Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_M04
         (817 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p pro...    31   2.5  
AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA...    31   2.5  
AE014297-2547|AAF55570.1| 1194|Drosophila melanogaster CG14304-P...    29   5.8  
U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensit...    29   7.6  
AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p pro...    29   7.6  
AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   7.6  
AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA...    29   7.6  

>AY058593-1|AAL13822.1|  767|Drosophila melanogaster LD28817p
           protein.
          Length = 767

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 202 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTFRAXGQEITLRQH-PR 26
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF      +++ +  P 
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTFNVDQANLSMHETLPE 595

Query: 25  GPS 17
            PS
Sbjct: 596 EPS 598


>AE014297-1398|AAF54712.1|  767|Drosophila melanogaster CG6962-PA
           protein.
          Length = 767

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
 Frame = -1

Query: 202 RDSGNLVNPFMRVTN*MTRHLATLRES*LLPPFTRACLNFFTLTFRAXGQEITLRQH-PR 26
           R  G L N + ++    T+   TLRE   +P   R C++ F  TF      +++ +  P 
Sbjct: 536 RSEGFLKNFYKKIFGECTQEEVTLREFSRIPEVLRQCIDAFCRTFNVDQANLSMHETLPE 595

Query: 25  GPS 17
            PS
Sbjct: 596 EPS 598


>AE014297-2547|AAF55570.1| 1194|Drosophila melanogaster CG14304-PA
           protein.
          Length = 1194

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
 Frame = -2

Query: 504 PTYATPLMSPYNARLESSSTGSSFPADSPKP--VPLAVVSLDSR*GHSHHLPWSHQPCG 334
           P    P+   Y  +  SS+ G+   A  P P  +P+ V  +  +  H HH    H P G
Sbjct: 65  PAPELPINQQYATKHSSSAGGAQLQAPLPGPGRIPVPVAYMPQQKHHPHHHGPPHPPPG 123


>U04809-1|AAA19430.1|  622|Drosophila melanogaster cocaine-sensitive
           serotonin transporterprotein.
          Length = 622

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 613 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 509
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY071023-1|AAL48645.1|  622|Drosophila melanogaster RE10485p
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 613 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 509
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -1

Query: 520 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 398
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


>AE013599-3863|AAF47200.1|  622|Drosophila melanogaster CG4545-PA
           protein.
          Length = 622

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 613 HRAPADIIDRAPLPPNRVSNETMKVVVFQRRSRET 509
           H  PA + D  PL P   +NE + VV    R+RET
Sbjct: 44  HTTPAKVTD--PLAPKLANNERILVVSVTERTRET 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,058,256
Number of Sequences: 53049
Number of extensions: 733500
Number of successful extensions: 1889
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1889
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3839531124
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)