Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_T7_B01
(769 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 169 3e-43
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 33 0.045
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo... 29 0.55
SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces po... 29 0.55
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.97
SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.7
SPAC56F8.07 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 27 2.2
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.2
SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase |Schizosac... 26 5.2
SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces ... 26 5.2
SPAC27E2.12 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 6.8
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 6.8
SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces ... 26 6.8
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 25 9.0
SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces ... 25 9.0
SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase Pik3|Schizo... 25 9.0
SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit ... 25 9.0
SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr ... 25 9.0
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 25 9.0
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 169 bits (412), Expect = 3e-43
Identities = 72/110 (65%), Positives = 97/110 (88%)
Frame = -2
Query: 666 RRVIKPLEXLLIAHKRIFIKDSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEA 487
RRVI+PLE LL+ +KRI +KDSAVNA+CYGAK+++PG+LRYE GIEV++EIV++TTKGEA
Sbjct: 258 RRVIRPLESLLVGYKRIVVKDSAVNAICYGAKLMIPGLLRYEAGIEVNEEIVLITTKGEA 317
Query: 486 VALAVALMTTSTMASCDHGVAAKLKRVIMERDTYPRKWGLGPKASQKKIL 337
+A+ +A M+T +++CDHGV AK+KR IMERD YPR+WGLGP++ +KK L
Sbjct: 318 IAVGIAQMSTVELSTCDHGVVAKVKRCIMERDVYPRRWGLGPQSMKKKTL 367
Score = 54.8 bits (126), Expect = 1e-08
Identities = 20/33 (60%), Positives = 28/33 (84%)
Frame = -3
Query: 350 RKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYN 252
+KK+ K+GKLDKYG+PNENTP +W SY++Y+
Sbjct: 363 KKKTLKKEGKLDKYGRPNENTPADWSKSYIDYS 395
Score = 42.3 bits (95), Expect = 7e-05
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1
Query: 766 RSGIQGXKEGMXTMHDILDAQWSYEXPKDETY 671
RSG + + TMHD+LDAQW Y+ +DE+Y
Sbjct: 225 RSGCLSENDDIVTMHDVLDAQWIYDNTRDESY 256
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 33.1 bits (72), Expect = 0.045
Identities = 26/116 (22%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Frame = -3
Query: 365 DRKLHRKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRKRTAST 186
D + +S + K D E++ +E +S + + ++E E+ + E +K+ +
Sbjct: 18 DSSEENRLTSSRLKKQDDSSSEEESSEEESASSSESESSEEESESEESEVEVPKKK--AV 75
Query: 185 ANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDT---SESPETAEQPADDSVR 27
A +ED + E +E + DSE E+++ ++ SE +E+ +D+S R
Sbjct: 76 AASEDSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESER 131
>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 572
Score = 29.5 bits (63), Expect = 0.55
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = -3
Query: 383 PENGVSDRKLHRKKS-SYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGS 207
P GV +L K+S SY+ K + + PK + N+ N+KK +GD +
Sbjct: 244 PAIGVLIPRLIMKESKSYENSKALNSAEGKD--PKAFFNTDDEDNMKKSSSHGDSEVVEA 301
Query: 206 RKRTASTANAEDPDVSIEVKQ 144
R A+ A+A D +V KQ
Sbjct: 302 SDRYANQADAADAEVDNIEKQ 322
>SPAC3G6.06c |rad2|fen1|FEN-1 endonuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 380
Score = 29.5 bits (63), Expect = 0.55
Identities = 12/53 (22%), Positives = 30/53 (56%)
Frame = -3
Query: 359 KLHRKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKEPENGDGVEEGSRK 201
+L + + QG+LD + KP ++PK+ +++ + K++ ++ G E ++
Sbjct: 328 RLEKASKTIPQGRLDSFFKPVPSSPKKPVDTKSKGSAKRKRDSNKGGESKKKR 380
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 28.7 bits (61), Expect = 0.97
Identities = 15/65 (23%), Positives = 29/65 (44%)
Frame = -3
Query: 236 ENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPET 57
E + VE+ K+ S+ ++ D + S + E DSE+ + ++ P +
Sbjct: 186 EEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSEDEKKRKAEPAS 245
Query: 56 AEQPA 42
E+PA
Sbjct: 246 EERPA 250
>SPAC15F9.01c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 227
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -3
Query: 398 NETRTPENGVSDRKLHRKKSSYKQGK 321
++T+T + VSD K+ KKS +K GK
Sbjct: 30 SDTKTLYSSVSDSKIGHKKSFHKDGK 55
