Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_O15
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    82   6e-18
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   2.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   2.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.6  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   8.3  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 82.2 bits (194), Expect = 6e-18
 Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 2/229 (0%)
 Frame = +2

Query: 113 MGCGTSFVKYXXXXXXXXXXXXXXXXXXXXXXXXMNWTMVKDLLKTHLAVGPWIFIVVGA 292
           M CG   +KY                        +    V   ++T LA      IV+G+
Sbjct: 1   MSCGMGMIKYLLFIFNFVFAVCGLGILTLGVLIHLQILGVSKQIETGLAFPSITLIVLGS 60

Query: 293 VMFVIAFLGCCGAIRESHCMVVTYAXXXXXXXXXXXXXXXXXFTYGESIKESIMDGVGVL 472
           ++FVI+F GCCGAIRESHCM +T+A                 F   ++  +     +   
Sbjct: 61  IIFVISFFGCCGAIRESHCMTITFASFLLFILLVQIAVAVYAFIVVKN--DDNFRNISEK 118

Query: 473 FKKRSDANADEAAEAVFSE-LQRQFECCGNTGAINYGQFTLPESCCVKKSILSTFAGNNC 649
           +++  +     +    F + +Q+  +CCG     +Y    +P SCC      ++   N C
Sbjct: 119 YQEIFNGYFLNSESKDFIDFIQKNLQCCGVHSLSDYNDKPIPASCC------NSPENNTC 172

Query: 650 TV-DAANPGCGPQIGELYQKWNKPIAGVALGVACVEVVXTLXXLCLXNS 793
           ++ ++   GC   + +  +        VA+ +A VE++  +  LCL NS
Sbjct: 173 SISNSYTNGCVEALKDTVKLAGTVFGSVAIAIAIVELIGIICALCLANS 221


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = +2

Query: 476 KKRSDANADEAAEAVFSELQRQ 541
           +KR DA  DE+ EA+F  + RQ
Sbjct: 292 EKRDDAK-DESVEAIFQSILRQ 312


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 671 GCGPQIGELYQKWNKPIAGVALGVACVEVVXTLXXLCL 784
           GC  Q+   + +WN   A     ++C+ +V T+   CL
Sbjct: 500 GCY-QLAINHIRWNSAFAIAPAVISCLGIVATMAVACL 536


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +2

Query: 671 GCGPQIGELYQKWNKPIAGVALGVACVEVVXTLXXLCL 784
           GC  Q+   + +WN   A     ++C+ +V T+   CL
Sbjct: 590 GCY-QLAINHIRWNSAFAIAPAVISCLGIVATMAVACL 626


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 440 KESIMDGVGVLFKKRSDANADEAAEAVFSELQR 538
           K S+M   G+  +     + DE    VFS LQR
Sbjct: 96  KRSLMGAQGLSIRGLQINHEDETIRPVFSTLQR 128


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +2

Query: 587 TLPESCCVKKSILSTFAGNNCTVDAANPGCGPQIGEL 697
           T  ESC V   I + + G N  +  A    G +I EL
Sbjct: 252 TFFESCGVADLIATCYGGRNRKICEAFVKTGKKISEL 288


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,141
Number of Sequences: 438
Number of extensions: 3837
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)