Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_P02
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 96 3e-20
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 77 2e-14
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 61 1e-09
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 54 2e-07
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 45 6e-05
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 45 6e-05
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 45 8e-05
AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical ... 42 8e-04
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 38 0.007
U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical pr... 31 0.80
Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-... 30 2.4
U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-... 30 2.4
Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF059608-1|AAD13737.1| 526|Caenorhabditis elegans N2,N2-dimethy... 29 4.3
Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical pr... 28 7.5
U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 28 9.9
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 9.9
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 28 9.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 9.9
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 9.9
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 9.9
U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical pr... 28 9.9
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 28 9.9
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 28 9.9
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 28 9.9
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/144 (36%), Positives = 83/144 (57%), Gaps = 2/144 (1%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSWPRHVTAG 273
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 274 VPQGSALSPLLFSLYINDIPRSPETHLAL--FADDTAIYYSCRKKALLHRRLQTAATTMG 447
VPQG+ LSPLLF +Y+NDI +A FADDT +Y S K LQ+A +
Sbjct: 77 VPQGAVLSPLLFGIYVNDISSILPEKVACKQFADDTKLYAS-TPKTESENNLQSALDAVV 135
Query: 448 QWFRKWRIDINPTKSTAVLFKRGR 519
W + ++ +N +K+ V + R
Sbjct: 136 DWTKGSKLTLNQSKTVHVTVGKRR 159
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 76.6 bits (180), Expect = 2e-14
Identities = 52/169 (30%), Positives = 83/169 (49%), Gaps = 3/169 (1%)
Frame = +1
Query: 10 HSCVHQVHRLTEHILLGLNRRKPIPTGALF--FDIAKAFDKVWHNGLIYKLYN-MGVPDR 180
HS V ++T I+ GLN + P P A+ D+ AFDKV L L G+ +
Sbjct: 443 HSTTTAVIQVTNDIIGGLNMKNP-PERAIMACLDLRAAFDKVPTKKLCNDLMEAQGIEPK 501
Query: 181 LVLIIRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYINDIPRSPETHLAL 360
+ L + +YL R R + S + GVPQGS +SP LF+ Y+ D+P +T L
Sbjct: 502 IKLWLGNYLHKRLIRTSHDNHWSKWHTLLGGVPQGSVISPNLFTFYLKDMPTQQDTMLIS 561
Query: 361 FADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKSTAVLF 507
+ADD +I +K ++Q + ++ ++ + I+ KST +F
Sbjct: 562 YADDMSIIARDKKIEKAAEKVQLHIDEIAKYLKERGMSISAEKSTVTVF 610
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 60.9 bits (141), Expect = 1e-09
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Frame = +1
Query: 112 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSWPRH-VTAGVPQGS 288
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 289 ALSPLLFSLYINDIPRS--PETHLALFADDTAIY 384
P LF ++IN + S P + FADD +Y
Sbjct: 62 VSGPFLFLIFINSLLLSVPPSISCSAFADDLKVY 95
Score = 28.7 bits (61), Expect = 5.7
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Frame = +2
Query: 590 PITMYD-QPIPWAPK--VKYLGVTLSSRMTFRPHIKTV 694
P T+Y +P +P + LG+ S++TF+PHIK +
Sbjct: 178 PKTVYKINNLPISPSNIARDLGILTDSKLTFKPHIKKI 215
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 53.6 bits (123), Expect = 2e-07
Identities = 40/136 (29%), Positives = 69/136 (50%), Gaps = 5/136 (3%)
Frame = +1
Query: 151 KLYNMGVPDRLVLIIRDYLSNRSFRYRVE---GTRSWPRHVTAGVPQGSALSPLLFSLYI 321
KL G+ +++L NR+F ++ S+P +++GVPQGS PLLF L+I
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYP--ISSGVPQGSVSGPLLFILFI 896
Query: 322 ND--IPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPTKST 495
N+ I +P +++ FADD I+++ +Q + + W + + + PTKS
Sbjct: 897 NNLLIDLAPTINISCFADDVKIFHTD------PTIIQNSIDIIVSWSKLNELPLAPTKS- 949
Query: 496 AVLFKRGRPPNTTLSI 543
A+L R N + S+
Sbjct: 950 ALLALGTRNKNQSYSV 965
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 192
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 664 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 721
Query: 193 IRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 722 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 768
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 45.2 bits (102), Expect = 6e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 192
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 403 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDSVEHQAIWKSLDEQGADGAYIDL 460
Query: 193 IRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 461 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 507
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 44.8 bits (101), Expect = 8e-05
Identities = 32/108 (29%), Positives = 47/108 (43%)
Frame = +1
Query: 13 SCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLI 192
S + +H L LL + R IP +F D KAFD V H + L G + +
Sbjct: 493 STIDHIHSLQR--LLEVGREYQIPLTLVFIDFKKAFDTVEHQAIWKSLDEQGADGAYIDL 550
Query: 193 IRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYINDIPR 336
+++ N + + R VT GV QG +SP LFS + + R
Sbjct: 551 LKECYKNCTTNF-TPFHRPVAVPVTKGVRQGDPISPNLFSACLEHVFR 597
>AL110477-8|CAB76739.1| 1042|Caenorhabditis elegans Hypothetical
protein Y113G7B.12 protein.
