Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_P04
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 69 4e-14
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 67 2e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 64 2e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 64 2e-12
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 63 3e-12
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 63 4e-12
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 63 4e-12
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 62 5e-12
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 62 5e-12
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 62 9e-12
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 62 9e-12
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 61 1e-11
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 61 1e-11
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 59 5e-11
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 59 6e-11
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 56 6e-10
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 54 2e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 2e-08
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 48 1e-07
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 45 8e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 44 1e-06
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 43 3e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 41 1e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 38 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 37 2e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 36 5e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 35 0.001
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 32 0.008
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 31 0.014
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.10
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 22 8.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 69.3 bits (162), Expect = 4e-14
Identities = 42/159 (26%), Positives = 79/159 (49%), Gaps = 11/159 (6%)
Frame = +1
Query: 178 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 351
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 352 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 519
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 520 KFGSRMHNSDEMDFVI--DKRIYSM---FESGAWDVTDL 621
KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 67.3 bits (157), Expect = 2e-13
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Frame = +1
Query: 82 IASAAECENATSLSLMIDSLLATHDRESPPDSK----IVVNLTLHLRHA---NIRESEST 240
I SA C + D LL+ ++R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 241 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 414
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 415 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 558
+ G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.1 bits (149), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 64.1 bits (149), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 63.7 bits (148), Expect = 2e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 63.3 bits (147), Expect = 3e-12
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 9/162 (5%)
Frame = +1
Query: 100 CENATSLSLMIDSLLATHDRESPPDSKIVVNLTLHLR-------HANIRESESTVRILAD 258
C + D LL+ +++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 259 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 432
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 433 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 558
V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 62.9 bits (146), Expect = 4e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 62.9 bits (146), Expect = 4e-12
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 10/154 (6%)
Frame = +1
Query: 127 MIDSLLATHDRESPPDSKIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 291
+ D LL+ ++R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 292 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLD 456
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 457 ISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 558
+ + ++ +P D Q+C KFGS +N ++D
Sbjct: 154 YKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 62.5 bits (145), Expect = 5e-12
Identities = 33/119 (27%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 62.5 bits (145), Expect = 5e-12
Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 8/170 (4%)
Frame = +1
Query: 103 ENATSLSLMIDSLLATHDRESPPDS--KIVVNLTLHL--RHANIRESESTVRILADLQMN 270
++ T+L + L +D P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 271 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 438
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 439 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYSM 588
+ + + +WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 61.7 bits (143), Expect = 9e-12
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 61.7 bits (143), Expect = 9e-12
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Frame = +1
Query: 106 NATSLSLMIDSLLATHDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 273
N +++S ++D+LL +D PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 274 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 444
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 445 KRLDISTPISMQLDNWPNDMQTCTFKFGS 531
RL I M L+N+P D Q C +FGS
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 32/119 (26%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Frame = +1
Query: 217 NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA- 390
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 391 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVI 567
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 61.3 bits (142), Expect = 1e-11
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
Frame = +1
Query: 178 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 351
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 352 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 528
PD+VL N A A +A + + G V W + + ++ +P D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 529 SRMHNSDEMD 558
S ++ ++D
Sbjct: 173 SWTYDGFKVD 182
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 61.3 bits (142), Expect = 1e-11
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Frame = +1
Query: 259 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 432
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 433 VSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYSMFESG 600
++ + + + +P D Q C KFGS ++ ++D + I S +G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 601 AWDV 612
WD+
Sbjct: 196 EWDL 199
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 59.3 bits (137), Expect = 5e-11
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 12/174 (6%)
Frame = +1
Query: 73 TCAIASAAECENATSLSLMIDSLLATHDRESPP----DSKIVVNLTLHLRH---ANIRES 231
+C +A + + D LL+ ++R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 232 ESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 405
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 406 ---RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 558
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 58.8 bits (136), Expect = 6e-11
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Frame = +1
Query: 178 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 351
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 352 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTF 519
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+QTC
Sbjct: 113 PDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 520 KFGSRMHNSDEMD 558
K GS ++ ++D
Sbjct: 170 KLGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 55.6 bits (128), Expect = 6e-10
Identities = 45/196 (22%), Positives = 90/196 (45%), Gaps = 14/196 (7%)
Frame = +1
Query: 100 CENATSLSLMIDS---LLATHDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 264
C++ TS S + L +DR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 265 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 435
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 436 SWIKRLDISTPISMQLDN--WPNDMQTCTFKFGSRMHNSDEM---DFVIDKRIYSMFESG 600
+ TP+ + D+ WP D+ CT S H S+E+ ++ + M+ +
