Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_M12
(880 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 60 3e-11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 58 8e-11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 58 8e-11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 58 1e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 58 1e-10
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 57 2e-10
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 56 4e-10
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 56 6e-10
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 56 6e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 8e-10
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 52 5e-09
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 52 5e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 50 2e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 49 5e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 2e-04
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 34 0.002
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.014
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.23
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.92
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 59.7 bits (138), Expect = 3e-11
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWR 346
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 347 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 514
PD+VL N A G+Y +R + + NG V W+ + ++ + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 515 KFGSXMXNIDXMDFVI 562
KFGS N D + +
Sbjct: 168 KFGSWTFNGDQVSLAL 183
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V++NGS ++ + + + +P D C KFGS + + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 58.4 bits (135), Expect = 8e-11
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V++NGS ++ + + + +P D C KFGS + + +D V+
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 58.0 bits (134), Expect = 1e-10
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V++NGS ++ + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 57.6 bits (133), Expect = 1e-10
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFG 523
PD+VL N A A +A + + G V W + + ++ +P D TC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 524 S 526
S
Sbjct: 173 S 173
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 57.6 bits (133), Expect = 1e-10
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +2
Query: 167 NSKIVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSE 334
N +VV L L L N+++ T + L+ W D + W+ E+G T L V SE
Sbjct: 43 NDTVVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSE 100
Query: 335 RLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCT 511
+W PD+VL N A G + +A + G V W + + + +P D TC
Sbjct: 101 HIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCF 160
Query: 512 FKFGS 526
KFGS
Sbjct: 161 MKFGS 165
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 57.2 bits (132), Expect = 2e-10
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V+++GS ++ + M + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 57.2 bits (132), Expect = 2e-10
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 LQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 427
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 428 VSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
V W + + ++ +P D TC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 56.8 bits (131), Expect = 2e-10
Identities = 32/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V+++GS ++ + M + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 56.0 bits (129), Expect = 4e-10
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V+++GS ++ + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V+++GS ++ + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 55.6 bits (128), Expect = 6e-10
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 2/119 (1%)
Frame = +2
Query: 212 NIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-ATTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXNIDXMDFVI 562
G Y V+++GS ++ + + + +P D C KFGS + + +D V+
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 55.6 bits (128), Expect = 6e-10
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = +2
Query: 254 LQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 418
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 419 NGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGSXMXN 538
G VSW + + ++ +P D +C KFGS N
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYN 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 8e-10
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 514
PD+VL N A G+Y + +A V +G V W + S+ ++ +P D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 515 KFGS 526
K GS
Sbjct: 170 KLGS 173
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 52.4 bits (120), Expect = 5e-09
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +2
Query: 143 RTIGSLPPNSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWG-CXT 316
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 317 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDN 484
V SE +W PD+VL N A G+Y + +A + + G V W + + ++
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 485 WPNDMXTCTFKFGS 526
+P D TC KFGS
Sbjct: 152 FPFDEQTCFMKFGS 165
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 52.4 bits (120), Expect = 5e-09
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 LQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVVLLNAAATTA-GDYALRARVSNNGS 427
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 428 VSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
++ + + + +P D C KFGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 50.4 bits (115), Expect = 2e-08
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 176 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEW-GCXTWLVSSERLWRPD 352
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
+L N A + VS+ G V W+ + + ++ +P D C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.2 bits (112), Expect = 5e-08
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWLVSSERLWRPDVVLLNAAAT---TA 385
I E + T + + +W+D+RL + G+ + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
R+ +G V + RL I M L+N+P D C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 47.6 bits (108), Expect = 2e-07
Identities = 30/137 (21%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Frame = +2
Query: 173 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLW 343
+I N+T+ L + + S + + + + + W D L W ++ ++ V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 344 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTF 514
PD+ + N+ T G V ++GSVS + + + +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 515 KFGSXMXNIDXMDFVID 565
FGS + + + ++ +D
Sbjct: 186 NFGSWVHSGEEVNIFLD 202
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.2 bits (97), Expect = 3e-06
Identities = 29/120 (24%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = +2
Query: 182 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWL-VSSERLWRPDVV 358
++ L ++H N+ E TV L++ W L W + E+ + V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 359 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDN--WPNDMXTCTFKFGS 526
+ + + ++ V N+G++ + TP+ + D+ WP D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPV-CEYDHTWWPYDILNCTIHIAS 179
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 7e-06
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2
Query: 257 QMNWIDKRLXWNAGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGS 427
+ +W D RL + + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 428 VSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
+ + RL I M+L N+P D +C GS
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 37.1 bits (82), Expect = 2e-04
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRILADLQMNWIDKRLXWNAGEWGCXTWLVSSERLWRPDVVLLNAAATTAGDY 394
I E I L W D+RL ++ E +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 395 ALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFGS 526
R R+S +GSV++ R + M L +P D CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPNSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 298
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 299 EWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 472
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 473 QLDNWPNDMXTCTFKFGS 526
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPNSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 298
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 299 EWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 472
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 473 QLDNWPNDMXTCTFKFGS 526
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 34.3 bits (75), Expect = 0.002
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 4/138 (2%)
Frame = +2
Query: 125 STRSSQRTIGSLPPNSKIVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAG 298
STR +R + P + VN++ L L A+ ES + LQ W D RL + N
Sbjct: 71 STRYDKRLLP--PVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRS 128
Query: 299 EWGCXTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISM 472
++ + + +W PD ++ R+ NG+V+++ R +
Sbjct: 129 QYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
Query: 473 QLDNWPNDMXTCTFKFGS 526
+L+ +P D C+F S
Sbjct: 189 RLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 31.1 bits (67), Expect = 0.014
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRILADLQMNWIDKRLXW-NAGEWGCXTWLVSSERLWRP 349
+ VN++ L L A+ ES + LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 350 DV--VLLNAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMXTCTFKFG 523
D ++ R+ NG+V+++ R + +L+ +P D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 524 S 526
S
Sbjct: 257 S 257
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.23
Identities = 17/81 (20%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMX 502
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCTFKFGSXMXNIDXMDFVID 565
C + S D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.0 bits (52), Expect = 0.92
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 496
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 497 MXTC 508
+ C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,178
Number of Sequences: 438
Number of extensions: 4177
Number of successful extensions: 66
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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