Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_O04
(894 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 48 1e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 48 1e-07
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 2e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 4e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 46 5e-07
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 43 4e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 41 2e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 40 2e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 2e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 4e-05
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 38 2e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 35 9e-04
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 33 0.004
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.004
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.004
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.005
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 33 0.005
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 33 0.005
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 32 0.006
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.008
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.10
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 1.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 1.2
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 2.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.8
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 50.8 bits (116), Expect = 2e-08
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIXRLDISTPISMQLDXWPN 512
P +++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P
Sbjct: 104 PPDKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPF 160
Query: 513 DMQTCTFKFGSRMHNSD 563
D QTC KFGS N D
Sbjct: 161 DQQTCIMKFGSWTFNGD 177
Score = 23.0 bits (47), Expect = 3.8
Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
K+ VN L ++ N+ E + L+ W D +L W+ ++G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.0 bits (109), Expect = 1e-07
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
P + +WRPD+VL N A A +A + + G V W + + ++ +P D Q
Sbjct: 106 PSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQ 165
Query: 522 TCTFKFGSRMHNSDXMD 572
TC KFGS ++ +D
Sbjct: 166 TCVLKFGSWTYDGFKVD 182
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVWILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWG 325
W E+G
Sbjct: 92 WEPKEYG 98
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.0 bits (109), Expect = 1e-07
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Frame = +3
Query: 321 GAAALGWCPRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIXRLDISTPIS 488
G + + P E +W PD+VL N A G+Y + +A + G VSW +
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKYTGDVSWKPPAIYKSSCE 159
Query: 489 MQLDXWPNDMQTCTFKFGSRMHNSDXMD 572
+ ++ +P D Q+C KFGS +N +D
Sbjct: 160 INVEYFPFDEQSCIMKFGSWTYNGAQVD 187
Score = 26.2 bits (55), Expect = 0.40
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Frame = +2
Query: 140 MIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESEST--VWILADLQMNWID 292
+ D LL+ Y+R P LT+ L N++ T VW+ + W D
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWV----EQRWND 92
Query: 293 KRLSWNAGEWG 325
+L WN E+G
Sbjct: 93 YKLKWNPEEYG 103
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 2e-07
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
P + +WRPD+VL N A A +A ++ G V W + + ++ +P D Q
Sbjct: 102 PSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQ 161
Query: 522 TCTFKFGSRMHNSDXMD 572
TC KFGS ++ +D
Sbjct: 162 TCVMKFGSWTYDGFQVD 178
Score = 25.0 bits (52), Expect = 0.93
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 9/80 (11%)
Frame = +2
Query: 113 CENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLR-------HANIRESEST--VWIL 265
C + D LL+ Y++ P + LT+ ++ N++ T +W+
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWV- 77
Query: 266 ADLQMNWIDKRLSWNAGEWG 325
+ +W D +L W+ E+G
Sbjct: 78 ---EQSWYDYKLKWDPKEYG 94
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 4e-07
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
P RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D Q
Sbjct: 101 PPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQ 160
Query: 522 TCTFKFGSRMHNSDXMD 572
C KFGS ++ +D
Sbjct: 161 RCEMKFGSWTYDGFQLD 177
Score = 24.2 bits (50), Expect = 1.6
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 WILADLQMNWIDKRLSWNAGEWG 325
L++ W D + WN ++G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 5e-07
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIXRLDISTPISMQLDXWPN 512
P + +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 106 PSDHIWRPDIVLYNNAD---GNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPY 162
Query: 513 DMQTCTFKFGSRMHNSDXMD 572
D+QTC K GS ++ +D
Sbjct: 163 DVQTCVLKLGSWTYDGFKVD 182
Score = 23.0 bits (47), Expect = 3.8
Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP--DSKIVVNLTLHLRHANIRESESTVWILAD---LQMNWIDKRLS 304
+ D LL+ Y++ P ++ V+ + + L+ + + + I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 305 WNAGEWG 325
W E+G
Sbjct: 92 WEPKEYG 98
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +3