Sbjct: 148 LCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIASWSHGSNEIKLNSLDTEQILDDMYNNN 205
Query: 601 A-WDVTDLSXAXXSQD 645
W++ +S + + D
Sbjct: 206 TEWEIVHMSHSESTID 221
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 3/129 (2%)
Frame = +1
Query: 181 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 357
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 358 VVLLNAAATTAGDYALRARV--SNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 531
+L N A + V S+ G V W+ + + ++ +P D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
Query: 532 RMHNSDEMD 558
++ +++
Sbjct: 152 WTYDGYQLE 160
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 50.4 bits (115), Expect = 2e-08
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 8/147 (5%)
Frame = +1
Query: 115 SLSLMIDSLLATHDRESPPD----SKIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 279
++++++++LL ++ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 280 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKR 450
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 451 LDISTPISMQLDNWPNDMQTCTFKFGS 531
L I M+L N+P D Q+C GS
Sbjct: 156 LTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 48.0 bits (109), Expect = 1e-07
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 6/141 (4%)
Frame = +1
Query: 160 ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLV 330
E+ D +V + L +R A I + + + + W+D+RL +N G T L
Sbjct: 52 ENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LT 110
Query: 331 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 501
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 111 DASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLD 170
Query: 502 MQTCTFKFGSRMHNSDEMDFV 564
Q C+ + S +D++ F+
Sbjct: 171 RQVCSLRMASYGWTTDDLVFL 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 45.2 bits (102), Expect = 8e-07
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Frame = +1
Query: 160 ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLSWN--AGEWGCSTWLV 330
E+ D VV + + +R + I + + + W+D+RL +N G T L
Sbjct: 52 ENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LT 110
Query: 331 SSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPND 501
+ R+W PD+ N + + R+ NGSV + R+ ++ M L +P D
Sbjct: 111 DASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLD 170
Query: 502 MQTCTFKFGSRMHNSDEMDFV 564
Q C+ + S +D++ F+
Sbjct: 171 RQVCSLRMASYGWTTDDLVFL 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 44.4 bits (100), Expect = 1e-06
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 13/155 (8%)
Frame = +1
Query: 106 NATSLSLMIDSLLATHDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 273
N ++S ++DS ++D+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 274 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 426
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 427 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 531
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 43.2 bits (97), Expect = 3e-06
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 13/155 (8%)
Frame = +1
Query: 106 NATSLSLMIDSLLATHDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 273
N ++S ++DS ++D+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 274 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 426
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 427 GSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 531
GS++ RL I+ M L +P D Q C + S
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 41.1 bits (92), Expect = 1e-05
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 220 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 399
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 400 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 531
R R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.5 bits (83), Expect = 2e-04
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 9/96 (9%)
Frame = +1
Query: 271 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 423
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 424 NGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 531
+GS++ RL I+ M L +P D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 37.1 bits (82), Expect = 2e-04
Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Frame = +1
Query: 229 SESTVRILAD--LQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGD 396
+E ++ +AD L +W D RL N E + +WRPD NA T +
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTFHE 104
Query: 397 YALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 564
++ + ++ ++ ++ +L + +M+ +++P+D Q C+ S H + ++ F+
Sbjct: 105 MSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 35.9 bits (79), Expect = 5e-04
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 3/81 (3%)
Frame = +1
Query: 337 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 507
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 508 TCTFKFGSRMHNSDEMDFVID 570
C + S H +DEM F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +1
Query: 103 ENATSLSLMIDSLLAT--HDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 267
E+ S ++D+LL + +D+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 268 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 438
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 439 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 564
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +1
Query: 103 ENATSLSLMIDSLLAT--HDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 267
E+ S ++D+LL + +D+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 268 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 438
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 439 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 564
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.7 bits (76), Expect = 0.001
Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 8/162 (4%)
Frame = +1
Query: 103 ENATSLSLMIDSLLAT--HDRE--SPPDSKIVVNLT-LHLRHANIRESESTVRILADLQM 267
E+ S ++D+LL + +D+ P + VN++ L L A+ ES + LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 268 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 438
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 439 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFV 564
++ R + +L+ +P D C+F S + + +V
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAIESISYEQTAITYV 217
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.9 bits (69), Expect = 0.008
Identities = 29/132 (21%), Positives = 55/132 (41%), Gaps = 4/132 (3%)
Frame = +1
Query: 181 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 354
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 355 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFG 528
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 529 SRMHNSDEMDFV 564
S + + +V
Sbjct: 257 SISYEQTAITYV 268
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 31.1 bits (67), Expect = 0.014
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
Frame = +1
Query: 343 LWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 513
+W P V + N ++A T + + + +G V RL + ++L+ +P D+Q C
Sbjct: 97 IWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDVQEC 156
Query: 514 TFKFGSRMHNSDEM 555
F S HN +M
Sbjct: 157 PLIFESWTHNVLDM 170
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.10
Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 11/136 (8%)
Frame = +1
Query: 181 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 342
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 343 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPNDMQ 507
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 508 TCTFKFGSRMHNSDEM 555
C S ++ ++
Sbjct: 129 ICPIYIESFSYHKQKL 144
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.8
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 324 PSAAAPFPCVPTQS 283
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.8 bits (44), Expect = 8.8
Identities = 7/27 (25%), Positives = 17/27 (62%)
Frame = -1
Query: 164 DSRSCVARSESIMRDSDVAFSHSAALA 84
DS+ C + IM+D+ + ++H+ ++
Sbjct: 202 DSKECSNQEYEIMKDNLLLYNHARLMS 228
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,533
Number of Sequences: 438
Number of extensions: 4745
Number of successful extensions: 93
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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