Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_P10
(731 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 31 0.71
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 1.2
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 1.2
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.2
07_01_0080 + 587674-588510 30 1.6
03_05_0067 - 20460206-20460703,20461255-20461530 29 2.9
03_06_0223 + 32481444-32482436 29 3.8
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012... 29 5.0
05_03_0627 - 16342211-16342264,16342332-16342412,16342751-163428... 29 5.0
01_06_1377 + 36764461-36765339 29 5.0
12_02_0299 - 17051570-17052474,17053542-17053755 28 6.6
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317... 28 6.6
06_01_0931 + 7192519-7194075 28 6.6
01_05_0552 - 23173106-23173184,23173266-23173411,23173543-231740... 28 6.6
01_03_0005 + 11568545-11569119,11569179-11569191 28 6.6
12_01_0526 - 4171313-4171417,4171514-4171597,4171688-4171758,417... 28 8.8
09_02_0327 - 7284829-7284889,7284946-7286126 28 8.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 8.8
07_03_0890 - 22332768-22333382 28 8.8
07_03_0435 + 18182657-18183509,18184477-18184574,18184663-181848... 28 8.8
05_06_0026 - 25024807-25025300,25025432-25025495,25025567-250256... 28 8.8
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 28 8.8
02_05_0201 + 26687369-26689228 28 8.8
02_04_0400 - 22608519-22608844,22609044-22609122 28 8.8
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108 28 8.8
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 31.5 bits (68), Expect = 0.71
Identities = 21/82 (25%), Positives = 24/82 (29%), Gaps = 4/82 (4%)
Frame = +3
Query: 405 PPPXXKXXXFCGXPPPPPX--XKKKKXXFFFFXXPPPXXFXXPXXXXFFXXXXXXXXXXX 578
PPP F PPPPP + F F PP P ++
Sbjct: 42 PPPQGAPPPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGV 101
Query: 579 GGXXXAPPPXXXXXXXP--PPP 638
PPP P PPP
Sbjct: 102 NSSQPPPPPPPPPSPPPSAPPP 123
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 583 GXXXPPPPXXKXXXPPPPP 639
G PPPP K PPPPP
Sbjct: 622 GAPPPPPPPGKPGGPPPPP 640
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 580 GGXXXPPPPXXKXXXPPPPP 639
G PPPP PPPPP
Sbjct: 622 GAPPPPPPPGKPGGPPPPPP 641
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 583 GXXXPPPPXXKXXXPPPPP 639
G PPPP K PPPPP
Sbjct: 927 GAPPPPPPPGKPGGPPPPP 945
Score = 28.3 bits (60), Expect = 6.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 580 GGXXXPPPPXXKXXXPPPPP 639
G PPPP PPPPP
Sbjct: 927 GAPPPPPPPGKPGGPPPPPP 946
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +1
Query: 499 PPPPXXXXXPXXXFFFXXXXXXXXXXGGGXXXPPPPXXKXXXPPPPP 639
PPPP P G PPPP K PPPPP
Sbjct: 338 PPPPKGPPPPPPA---KGPPPPPPPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP K PPPPP
Sbjct: 327 PPPPPPKAAPPPPPP 341
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/78 (25%), Positives = 20/78 (25%)
Frame = +3
Query: 405 PPPXXKXXXFCGXPPPPPXXKKKKXXFFFFXXPPPXXFXXPXXXXFFXXXXXXXXXXXGG 584
PPP PPPPP K PPP P GG
Sbjct: 313 PPPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGG 372
Query: 585 XXXAPPPXXXXXXXPPPP 638
PPP PP
Sbjct: 373 KKGGPPPPPPKGGASRPP 390
>07_01_0080 + 587674-588510
Length = 278
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 580 GGXXXPPPPXXKXXXPPPPPXF 645
G PPPP PPPPP F
Sbjct: 102 GSPPPPPPPPPPPPPPPPPPLF 123
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 583 GXXXPPPPXXKXXXPPPPPXFF 648
G PPPP PPPPP F
Sbjct: 102 GSPPPPPPPPPPPPPPPPPPLF 123
>03_05_0067 - 20460206-20460703,20461255-20461530
Length = 257
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPPXFF 648
PPPP PPPPP +F
Sbjct: 4 PPPPPQWAMGPPPPPQYF 21
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPPXFF 648
PPP + PPPPP +F
Sbjct: 16 PPPQYFQAGPPPPPPQYF 33
>03_06_0223 + 32481444-32482436
Length = 330
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1
Query: 650 KKKXGGGGGXXXXXXGGGGXXXPPP 576
K+ GGGGG GGG PPP
Sbjct: 10 KRTGGGGGGDGDIESGGGVEMAPPP 34
>09_04_0081 -
14400293-14400397,14400953-14401036,14401144-14401214,
14401293-14401380,14401487-14401678,14401772-14402704
Length = 490
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 577 GGGXXXPPPPXXKXXXPPPPP 639
G G PPP K PPPPP
Sbjct: 135 GPGQEPPPPHVPKAAPPPPPP 155
>05_03_0627 -
16342211-16342264,16342332-16342412,16342751-16342849,
16343660-16343770,16343964-16344116,16344741-16344881,
16345456-16345513,16345852-16345967,16346292-16346405,
16346496-16346557,16348788-16348930,16349030-16349097,
16349200-16349379,16349835-16350013,16350447-16350636,
16350920-16350978,16351421-16351574,16352133-16352158,
16352567-16353014
Length = 811
