Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_L03
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak k... 31 1.3
U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak k... 31 1.3
U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly glu... 30 1.8
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 1.8
Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical... 29 3.1
AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein. 29 3.1
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.2
L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeo... 28 7.2
AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene... 28 7.2
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 28 9.5
>U00046-6|AAN65305.1| 422|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform b protein.
Length = 422
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 306 GHLNNGFHHTTSSPQLRGFWHRKQ 329
>U00046-5|AAC47047.4| 516|Caenorhabditis elegans Mammalian zak
kinase homolog protein1, isoform a protein.
Length = 516
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +3
Query: 222 GTVSSTFDHPFSTPVLRSYWHRNQ 293
G +++ F H S+P LR +WHR Q
Sbjct: 400 GHLNNGFHHTTSSPQLRGFWHRKQ 423
>U39850-6|AAM45366.1| 1081|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform a
protein.
Length = 1081
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +1
Query: 559 HQPDH-QIPDSIHQPPQT*HPFPSIP----*TPY*KGVRAGVKASGCHQRLHQRISPPRH 723
HQP QIP S +QP Q H P +P P+ VR A+ Q QRI P+H
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPVRGSHPAAQQVQNAPQRI--PQH 207
Query: 724 WAWLTGVRP 750
GV P
Sbjct: 208 VPMPQGVAP 216
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 30.3 bits (65), Expect = 1.8
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +1
Query: 559 HQPDH-QIPDSIHQPPQT*HPFPSIP----*TPY*KGVRAGVKASGCHQRLHQRISPPRH 723
HQP QIP S +QP Q H P +P P+ VR A+ Q QRI P+H
Sbjct: 150 HQPTAGQIPQSSNQPAQQTHNVPRMPQPLQQVPHPSPVRGSHPAAQQVQNAPQRI--PQH 207
Query: 724 WAWLTGVRP 750
GV P
Sbjct: 208 VPMPQGVAP 216
>Z75712-6|CAB00048.1| 1188|Caenorhabditis elegans Hypothetical protein
K04G2.8b protein.
Length = 1188
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 807 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 866
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 867 YLEPEPERRSHS 878
>Z75712-5|CAB00045.1| 1186|Caenorhabditis elegans Hypothetical protein
K04G2.8a protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>AL132862-11|CAB60541.1| 396|Caenorhabditis elegans Hypothetical
protein Y73F8A.16 protein.
Length = 396
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 253 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRD 357
F L F++TG E KS V + S+ +I GYR+
Sbjct: 37 FPELNFNITGLEEKSRYVVLLSIEKYDNIRYGYRN 71
>AF013950-1|AAC47747.1| 1186|Caenorhabditis elegans APR-1 protein.
Length = 1186
Score = 29.5 bits (63), Expect = 3.1
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 225 TVSSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHH---KRLP--RRVSCQS*GCRF 389
T S + HP ++P+ +S HR Q + A +RLL +P R +S + G +
Sbjct: 805 TSSPAWSHPDTSPIPKSSSHRTQPNRRQDASDADRLLMESIMSEMPKSRIISPRLAGTQQ 864
Query: 390 SFRP*PQNTSHS 425
P P+ SHS
Sbjct: 865 YLEPEPERRSHS 876
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 551 LGYINPI-IKSPIP--YTNHPRLNIHFHQSPERRTKKEFAPGLKPPVVIRGSISVSHP 715
+G ++P I SP+P HP++N ++Q+P R+ K F P P + G+ S S P
Sbjct: 501 VGSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSF-PSSAP--IGSGASSYSTP 555
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +2
Query: 551 LGYINPI-IKSPIP--YTNHPRLNIHFHQSPERRTKKEFAPGLKPPVVIRGSISVSHP 715
+G ++P I SP+P HP++N ++Q+P R+ K F P P + G+ S S P
Sbjct: 327 VGSLDPSQISSPLPPPIQQHPQMNQSWNQTPVRQYKPSF-PSSAP--IGSGASSYSTP 381
>L14730-2|AAB37562.2| 187|Caenorhabditis elegans C.elegans homeobox
protein 16 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 SRPYASSHPPLAISATSTRSSNPRFHTPT-TPDLTS 617
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>AY647457-1|AAT67384.1| 187|Caenorhabditis elegans homeobox gene 16
protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 513 SRPYASSHPPLAISATSTRSSNPRFHTPT-TPDLTS 617
S PY P ++ ATS S +P F +P TP++ S
Sbjct: 12 SSPYPCPSPTISTPATSPSSISPTFASPNGTPNIAS 47
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 557 YINPIIKSPIPYTNHPRLNIHFHQSPERRTKKE 655
+IN KS P H R+ H QSP+++ KKE
Sbjct: 345 HINQCRKSAEPMKRH-RVEAHEKQSPKKKVKKE 376
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 557 YINPIIKSPIPYTNHPRLNIHFHQSPERRTKKE 655
+IN KS P H R+ H QSP+++ KKE
Sbjct: 316 HINQCRKSAEPMKRH-RVEAHEKQSPKKKVKKE 347
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 557 YINPIIKSPIPYTNHPRLNIHFHQSPERRTKKE 655
+IN KS P H R+ H QSP+++ KKE
Sbjct: 345 HINQCRKSAEPMKRH-RVEAHEKQSPKKKVKKE 376
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,581,401
Number of Sequences: 27780
Number of extensions: 395318
Number of successful extensions: 1236
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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