Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_T7_A24
         (926 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035907-1|AAH35907.1|  308|Homo sapiens USP51 protein protein.        33   1.1  
AJ583823-1|CAE47750.2|  711|Homo sapiens ubiquitin specific prot...    33   1.1  

>BC035907-1|AAH35907.1|  308|Homo sapiens USP51 protein protein.
          Length = 308

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 27/79 (34%), Positives = 31/79 (39%)
 Frame = +1

Query: 265 SGSGVRSQVLERLEMRLRSGGGGARRPXCXLRH*XPXPQXXXPAHXRXRXPSXXTSXPXP 444
           S SG   +VL  + +R  S       P C  R   P PQ   P       P    S P P
Sbjct: 75  SSSGGDEKVLPSIPLRCHSSSS----PVCPRRKPRPRPQ---PRARSRSQPGL--SAPPP 125

Query: 445 XPSRXXPPLPPDXSPPXXR 501
            P+R  PP PP   PP  R
Sbjct: 126 PPARPPPP-PPPPPPPAPR 143


>AJ583823-1|CAE47750.2|  711|Homo sapiens ubiquitin specific
           proteinase 51 protein.
          Length = 711

 Score = 33.5 bits (73), Expect = 1.1
 Identities = 27/79 (34%), Positives = 31/79 (39%)
 Frame = +1

Query: 265 SGSGVRSQVLERLEMRLRSGGGGARRPXCXLRH*XPXPQXXXPAHXRXRXPSXXTSXPXP 444
           S SG   +VL  + +R  S       P C  R   P PQ   P       P    S P P
Sbjct: 75  SSSGGDEKVLPSIPLRCHSSSS----PVCPRRKPRPRPQ---PRARSRSQPGL--SAPPP 125

Query: 445 XPSRXXPPLPPDXSPPXXR 501
            P+R  PP PP   PP  R
Sbjct: 126 PPARPPPP-PPPPPPPAPR 143


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,045,214
Number of Sequences: 237096
Number of extensions: 815642
Number of successful extensions: 5128
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4798
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)