Query: 339 WCPRERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIXRLDISTPISMQLDXWPND 515
+ P E +W PD+VL N A G + +A + G V W + + + +P D
Sbjct: 96 YVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFD 155
Query: 516 MQTCTFKFGSRMHNSDXMD 572
QTC KFGS ++ +D
Sbjct: 156 QQTCFMKFGSWTYDGIQID 174
Score = 31.5 bits (68), Expect = 0.011
Identities = 28/91 (30%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Frame = +2
Query: 95 IASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA---NIRESEST 253
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 254 --VWILADLQMNWIDKRLSWNAGEWGCSTWL 340
VW L+ W D + W+ E+G T L
Sbjct: 69 TNVW----LEHEWQDHKFQWDPAEYGGVTEL 95
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 195 MKFGSWTYDGNQVD 208
Score = 28.3 bits (60), Expect = 0.10
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVWILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEWG 325
WN E+G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 43.2 bits (97), Expect = 3e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 135 KLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 194
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 195 MKFGSWTYDGNQVD 208
Score = 28.3 bits (60), Expect = 0.10
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +2
Query: 140 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVWILADLQMNWIDKRLS 304
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 305 WNAGEWG 325
WN E+G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 42.7 bits (96), Expect = 4e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V++NGS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.9 bits (94), Expect = 8e-06
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V+++GS ++ + M + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 41.5 bits (93), Expect = 1e-05
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIXRLDISTPISMQLDXWPN 512
P E +W PD+VL N A G+Y + +A + + G V W + + ++ +P
Sbjct: 98 PSEHIWLPDIVLYNNAD---GNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPF 154
Query: 513 DMQTCTFKFGSRMHNSDXMD 572
D QTC KFGS ++ +D
Sbjct: 155 DEQTCFMKFGSWTYDGYTVD 174
Score = 28.3 bits (60), Expect = 0.10
Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Frame = +2
Query: 86 TCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHLRH---ANIRES 244
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 245 EST--VWILADLQMNWIDKRLSWNAGEWG 325
T VW+ + W D +L WN ++G
Sbjct: 66 IMTTNVWV----EQEWNDYKLKWNPDDYG 90
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 40.7 bits (91), Expect = 2e-05
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTA-GDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCT 530
+LW+PD+++ N+A G Y V+++GS ++ + + + +P D Q C
Sbjct: 67 KLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCD 126
Query: 531 FKFGSRMHNSDXMD 572
KFGS ++ + +D
Sbjct: 127 MKFGSWTYDGNQVD 140
Score = 27.9 bits (59), Expect = 0.13
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +2
Query: 230 NIRESESTVWILADLQMNWIDKRLSWNAGEWG 325
++ E + A L++ W+D L WN E+G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 40.3 bits (90), Expect = 2e-05
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Frame = +3
Query: 345 PRERLWRPDVVLLNAAATTAGDYALRARV--SNNGSVSWIXRLDISTPISMQLDXWPNDM 518
P R+WRPD +L N A + V S+ G V W+ + + ++ +P D
Sbjct: 83 PYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDE 142
Query: 519 QTCTFKFGS 545
Q C K+ S
Sbjct: 143 QRCVLKWAS 151
Score = 23.4 bits (48), Expect = 2.8
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +2
Query: 194 IVVNLTLHLRHANIRESESTVWILADLQMNWIDKRLSWNAGEW 322
+V L+LH ++ E + + W D L WNA E+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEF 74
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
ER+WRPD N + + R+S +G + + RL I M+L +P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 522 TCTFKFGS 545
+C GS
Sbjct: 175 SCPLILGS 182
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 37.5 bits (83), Expect = 2e-04
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 315 GNGAAALGWCPRERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIXRLDISTPI 485
G AL R+W+PD N + T R+ +G V + RL I
Sbjct: 71 GKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGC 130
Query: 486 SMQLDXWPNDMQTCTFKFGS 545
M L+ +P D Q C +FGS
Sbjct: 131 PMNLENFPMDTQRCPLQFGS 150
Score = 32.3 bits (70), Expect = 0.006
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVWILADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAGE 319
+D+RL++ G+
Sbjct: 62 VDRRLAFQGGK 72
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 37.1 bits (82), Expect = 2e-04
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 357 LWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTC 527
+W PD+ + N+ T G V ++GSVS + + + WP D C
Sbjct: 124 IWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRC 183
Query: 528 TFKFGSRMHNSDXMDS*LTK 587
FGS +H+ + ++ L K
Sbjct: 184 RINFGSWVHSGEEVNIFLDK 203
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
E++W PD N + D R R+S +GSV++ R + M L +P D Q
Sbjct: 114 EKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQ 173
Query: 522 TCTFKFGS 545
CT + S
Sbjct: 174 NCTVEIES 181
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 35.1 bits (77), Expect = 9e-04