Length = 1042
Score = 41.5 bits (93), Expect = 8e-04
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSWPRH-VTA 270
+ F ++ AFDKV H LI KL + V L R +S ++F +V +H
Sbjct: 890 IHFKLSTAFDKVPHEFLISKLNDFNVHPTLRNWFRKLMSPKTFSVQVNDHLESEKHNCQI 949
Query: 271 GVPQGSALSPLLFSLYIN----DIPRSPETHLALFADDTAIY 384
G P+GS +F ++IN +IP + ++D IY
Sbjct: 950 GAPRGSESRQFMFLVFINSLLCEIPINISCSACAISEDLEIY 991
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 38.3 bits (85), Expect = 0.007
Identities = 24/81 (29%), Positives = 37/81 (45%)
Frame = +1
Query: 94 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSWPRHVTAG 273
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 274 VPQGSALSPLLFSLYINDIPR 336
V QG +SP LFS + + R
Sbjct: 99 VRQGDPISPNLFSACLEHVFR 119
>U67948-3|AAM51499.1| 1077|Caenorhabditis elegans Hypothetical protein
M02E1.1a protein.
Length = 1077
Score = 31.5 bits (68), Expect = 0.80
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 572 PPPAVRPITMYDQPIPWAPKVKYLGVTLSSRMTFRPHIKTVRDRA 706
PP VRP T +D IP+ ++G + T + R RA
Sbjct: 901 PPSVVRPRTAFDMNIPYGTDSNFIGAKQFKKNTLSVEMTNARQRA 945
>Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical
protein DY3.4b protein.
Length = 507
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 181 LVLIIRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYIND 327
L +IR LS ++ Y+ G SW +T GVPQG +S L +Y+N+
Sbjct: 362 LYSVIRTTLS--TYYYK-RGPTSW--RITKGVPQGHPISSNLAHMYLNN 405
>Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical
protein DY3.4a protein.
Length = 561
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +1
Query: 181 LVLIIRDYLSNRSFRYRVEGTRSWPRHVTAGVPQGSALSPLLFSLYIND 327
L +IR LS ++ Y+ G SW +T GVPQG +S L +Y+N+
Sbjct: 416 LYSVIRTTLS--TYYYK-RGPTSW--RITKGVPQGHPISSNLAHMYLNN 459
>U40410-3|AAL27230.1| 1169|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform b protein.
Length = 1169
Score = 29.9 bits (64), Expect = 2.4
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +2
Query: 170 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESLKAPPSPRYYSVCISTIYP 334
C GS C S C ++D+ + E VP P TSQP + + PP+ V I T+ P
Sbjct: 306 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 364
Query: 335 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 445
R P +T PP T V + F RP +P +
Sbjct: 365 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 400
>U40410-2|AAL27229.1| 1876|Caenorhabditis elegans Lin-12 and glp-1
x-hybridizingprotein 1, isoform a protein.
