V+ VIN+ LP+ +YIH
Sbjct: 321 VLITTDILARGIDVQQVSLVINYDLPSNRENYIH 354
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = -3
Query: 561 SVXREQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
++ R + +LV TD+ + G+D+P + V+N+ P + Y+H
Sbjct: 382 NMLRSGEVQILVATDLASRGIDVPDITHVLNYDFPMDIEEYVH 424
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 653 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 692
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 864 RNGSKPVLIATAVAERGLDIKGVDHVINYDMPDNIDDYIH 903
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 616 VLIATAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ T V GLDI GV+ VIN+ +P + YIH
Sbjct: 616 VLIATAVVERGLDIKGVDHVINYDMPNNIDDYIH 649
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = -3
Query: 546 QQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
++ +LV TDV A GLDI + TVINF + + ++H
Sbjct: 559 KKSQILVATDVAARGLDISEIRTVINFDMARDIDTHVH 596
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VLV T++ GLD+ V VIN+ LP ++ YIH
Sbjct: 428 VLVCTELLGRGLDLSDVGLVINYDLPTSIVSYIH 461
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 36.7 bits (81), Expect = 0.020
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
+E D+LV TDV G+D+ V+ V+N+ + ++ Y H
Sbjct: 620 KEGTSDILVATDVAGRGIDVKDVSLVLNYDMAKSIEDYTH 659
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3
Query: 531 LVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
LV +DV A GLD+ GV VI+ TLP Y+H
Sbjct: 559 LVCSDVVARGLDVQGVPFVISVTLPDEKSMYVH 591
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
++ Q +LV TD+ G+DI VN V N+ +P Y+H
Sbjct: 330 KDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 369
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
++ Q +LV TD+ G+DI VN V N+ +P Y+H
Sbjct: 322 KDFQKRILVATDLFGRGMDIERVNIVFNYDMPEDSDSYLH 361
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 35.5 bits (78), Expect = 0.046
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 531 LVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
LV +D+ G+DI VN VINF P Y+H
Sbjct: 334 LVCSDLLTRGIDIQAVNVVINFDFPRNAETYLH 366
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 35.1 bits (77), Expect = 0.060
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
E + VL+ TDV + GLD ++ VI PA + YIH
Sbjct: 370 ESKAAVLIATDVASRGLDFEHIDWVIQVDCPAQIDDYIH 408
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 34.3 bits (75), Expect = 0.11
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
+++ TDV A GLD+ + VIN+ P Y+H
Sbjct: 429 IMLATDVAARGLDVDDIKFVINYDYPNNSEDYVH 462
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R ++ +LV +D+TA G+D VN V+N A Y H
Sbjct: 306 RAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
R ++ +LV +D+TA G+D VN V+N A Y H
Sbjct: 306 RAKRVKILVSSDLTARGIDADNVNLVVNIDAAANEETYFH 345
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
V++ TDV A G+DI ++ VI F LP ++H
Sbjct: 312 VMISTDVMARGIDISDIDWVIQFDLPKHSSWFVH 345
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VL+ +DV A G D+ V+ VIN+ LPA ++H
Sbjct: 452 VLICSDVLARGTDLNKVDCVINYNLPADDKLFVH 485
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 549 EQQXDVLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
+ + +L+ TDV A GLDIP V+ ++ + YIH
Sbjct: 362 QAETGILLCTDVAARGLDIPAVDWIVQYDPTDEPREYIH 400
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 32.3 bits (70), Expect = 0.42
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLPATLXHYIH 433
VLV T V A GLD+ + V+N+ P Y+H
Sbjct: 605 VLVATSVAARGLDVKNLILVVNYDCPNHYEDYVH 638
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 31.5 bits (68), Expect = 0.74
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -3
Query: 552 REQQXDVLVXTDVTAXGLDIPGVNTVINFTLP 457
+ + ++LV TD+ + G+D+ ++ VINF LP
Sbjct: 693 KSNRVNLLVTTDLLSRGIDVSDLDRVINFDLP 724
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLP 457
VL+ T+V A G+D+ V+ VIN+ LP
Sbjct: 508 VLITTNVFARGIDVAQVSVVINYDLP 533
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLP 457
VL+ T+V A G+D+ V+ VIN+ LP
Sbjct: 533 VLITTNVFARGIDVAQVSVVINYDLP 558
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 31.1 bits (67), Expect = 0.98
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 534 VLVXTDVTAXGLDIPGVNTVINFTLP 457
VL+ T+V A G+D+ V+ VIN+ LP
Sbjct: 917 VLITTNVFARGIDVAQVSVVINYDLP 942
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 504 GLDIPGVNTVINFTLPATLXHYIH 433
G+D V+ V+NF P T YIH
Sbjct: 371 GIDFHHVSNVVNFDFPETTDAYIH 394
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 27.9 bits (59), Expect = 9.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -3
Query: 504 GLDIPGVNTVINFTLPATLXHYIH 433
G+D V+ V+NF P T YIH
Sbjct: 438 GIDFHHVSNVVNFDFPETTDAYIH 461
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,534,518
Number of Sequences: 27780
Number of extensions: 159065
Number of successful extensions: 347
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 347
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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