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVWILADLQ 277
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNAGEW 322
+ W L+W + E+
Sbjct: 88 LMWEQSHLTWKSSEF 102
Score = 27.5 bits (58), Expect = 0.17
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTC 527
+W PD+V+ ++ + D ++ V N+G++ + + WP D+ C
Sbjct: 115 IWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNC 173
Query: 528 TFKFGSRMHNSD 563
T S H S+
Sbjct: 174 TIHIASWSHGSN 185
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 33.1 bits (72), Expect = 0.004
Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIXRLDISTPISMQLDXWPNDMQ 521
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 522 TCTFKFGSRMHNSDXM 569
C + S H +D M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQT 524
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 525 CTFKFGSRMHNSDXM 569
C+ + S +D +
Sbjct: 174 CSLRMASYGWTTDDL 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.004
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIXRLDISTPISMQLDXWPNDMQT 524
R+W PD+ N + + R+ NGSV + R+ ++ M L +P D Q
Sbjct: 114 RVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQV 173
Query: 525 CTFKFGSRMHNSDXM 569
C+ + S +D +
Sbjct: 174 CSLRMASYGWTTDDL 188
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 351 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPN 512
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 513 DMQTCTFKFGS 545
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
Score = 23.0 bits (47), Expect = 3.8
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVWILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 287 IDKRLSW 307
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 351 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPN 512
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 91 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 147
Query: 513 DMQTCTFKFGS 545
D Q C + S
Sbjct: 148 DRQLCHIEIES 158
Score = 21.8 bits (44), Expect = 8.7
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVWILADLQMNW 286
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 287 IDKRLSW 307
D RL++
Sbjct: 68 TDPRLAF 74
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 32.7 bits (71), Expect = 0.005
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 6/71 (8%)
Frame = +3
Query: 351 ERLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIXRLDISTPISMQLDXWPN 512
+ +W PD +N ATT+ ++ R+ ++GS++ RL I+ M L +P
Sbjct: 30 KNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPM 86
Query: 513 DMQTCTFKFGS 545
D Q C + S
Sbjct: 87 DRQLCHIEIES 97
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 32.3 bits (70), Expect = 0.006
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 348 RERLWRPDVVLLN--AAATTAGDYA-LRARVSNNGSVSWIXRLDISTPISMQLDXWPNDM 518
R+ +W P V + N ++A T + + + +G V RL + ++L+ +P D+
Sbjct: 94 RDLIWTPTVYVSNEPSSAITGNNVKDVLVSIDPSGMVRLNTRLQATLNCGLRLEKFPFDV 153
Query: 519 QTCTFKFGSRMHN 557
Q C F S HN
Sbjct: 154 QECPLIFESWTHN 166
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/74 (20%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +3
Query: 357 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIXRLDISTPISMQLDXWPNDMQTC 527
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ + +P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 528 TFKFGSRMHNSDXM 569
+ S H + +
Sbjct: 147 SMMIESLSHTTQDL 160
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 28.3 bits (60), Expect = 0.10
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIXRLDISTPISMQLDXWPND 515
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MQTC 527
+Q C
Sbjct: 127 IQIC 130
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 426 RVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCTFKFGS 545
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 426 RVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCTFKFGS 545
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 426 RVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCTFKFGS 545
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +3
Query: 426 RVSNNGSVSWIXRLDISTPISMQLDXWPNDMQTCTFKFGS 545
R+ NG+V+++ R + +L+ +P D C+F S
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.8 bits (49), Expect = 2.2
Identities = 12/44 (27%), Positives = 21/44 (47%)
Frame = +3
Query: 318 NGAAALGWCPRERLWRPDVVLLNAAATTAGDYALRARVSNNGSV 449
NG A+ C +PD++ + A + GD +V NG++
Sbjct: 17 NGTGAVVECQARGNPQPDIIWVRADGSAVGDVPGLRQVLPNGNL 60
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 795 QGPPXGXXXGAPXPNXGP 742
QGPP G GAP P+ P
Sbjct: 44 QGPPPGGPPGAP-PSQNP 60
Score = 22.2 bits (45), Expect = 6.6
Identities = 10/33 (30%), Positives = 13/33 (39%)
Frame = +2
Query: 695 PKCFPGKGARXPXXGPGPXFGXGAPXXXPXGGP 793
P+ P + + P G P G P P G P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 21.8 bits (44), Expect = 8.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 337 PSAAAPFPCVPTQS 296
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,066
Number of Sequences: 438
Number of extensions: 5484
Number of successful extensions: 93
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 74
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28904421
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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