Length = 1876
Score = 29.9 bits (64), Expect = 2.4
Identities = 32/98 (32%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +2
Query: 170 CQTGS-CSSYETTCRT-VRSDIESRE--RVPGPVTSQP-ESLKAPPSPRYYSVCISTIYP 334
C GS C S C ++D+ + E VP P TSQP + + PP+ V I T+ P
Sbjct: 403 CGKGSICDSVIPVCVCPAQTDLSNGECISVPAP-TSQPVQVMTPPPTLPPVQVPIQTLPP 461
Query: 335 GLRRPIWRSSPMT-PPSTTRVGRRRCFIDDFRPQLPPW 445
R P +T PP T V + F RP +P +
Sbjct: 462 QTRPPQLPPVQITQPPIQTPV--QPIFFQTTRPPMPTY 497
>Z77136-4|CAB00881.1| 526|Caenorhabditis elegans Hypothetical
protein ZC376.5 protein.
Length = 526
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 499 VLFKRGRPPNTTLSIPLPTRRVNNPAPGRSXNHDVRPAHTVGP 627
VL KRG N +PT R + PG H + P H +GP
Sbjct: 296 VLLKRGEG-NQQSKYSIPTVRHSISGPGNRCIHCLLPLHQIGP 337
>AF059608-1|AAD13737.1| 526|Caenorhabditis elegans
N2,N2-dimethylguanosine tRNA methyltransferase protein.
Length = 526
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 20/43 (46%)
Frame = +1
Query: 499 VLFKRGRPPNTTLSIPLPTRRVNNPAPGRSXNHDVRPAHTVGP 627
VL KRG N +PT R + PG H + P H +GP
Sbjct: 296 VLLKRGEG-NQQSKYSIPTVRHSISGPGNRCIHCLLPLHQIGP 337
>Z74029-5|CAA98433.2| 520|Caenorhabditis elegans Hypothetical
protein C45B11.1b protein.
Length = 520
Score = 28.7 bits (61), Expect = 5.7
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +1
Query: 517 RPPNTTLSIPLPTRRVNNPAPGRSXNHDVRPAHTVGPEGQI-FRRHPLQ*DDIPPPHQDG 693
R P++ + PLP N+P P + ++ +R + T P + RH + +PP Q G
Sbjct: 79 RGPSSRYNSPLPFGMTNSPMPSVARSNSLRISATASPVVNVSSARHSFR-PTLPPVSQRG 137
>Z81553-9|CAB04500.2| 663|Caenorhabditis elegans Hypothetical
protein F56H6.11 protein.
Length = 663
Score = 28.3 bits (60), Expect = 7.5
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = -2
Query: 566 LTRLVGRGMLSVVFGGRPLLKSTAVLFVGLMSMRHFRNHCPM 441
LT VG G+L ++ PLL + + ++G +S + H P+
Sbjct: 275 LTATVGTGLLMLLSENNPLLSNKVLTYIGDISYSLYLVHWPI 316
>U23452-5|AAK31546.1| 304|Caenorhabditis elegans Hypothetical
protein R07G3.6 protein.
Length = 304
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = +2
Query: 254 PVTSQPESLKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVGR 400
P T+ + +P + +S +P LRR +S P PP+TT R
Sbjct: 131 PTTTTTPAPTTTTTPNFLEKSLSMFFPSLRRKP-QSIPTLPPTTTPTPR 178
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.9 bits (59), Expect = 9.9
Identities = 41/142 (28%), Positives = 52/142 (36%), Gaps = 4/142 (2%)
Frame = +2
Query: 218 RSDIESRERVPGPVTSQPESLKAPPSPRYYSVCISTIYPGLRRPIWRSSPMTPPSTTRVG 397
RS RE P P + K+PP+P+ + S P RR R SP S
Sbjct: 398 RSPAPKREIPPARRRRSPSASKSPPAPK-RAKSRSKSPPAPRR---RRSPSQSKSPAPRR 453
Query: 398 RRRCFIDDFRP--QLPPWDSGSGSGASTLTPRKAQRCSSKGVALRTP--R*ASLSRLGAS 565
RR P + P S S S +P A R R+P R + S +
Sbjct: 454 RRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSR 513
Query: 566 ITPPPAVRPITMYDQPIPWAPK 631
PPP RP +Q P A K
Sbjct: 514 SPPPPPRRPRQDSEQQAPVAVK 535
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 9 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 110
T RP+S+P H AE A H+++S + ++
Sbjct: 107 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 140
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.9 bits (59), Expect = 9.9
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 9 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 110
T RP+S+P H AE A H+++S + ++
Sbjct: 226 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 259
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.9 bits (59), Expect = 9.9
Identities = 36/164 (21%), Positives = 59/164 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESLKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 337 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 396
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 397 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 456
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPAVRPITMYDQPIP 619
+Q G +L T ++ S S P T+ +P P
Sbjct: 457 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEPSP 498
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical protein
K06A9.1a protein.
