Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_K02
(857 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 5.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 5.6
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 5.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 5.6
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.6
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 5.6
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 5.6
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/36 (38%), Positives = 22/36 (61%)
Frame = -1
Query: 179 TLPQDMVPILLNRPAVASMPLPQSHIRQPLIKDPSR 72
T P+D+V + + R + ++P PQ HIR +I D R
Sbjct: 118 TKPEDLVALRIARVNLTTIPFPQWHIR--MINDVKR 151
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical protein
ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1273 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1331
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1332 QMVYRSE 1338
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1146 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1204
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1205 QMVYRSE 1211
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1045 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1103
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1104 QMVYRSE 1110
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1127 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1185
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1186 QMVYRSE 1192
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical protein
ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1273 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1331
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1332 QMVYRSE 1338
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1146 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1204
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1205 QMVYRSE 1211
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1045 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1103
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1104 QMVYRSE 1110
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1127 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1185
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1186 QMVYRSE 1192
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/67 (25%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +3
Query: 63 LSLSTGIFNKRLADMRLREGHACDCGAVEED--RDHVLWECPLYDEIRGRMLDGISRSEV 236
L+ + + + ++ R+ EGH D A+E++ + +V WE + +I R+L S ++
Sbjct: 1158 LNRNVALLRQHVSRTRINEGHHPDVDAIEDEVQKLNVRWE-NVNSQIASRLLAVESALQI 1216
Query: 237 GPVYHAD 257
VY ++
Sbjct: 1217 QMVYRSE 1223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,488,526
Number of Sequences: 27780
Number of extensions: 273464
Number of successful extensions: 786
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 786
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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