Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_M09
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   2.0  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   2.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   6.1  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.1  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 661 QPQHPQRWSRGSTPRSLNTSRANNHHIKP 575
           Q    Q WSRG+T  SL+ S  +   + P
Sbjct: 16  QGTQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 661 QPQHPQRWSRGSTPRSLNTSRANNHHIKP 575
           Q    Q WSRG+T  SL+ S  +   + P
Sbjct: 16  QGTQAQHWSRGNTWLSLDNSNMSMSSVGP 44


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 6.1
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 272 VLDGHDSTSSQNKFF 228
           + +GHD+T+S + FF
Sbjct: 346 MFEGHDTTASGSSFF 360


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
 Frame = +3

Query: 9   FASQWHYTRLVVTQISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNF-QMETYVYKR 185
           FAS   YT   +   S T+  G+  +AL+   +T+ L  +  L + N+N+   E +V  +
Sbjct: 229 FASDPRYTTFTINGESFTLQSGIFGMALS--PLTQNLYYSA-LSSHNLNYVNTEQFVKSQ 285

Query: 186 -RADGTH 203
            +A+  H
Sbjct: 286 YQANNVH 292


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 6/30 (20%), Positives = 16/30 (53%)
 Frame = +3

Query: 432 VLDPAQDHQPITEASYVNIPVIALCNTDSP 521
           ++DP ++++   E   + IP++   +   P
Sbjct: 167 IVDPVEENETYDEFDTIRIPIVRSLSKSPP 196


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -2

Query: 668 TKSTTTSPALVTGKHTTKPQHFTCQQPPHQTNRV 567
           T +TTT+    T  +TT  Q+ +   PP Q + V
Sbjct: 665 TTTTTTTTTTTTTPNTT--QNASATTPPPQVDEV 696


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,947
Number of Sequences: 438
Number of extensions: 5944
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)