Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_N13
(873 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 0.69
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 0.69
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.69
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.69
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.69
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 24 1.6
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.8
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.7
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 8.5
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 22 8.5
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 91
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 308 RETSRERSRDRRGRGRSREHRIIPSHYIEQIP 339
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.69
Identities = 14/32 (43%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET R RR HR PSH E+IP
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIP 340
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 24.2 bits (50), Expect = 1.6
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 638 RETKRSAEXCRRX*NAFWPHRR*PSHVAERIP 733
RET + RR HR PSH E+IP
Sbjct: 293 RETSKERSRDRRERGRSREHRIIPSHYIEQIP 324
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = +1
Query: 391 ASMTWCISISWIHRLRRHSCG-RSSCSTIWLRW 486
A MT WIH L RH+ + +W+ W
Sbjct: 359 AIMTQLREEGWIHHLARHAVACFLTRGDLWISW 391
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 552 PAVGRGGTPPSQHPGQ 505
P G G PPSQ+P Q
Sbjct: 47 PPGGPPGAPPSQNPSQ 62
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 8.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +3
Query: 513 GAVMAEFPLDPQLAKMLIASCNHNCSNEIL 602
G + +FP D Q ++ S HN + +L
Sbjct: 143 GLRLEKFPFDVQECPLIFESWTHNVLDMVL 172
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 101 LWTLPPSCRWLRLVDLE 51
LW L P+C + +L++ E
Sbjct: 259 LWKLLPTCAYKQLIESE 275
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 250,673
Number of Sequences: 438
Number of extensions: 5228
Number of successful extensions: 25
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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