Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_M24
(887 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 39 0.008
AY051629-1|AAK93053.1| 519|Drosophila melanogaster GH27888p pro... 31 1.6
AE014134-2977|AAF53709.1| 519|Drosophila melanogaster CG17323-P... 31 1.6
DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1 ... 30 3.7
BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p pro... 30 3.7
AY051873-1|AAK93297.1| 601|Drosophila melanogaster LD36719p pro... 30 3.7
AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB... 30 3.7
AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC... 30 3.7
AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA... 30 3.7
AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute pr... 30 3.7
AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein... 30 4.9
AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA... 30 4.9
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 39.1 bits (87), Expect = 0.008
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = +2
Query: 374 ADLLVKLFASNSTVDDGGATPPSIPRCDSSLPDICFTQCAVRRELRLLDVHKSSGPDGIP 553
A+++ +LF S T+ PP+ S P C T C V + + +K+ G DGIP
Sbjct: 374 ANIVSELFPSQHTLWQPAVDPPA-----SDFP--CITSCEVVEAAKRIRPNKAPGIDGIP 426
Query: 554 AVVLKTCAPELTPALTRLYRLSYCTNKVPSSWK 652
V++K A ++ P WK
Sbjct: 427 GVIVKAAATARPEVFRDTFQQCLLDGVFPKRWK 459
>AY051629-1|AAK93053.1| 519|Drosophila melanogaster GH27888p
protein.
Length = 519
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -2
Query: 505 LPPDCTLCEADIRQ-----GAITPGDARWCGTPVVHSRVRGEEFDQKVSLLFRAVGQIV 344
LP LC +++ G + +A +CG PVV + + G++F +L+ R +G I+
Sbjct: 350 LPQRDILCHPNVKVFMSHGGLMGTSEAAYCGVPVVATPMYGDQFVNTAALVERGMGTIL 408
>AE014134-2977|AAF53709.1| 519|Drosophila melanogaster CG17323-PA
protein.
Length = 519
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Frame = -2
Query: 505 LPPDCTLCEADIRQ-----GAITPGDARWCGTPVVHSRVRGEEFDQKVSLLFRAVGQIV 344
LP LC +++ G + +A +CG PVV + + G++F +L+ R +G I+
Sbjct: 350 LPQRDILCHPNVKVFMSHGGLMGTSEAAYCGVPVVATPMYGDQFVNTAALVERGMGTIL 408
>DQ398924-1|ABD61624.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398923-1|ABD61623.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398922-1|ABD61622.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398921-1|ABD61621.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398920-1|ABD61620.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398919-1|ABD61619.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398918-1|ABD61618.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>DQ398917-1|ABD61617.1| 851|Drosophila melanogaster argonaute-1
protein.
Length = 851
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 364 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 400
>BT023945-1|ABB36449.1| 984|Drosophila melanogaster LP02696p
protein.
Length = 984
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 451 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 487
>AY051873-1|AAK93297.1| 601|Drosophila melanogaster LD36719p
protein.
Length = 601
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 68 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 104
>AE013599-1796|AAF58315.1| 950|Drosophila melanogaster CG6671-PB,
isoform B protein.
Length = 950
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 417 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 453
>AE013599-1795|AAF58313.1| 984|Drosophila melanogaster CG6671-PC,
isoform C protein.
Length = 984
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 451 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 487
>AE013599-1794|AAF58314.1| 984|Drosophila melanogaster CG6671-PA,
isoform A protein.
Length = 984
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 451 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 487
>AB035447-1|BAA88078.1| 950|Drosophila melanogaster argonaute
protein protein.
Length = 950
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 262 EPCFLVARQSCRRKLLQV*SPTTAQVR*QSGPQRERE 372
E C +VA Q C +KL + + T + +S P RERE
Sbjct: 417 EVCNIVAGQRCIKKLTDMQTSTMIKATARSAPDRERE 453
>AJ556820-1|CAD89219.3| 1641|Drosophila melanogaster Tho2 protein
protein.
Length = 1641
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 83 HLKRSAYVAWDNARRRRDPNISGERRKYNAASRSYKKVIAKAKSEHVARVGERLKSY 253
H + S Y W N + PN+ R+ A R K ++ + E+V ++G + Y
Sbjct: 579 HFRYSLYARWKNDSYQLHPNLI---RRCGLAQRDIKALMKRVSKENVKQLGRLVGKY 632
>AE014134-342|AAF51302.2| 1641|Drosophila melanogaster CG31671-PA
protein.
Length = 1641
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 83 HLKRSAYVAWDNARRRRDPNISGERRKYNAASRSYKKVIAKAKSEHVARVGERLKSY 253
H + S Y W N + PN+ R+ A R K ++ + E+V ++G + Y
Sbjct: 579 HFRYSLYARWKNDSYQLHPNLI---RRCGLAQRDIKALMKRVSKENVKQLGRLVGKY 632
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 41,400,673
Number of Sequences: 53049
Number of extensions: 993644
Number of successful extensions: 2874
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2872
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -