Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_N07
         (873 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    50   1e-05
X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    31   7.2  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    31   7.2  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    31   7.2  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    31   7.2  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 49.6 bits (113), Expect = 1e-05
 Identities = 23/30 (76%), Positives = 24/30 (80%)
 Frame = -3

Query: 820 MIGRXDIEGSKSNVAMNAWLPQASIPVVTF 731
           MIGR DIEGSKS+VAMNAW PQAS P   F
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNF 30


>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 198 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 293
           HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 198 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 293
           HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 198 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 293
           HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 30.7 bits (66), Expect = 7.2
 Identities = 14/32 (43%), Positives = 19/32 (59%)
 Frame = +3

Query: 198 HCPYLLSSETTAKGTGLGESAGKEDPVELDSS 293
           HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 249 HCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,185,165
Number of Sequences: 237096
Number of extensions: 2785938
Number of successful extensions: 6248
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6244
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)