Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_K16
         (830 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    24   1.5  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    24   2.0  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 16/67 (23%), Positives = 27/67 (40%)
 Frame = +3

Query: 384 VFPSAPSLKIPVTVDLCWTTADVTVEGVNVLATPSSSRITIGGLALMHQGHPPLRSRLHQ 563
           ++P  P +   +  DL   + D T+        P+   + IG   L  Q H      +  
Sbjct: 410 MYPPVPLIAREIKTDLKLASGDYTI--------PAGCTVVIGTFKLHRQPHIYPNPDVFD 461

Query: 564 PDHQIPE 584
           PD+ +PE
Sbjct: 462 PDNFLPE 468


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 603 GWLVYGIRGFDDRVDVAEIAGEGGLDA*GRDRQ**CERMKG 481
           GW ++G +GF  ++   +IAG G +   G      C  M G
Sbjct: 164 GW-IWGDQGFLKKLGAVDIAGSGAVHLVGGSSALACAIMLG 203


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,364
Number of Sequences: 438
Number of extensions: 3900
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)