Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_B02
(792 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.54
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.54
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 31 0.71
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 31 0.71
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 31 0.94
L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical pr... 30 2.2
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 29 3.8
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 29 3.8
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 5.0
Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical p... 28 6.7
Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 28 6.7
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical ... 28 6.7
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 6.7
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 28 8.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.54
Identities = 32/109 (29%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Frame = +3
Query: 342 ISGDTPWAAHRSHLAPPHHRTDSRVPG-APAPAT**SLRGLSGSFTPAPAIPPSALRC*X 518
+ +TP A H A H T PG P P + G G + P P PPS
Sbjct: 218 VPANTPLAMPGVHAAIAAHATGR--PGYQPPPLMGMAQSGYQGQYPPVPPPPPSV----- 270
Query: 519 GIPXPFTLLXXXG-TPLPXPKXXHGL--PXXPDPLXCXXXXPXXXGFSP 656
P P + G TP P P G+ P P P P G P
Sbjct: 271 -TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 318
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.54
Identities = 32/109 (29%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Frame = +3
Query: 342 ISGDTPWAAHRSHLAPPHHRTDSRVPG-APAPAT**SLRGLSGSFTPAPAIPPSALRC*X 518
+ +TP A H A H T PG P P + G G + P P PPS
Sbjct: 228 VPANTPLAMPGVHAAIAAHATGR--PGYQPPPLMGMAQSGYQGQYPPVPPPPPSV----- 280
Query: 519 GIPXPFTLLXXXG-TPLPXPKXXHGL--PXXPDPLXCXXXXPXXXGFSP 656
P P + G TP P P G+ P P P P G P
Sbjct: 281 -TPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPP 328
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 PXIPRKRLRLEKGARSTCPAE-RLPTKPHRAPPHRLHQTYGTAVRAESPPSPVP 290
P I R++ +E+ + P RLP KP A +H + + A PP P P
Sbjct: 743 PSIQRRKKHVERADSAGAPGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPP 796
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 31.5 bits (68), Expect = 0.71
Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +3
Query: 132 PXIPRKRLRLEKGARSTCPAE-RLPTKPHRAPPHRLHQTYGTAVRAESPPSPVP 290
P I R++ +E+ + P RLP KP A +H + + A PP P P
Sbjct: 642 PSIQRRKKHVERADSAGAPGSPRLPPKPSVAQTIAMHSAPPSPLTAPIPPPPPP 695
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 141 PRKRLRLEKGARSTCPAERLPTKPHRAPPHRLHQTYGTAVRAESPP 278
P ++ R E R P + P PHR PH L+ VR PP
Sbjct: 628 PPRQDRYEDEERVREPPPKRPPPPHRQTPHELYPEEQPYVRRPPPP 673
>L15188-9|AAM22024.1| 618|Caenorhabditis elegans Hypothetical
protein C14B9.2 protein.
Length = 618
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Frame = +3
Query: 324 KIPKDVISGDTPWAAHRSHLAPPHHRTDSRV--PGAPAPAT 440
K P ++ PW H HLAP + + S+V P A AT
Sbjct: 52 KNPSVLVKFYAPWCGHCKHLAPEYEKASSKVSIPLAKVDAT 92
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +2
Query: 323 ENPEGRHFGRYTVGGAQEPPCT---APPPDRQSSTGRPRTRHLIVPTGAERELHXRAGHP 493
+ P G HFG + GA PP T AP P R P G + E H A P
Sbjct: 1085 QGPPGAHFGAH---GASAPPPTSYGAPTPQRPPQASYGAAPGAQGPPGGQFEAHGAAALP 1141
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 29.1 bits (62), Expect = 3.8
Identities = 20/60 (33%), Positives = 23/60 (38%), Gaps = 3/60 (5%)
Frame = +2
Query: 323 ENPEGRHFGRYTVGGAQEPPCT---APPPDRQSSTGRPRTRHLIVPTGAERELHXRAGHP 493
+ P G HFG + GA PP T AP P R P G + E H A P
Sbjct: 1105 QGPPGAHFGAH---GASAPPPTSYGAPTPQRPPQASYGAAPGAQGPPGGQFEAHGAAALP 1161
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +3
Query: 138 IPRKRLRLEKGARSTCPAERLPTKPHRAPP 227
+PRK+ R+EK + P ++ P H PP
Sbjct: 889 LPRKKQRIEKKKLTPPPPQQAPVTSHTPPP 918
>Z47357-12|CAA87429.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 213 HRAPPHRLHQTYGTAVRAESPPSPVPV 293
HR PP + + +Y T + P SP PV
Sbjct: 65 HRGPPDQSYDSYYTKITESRPRSPGPV 91
>Z30974-3|CAA83227.2| 205|Caenorhabditis elegans Hypothetical
protein ZK1128.7 protein.
Length = 205
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 213 HRAPPHRLHQTYGTAVRAESPPSPVPV 293
HR PP + + +Y T + P SP PV
Sbjct: 65 HRGPPDQSYDSYYTKITESRPRSPGPV 91
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 377 PPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHXRAGHPA 496
PP PPP R+ S R R R + G R+ PA
Sbjct: 445 PPPPPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPA 484
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 377 PPCTAPPPDRQSSTGRPRTRHLIVPTGAERELHXRAGHPA 496
PP PPP R+ S R R R + G R+ PA
Sbjct: 393 PPPPPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPA 432
>AF063007-2|AAC16433.1| 583|Caenorhabditis elegans Hypothetical
protein R119.7 protein.
Length = 583
Score = 28.3 bits (60), Expect = 6.7
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +3
Query: 132 PXIPRKRLRLEKGARSTCPAERLPTKPHRAPPHRLHQTYGTAVRAESPPS 281
P P KRLR E G+ ST P + H+T PP+
Sbjct: 422 PWSPLKRLRAESGSLSTAQVASPEFSPIKPKTMEFHETEDDVFETGPPPT 471
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 6.7
Identities = 25/89 (28%), Positives = 30/89 (33%), Gaps = 3/89 (3%)
Frame = +2
Query: 287 TRPDDKTGFHLRENPEGRHFGRYTVGGAQEPPCTAPPPDRQSSTGRPRTR-H--LIVPTG 457
TRP + F L N GAQ C A PP G P + H L G
Sbjct: 61 TRPSSGSSFLLGRNKRQAQCNC----GAQSRGCPAGPPGPPGQPGAPGEQGHPGLAGQPG 116
Query: 458 AERELHXRAGHPAFCAEVLXRDPXPFHAP 544
+ ++ G P FC P P P
Sbjct: 117 SGARINPATGRPGFCITCPAGAPGPAGPP 145
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 177 STCPAERLPTKPH-RAPPHRLHQTYGTAVRAESPP-SPVPVLMIRRDFISGKI--PKDVI 344
S+ P + P + H + PP +HQ G SPP P P++ ++ + P++V
Sbjct: 340 SSAPPFQHPQQHHPQLPPPPVHQGMGRGYHHNSPPQDPAPIVPVQAPPPQQHLPAPENVY 399
Query: 345 SGDTP 359
S + P
Sbjct: 400 SSEQP 404
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,082,173
Number of Sequences: 27780
Number of extensions: 350328
Number of successful extensions: 1216
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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