Length = 1032
Score = 27.9 bits (59), Expect = 9.9
Identities = 36/164 (21%), Positives = 59/164 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESLKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPAVRPITMYDQPIP 619
+Q G +L T ++ S S P T+ +P P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEPSP 705
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 27.9 bits (59), Expect = 9.9
Identities = 36/164 (21%), Positives = 59/164 (35%)
Frame = +2
Query: 128 SGTTV*YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESLKAPPSPRYY 307
+G+T+ + + T S S+ + T +S + S PG ++ P S PS +
Sbjct: 544 TGSTITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSP 603
Query: 308 SVCISTIYPGLRRPIWRSSPMTPPSTTRVGRRRCFIDDFRPQLPPWDSGSGSGASTLTPR 487
+ + P S M P S+T G + I +GS S T
Sbjct: 604 APNTGSTTPSQTSSQSPSPSMNPSSSTPTGSSQSTITPEGSTASSPTGSTGSTFSVATEV 663
Query: 488 KAQRCSSKGVALRTPR*ASLSRLGASITPPPAVRPITMYDQPIP 619
+Q G +L T ++ S S P T+ +P P
Sbjct: 664 TSQSTVPSGSSLGTQ--STNSSPSPSSLSPSTSGMSTLTSEPSP 705
>U41557-1|AAA83300.1| 418|Caenorhabditis elegans Hypothetical
protein C50F7.6 protein.
Length = 418
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +2
Query: 152 NCITWECQTGSCSS-YETTCRTVRSDIESRERVPGPVTSQPESLKAPPSPRYYSVCISTI 328
+C W SS Y T + RS + + V P TS + +++ PSPR +
Sbjct: 44 SCSGWPNGAADTSSAYNTGGESCRSVSVTPDGVFIPTTSNSQMIQSQPSPRVLRRTVKMA 103
Query: 329 YPGLRR 346
P ++R
Sbjct: 104 SPAVQR 109
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 508 KRGRPPNTTLSIPLPTRRVNNPAPGRSXNHDV-RPAHTVGPEGQIFRRHPLQ*DDIPPPH 684
K +PP + +PLP RR +PAP R H + +P P P +PPP
Sbjct: 233 KTTKPPQHLIILPLPPRRA-SPAPPRVIPHVIMQPPRPRPPISTADLCTPAF-QQLPPPR 290
Query: 685 QD 690
++
Sbjct: 291 EE 292
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Frame = +1
Query: 322 NDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPT----- 486
ND+P+ + +L L D+ YY KK+++ + + + F K DI+P
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQ-SREFQKLTKPFDKHEFDISPAVVNAF 643
Query: 487 ---KSTAVLFKRG--RPPNTTLSIPLPTRRVNNPAPGRSXNHDV 603
+ A+ F G +PP + + P + VN A G H++
Sbjct: 644 YSPEKNAITFPAGILQPPFFSGTFP---KAVNYGAIGAVIGHEI 684
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 27.9 bits (59), Expect = 9.9
Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Frame = +1
Query: 322 NDIPRSPETHLALFADDTAIYYSCRKKALLHRRLQTAATTMGQWFRKWRIDINPT----- 486
ND+P+ + +L L D+ YY KK+++ + + + F K DI+P
Sbjct: 585 NDLPKLDKQYLGLSISDSDTYYYIMKKSVVWMQ-SREFQKLTKPFDKHEFDISPAVVNAF 643
Query: 487 ---KSTAVLFKRG--RPPNTTLSIPLPTRRVNNPAPGRSXNHDV 603
+ A+ F G +PP + + P + VN A G H++
Sbjct: 644 YSPEKNAITFPAGILQPPFFSGTFP---KAVNYGAIGAVIGHEI 684
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,927,284
Number of Sequences: 27780
Number of extensions: 510293
Number of successful extensions: 1689
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1683
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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