Score = 28.7 bits (61), Expect = 5.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 577 GGGXXXPPPPXXKXXXPPPPP 639
GGG PP K PPPPP
Sbjct: 55 GGGGRAPPRAAGKSPAPPPPP 75
>01_06_1377 + 36764461-36765339
Length = 292
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/54 (27%), Positives = 19/54 (35%)
Frame = +3
Query: 444 PPPPPXXKKKKXXFFFFXXPPPXXFXXPXXXXFFXXXXXXXXXXXGGXXXAPPP 605
PPP P ++F PPP + P + GG APPP
Sbjct: 156 PPPEPQYPPPSSSPYYFPPPPPPAYSAPPPPQY----GSEQYYRSGGYYSAPPP 205
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 28.3 bits (60), Expect = 6.6
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +1
Query: 499 PPPPXXXXXPXXXFFFXXXXXXXXXXGGGXXXPPPPXXKXXXPPPPPXF 645
PP P P F F P PP PPPPP F
Sbjct: 286 PPSPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSF 334
>07_03_1573 +
27829967-27830338,27830821-27831510,27831594-27831781,
27832286-27832318,27832364-27832605,27833178-27833320,
27833649-27833825,27834104-27834256,27834639-27834694,
27834998-27835157,27835301-27835348
Length = 753
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 36 PPPPPPRRRTPPPPP 50
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 37 PPPPPRRRTPPPPPP 51
>06_01_0931 + 7192519-7194075
Length = 518
Score = 28.3 bits (60), Expect = 6.6
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 132 PPPPPPRSQAPPPPP 146
>01_05_0552 -
23173106-23173184,23173266-23173411,23173543-23174022,
23174106-23174161,23175538-23175637,23175708-23175765,
23176163-23176278,23176915-23176974,23177297-23177383,
23178250-23178341,23178409-23178587,23178946-23179087,
23179655-23179706,23180241-23180473,23180569-23180745,
23180882-23181044,23181242-23181392,23181493-23181574,
23182193-23182332,23182499-23183013
Length = 1035
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -1
Query: 644 KXGGGGGXXXXXXGGGGXXXPP 579
+ GGGGG GGGG PP
Sbjct: 104 RGGGGGGGGGGGGGGGGSQQPP 125
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 638 GGGGGXXXXXXGGGGXXXPPP 576
GGGGG GGG PPP
Sbjct: 122 GGGGGWQQGGGGGGAYPTPPP 142
>12_01_0526 -
4171313-4171417,4171514-4171597,4171688-4171758,
4171814-4171891,4174482-4174569,4174659-4174850,
4174939-4175802
Length = 493
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 148 PPPPPPQESTPPPPP 162
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 149 PPPPPQESTPPPPPP 163
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/50 (26%), Positives = 16/50 (32%)
Frame = +1
Query: 499 PPPPXXXXXPXXXFFFXXXXXXXXXXGGGXXXPPPPXXKXXXPPPPPXFF 648
PPPP P ++ P PP + PP PP F
Sbjct: 58 PPPPPPPPPPRGRRYYRRVSGDDLDVPSCSSSPSPPSDEENPPPNPPSLF 107
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +1
Query: 499 PPPPXXXXXPXXXFFFXXXXXXXXXXGGGXXXPPPPXXKXXXPPPPP 639
PPPP P PPPP PPPPP
Sbjct: 1138 PPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPP 1184
>07_03_0890 - 22332768-22333382
Length = 204
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 75 PPPPPAEATPPPPPP 89
>07_03_0435 +
18182657-18183509,18184477-18184574,18184663-18184833,
18185524-18185624,18185702-18185837,18186007-18186057,
18186202-18186489,18186610-18186844,18186924-18187204,
18187336-18187557
Length = 811
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 638 GGGGGXXXXXXGGGGXXXPP 579
GGGGG GGGG PP
Sbjct: 13 GGGGGGGDGDGGGGGRAVPP 32
>05_06_0026 -
25024807-25025300,25025432-25025495,25025567-25025662,
25025719-25025929,25026616-25026690,25026820-25027037
Length = 385
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 18 PPPPPVQVPVPPPPP 32
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 27.9 bits (59), Expect = 8.8
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 595 PPPPXXKXXXPPPPP 639
PPPP + PPPPP
Sbjct: 55 PPPPPTQPAPPPPPP 69
>02_05_0201 + 26687369-26689228
Length = 619
Score = 27.9 bits (59), Expect = 8.8
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 580 GGXXXPPPPXXKXXXPPPPP 639
G PPPP PPPPP
Sbjct: 7 GSHRPPPPPQSLRLVPPPPP 26
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -1
Query: 638 GGGGGXXXXXXGGGGXXXPP 579
GGGGG GGGG PP
Sbjct: 77 GGGGGGGGGGGGGGGGYYPP 96
>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
Length = 139
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 625 PPPPPXFFXXXXXXXXXKXXXXXXGGGGXXXPXGG 729
PPPPP FF GGGG GG
Sbjct: 36 PPPPPPFFPPQWAPPVAGGGGPFAGGGGYGSGAGG 70
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,838,905
Number of Sequences: 37544
Number of extensions: 476361
Number of successful extensions: 4705
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3342
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1921741964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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