>SPAC56F8.07 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 183
Score = 27.5 bits (58), Expect = 2.2
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 237 RFFLNIIVD-VTV*PFFWCVLIWFA-IFVKFPLFV*GFFSVKLSVRDPIFWGTCLVPL*H 410
RF+L+ D + + P W ++ + +F + P F+ ++ RDP+ W L+ H
Sbjct: 62 RFYLSTYEDPILLIPAPWKTALFSSELFFQVPFFIWVSLRLRKKARDPVLWVAILIYGVH 121
Query: 411 A 413
A
Sbjct: 122 A 122
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 27.5 bits (58), Expect = 2.2
Identities = 27/113 (23%), Positives = 40/113 (35%), Gaps = 9/113 (7%)
Frame = -3
Query: 362 RKLHRKKSSYKQGKLDKYGKP--NENTPKEWLNSYVNYNV-------KKEPENGDGVEEG 210
+ L K +D+YG+P + KE Y N E + + V
Sbjct: 51 KSLKEDKDFKTTASVDRYGRPLNQDKATKEIDRLYELENEGSSSSSESSEITDNEEVASA 110
Query: 209 SRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAE 51
S K T S ++ EV SE+ E+DA +T PE +E
Sbjct: 111 SSKSTKSEELTDEESEDEEVYDPARGEGIISTSESSDESDAESETEAQPEISE 163
>SPBC1718.04 |||glycerol-3-phosphate O-acyltransferase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 675
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 763 SGIQGXKEGMXTMHDI-LDAQWSYEXPKDETYXSSSNQTSRXPPDCSQKDI 614
S + + + +HD L+++ S P Y S N ++ P D +KDI
Sbjct: 583 SSVASDVDNLSQLHDTDLNSEVSAPAPLQNVYLYSPNPSALPPSDEEEKDI 633
>SPAC144.18 |||nucleotide sugar transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 5.2
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 289 VFSFGLPYLSSFPCLYEDFFL*SFRSETPFSG 384
+FSFGL LSS + D SF S+T SG
Sbjct: 134 LFSFGLMVLSSIVAAWADIQSSSFASQTLNSG 165
>SPAC27E2.12 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 76
Score = 25.8 bits (54), Expect = 6.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 278 ILLVCSHLVCHICQVSLVC 334
I LVC L C +C VS++C
Sbjct: 26 IFLVCYPLYCVVCFVSVLC 44
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 392 SRSIMTRFSFAATP*SH-EAIVDVVIRATANATASPLVVTITISWSTSMPS--SYLKIPG 562
S +T S +T ++ + VD+ TA++T T+S+ST +P+ S L P
Sbjct: 213 SSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVSTSEATVSFSTDIPATPSTLSSPA 272
Query: 563 NS 568
+S
Sbjct: 273 SS 274
>SPBC25D12.02c |dnt1||nucleolar protein Dnt1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 599
Score = 25.8 bits (54), Expect = 6.8
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Frame = -3
Query: 245 KEPENGDGVEEGSRKRTASTANAEDPDVSIEVKQEXXXXXXKRDSEAPAEADA----TMD 78
KE E DG+++ S + + + E P+ ++++EA E A +
Sbjct: 282 KESETIDGIDDKSLRSSTREVSVESPNEDSVNDDSSSDVSDEKETEAKHEIRAPAIIVRE 341
Query: 77 TSESPETAEQPADDS 33
TS P TA +D+
Sbjct: 342 TSSHPSTAVPSENDT 356
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 25.4 bits (53), Expect = 9.0
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 342 FFSVKLSVRDPIFWGTCLVPL*HASVSRLHHDRMRPS 452
+ + L D IF G L +SVS HH +RPS
Sbjct: 25 YLASSLMSHDSIFDGPGLGTSIPSSVSSFHHQTLRPS 61
>SPAC1486.03c |||RNA-binding splicing factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 797
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -3
Query: 272 NSYVNYNVKKEPENGDGVEEGSRKRTASTANAEDPDV 162
N YV+ N E +GD + E R R + ++ D+
Sbjct: 3 NEYVDMNSSSEDSDGDSILEEGRLRPSFRGQQKERDM 39
>SPAC458.05 |pik3|vps34|phosphatidylinositol 3-kinase
Pik3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 801
Score = 25.4 bits (53), Expect = 9.0
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 368 SDRKLHRKKSSYKQGKLDKYGKPNENTPKEWLNSYVNYNVKKE 240
++ K R S + G LDK KPN KE L S ++Y +E
Sbjct: 240 AELKHRRLVRSQRNGPLDKDLKPNSKIRKE-LESILSYPPSEE 281
>SPCC1840.02c |bgs4|orb11, cwg1|1,3-beta-glucan synthase subunit
Bgs4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1955
Score = 25.4 bits (53), Expect = 9.0
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +3
Query: 291 VLIWFAIFVKFPLFV*GFFSVKLSVRDPI 377
V+IW +F F +F + LS+RDPI
Sbjct: 687 VIIWVCVFTC--KFAESYFFLTLSIRDPI 713
>SPAC22G7.05 |||krr family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 389 RTPENGVSDRKLHRKKSSYKQGKLDKYGK 303
RTPE D+K + KK ++ K +GK
Sbjct: 570 RTPEEIARDKKKYGKKKRLREWKKQVFGK 598
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.4 bits (53), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 297 IWFAIFVKFPLFV*GFFSVKLSVRDPI 377
+W +F+ FV ++ + LSVRDPI
Sbjct: 599 LWITVFIA--KFVESYYFLTLSVRDPI 623
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,615,396
Number of Sequences: 5004
Number of extensions: 50289
Number of successful extensions: 192
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 369323696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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