Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_B03
         (825 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    25   0.85 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    25   1.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    24   2.0  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    23   2.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           23   4.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   4.5  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    22   6.0  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    22   7.9  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    22   7.9  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 561 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCLPVCSERCV 418
           NG C+ +C  A    + S    C C DG +L   D  +C+   S   V
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCVEKVSTTIV 86


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 561 NGTCAPVCRRACTNGACSEPDKCTCDDGYRLSPEDPFVCL 442
           NG C+ +C  A    + S    C C DG +L   D  +C+
Sbjct: 40  NGHCSHLCLPAPRINSKSPLLSCACPDGLKLL-SDGLMCV 78


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 22/79 (27%), Positives = 33/79 (41%)
 Frame = -1

Query: 690 GLCTCDSGYKNIDDVCVPQCLDCRNGECVAPNDCLCHDNYAMSNGTCAPVCRRACTNGAC 511
           G C C  GY+   DV   +C +C  G+         H+  + S   C P   ++   G  
Sbjct: 245 GGCHCKPGYQA--DVEKQECTECPIGK-------FKHEAGSHSCEAC-PAHSKSSDYGFT 294

Query: 510 SEPDKCTCDDGYRLSPEDP 454
               +C CD GY  + +DP
Sbjct: 295 ----ECRCDPGYFRAEKDP 309


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECGLGS--GCPSEQTHF 151
           N++AC+ANC + G+  G     GC   +T F
Sbjct: 56  NDSACAANCLSLGKAGGHCEKVGCICRKTSF 86


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECG 187
           N++AC+ANC + G+  G
Sbjct: 31  NDSACAANCHSLGKAGG 47


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 10/30 (33%), Positives = 12/30 (40%)
 Frame = -1

Query: 666 YKNIDDVCVPQCLDCRNGECVAPNDCLCHD 577
           Y+  D   V QC+ CR G         C D
Sbjct: 615 YQIRDHKDVTQCISCRQGTVPDETHSACRD 644


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 22.2 bits (45), Expect = 6.0
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -1

Query: 237 NNTACSANCSAGGEECG 187
           N++AC+ANC + G+  G
Sbjct: 56  NDSACAANCLSLGKAGG 72


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 366 RNDTNSNVCYKKCDGACE 313
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 366 RNDTNSNVCYKKCDGACE 313
           R    SN  + +CDG C+
Sbjct: 34  RGKCPSNEIFSRCDGRCQ 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,601
Number of Sequences: 438
Number of extensions: 4361
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)