Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_J09
(885 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 55 1e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 55 1e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 53 3e-09
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 52 5e-09
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 52 5e-09
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 52 7e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 52 9e-09
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 51 2e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 50 4e-08
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 49 7e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 49 7e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 49 7e-08
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 49 7e-08
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 48 9e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 1e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 1e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 38 9e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 38 9e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 37 2e-04
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 37 2e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 30 0.025
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 30 0.033
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 30 0.033
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 30 0.033
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 29 0.075
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 27 0.30
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.8 bits (126), Expect = 1e-09
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Frame = +3
Query: 84 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVXLTLHLRHANIRESESTVRIQADLQ 257
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 258 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTXGDYALRARVSNNGSVS 431
+ W+D L WN E+ G ++ +LW+PD+++ N A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 432 XIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
+ + + + +P D Q C FGS
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 54.8 bits (126), Expect = 1e-09
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 4/151 (2%)
Frame = +3
Query: 84 CGRMRKR--NITVPHDRLAPRNVRSGLPPDSKIVVXLTLHLRHANIRESESTVRIQADLQ 257
CGR KR N + R V + P ++ +TL + ++ E + A L+
Sbjct: 51 CGRHEKRLLNELLSSYNTLERPVANESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLK 108
Query: 258 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTXGDYALRARVSNNGSVS 431
+ W+D L WN E+ G ++ +LW+PD+++ N A G Y V++NGS
Sbjct: 109 LEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCL 168
Query: 432 XIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
+ + + + +P D Q C FGS
Sbjct: 169 YVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 199
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 53.2 bits (122), Expect = 3e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V++NGS + + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 52.4 bits (120), Expect = 5e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V+++GS + + M + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGS 131
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 52.4 bits (120), Expect = 5e-09
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAVATTXG 386
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFN---NADG 121
Query: 387 DYALRAR----VSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGSXMHXTDXMXX 554
+Y +R + + NG V + + ++ + +P D QTC FGS D +
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSL 181
Query: 555 A 557
A
Sbjct: 182 A 182
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V+++GS + + M + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGS 131
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 51.6 bits (118), Expect = 9e-09
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAVATTXGDYALRARVSNNGS 425
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 426 VSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
V + + ++ +P D QTC FGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 51.2 bits (117), Expect = 1e-08
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V+++GS + + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGS 131
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 51.2 bits (117), Expect = 1e-08
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +3
Query: 228 STVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAVATTXGDYAL-- 398
S + + + + + W D LSW ++ G + V S+ +W PD+ + N+ T +
Sbjct: 87 SVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPP 146
Query: 399 -RARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGSXMH 533
V ++GSVS + + + +WP D C FGS +H
Sbjct: 147 TTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVH 192
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 51.2 bits (117), Expect = 1e-08
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAVATTXGDYALRARVSNNGS 425
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 426 VSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
V + + ++ +P D QTC FGS
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGS 173
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V+++GS + + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGS 131
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 50.8 bits (116), Expect = 2e-08
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN-AVATTX 383
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G Y V+++GS + + + + +P D Q C FGS
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGS 131
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 49.6 bits (113), Expect = 4e-08
Identities = 29/107 (27%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +3
Query: 213 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN---AVATTX 383
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 384 GDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
R+ +G V RL M L+N+P D Q C FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 48.8 bits (111), Expect = 7e-08
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Frame = +3
Query: 102 RNITVPHDRLAPRNVRSGLPPDSK---IVVXLTLHLRHAN-IRESESTVRIQADLQMNWI 269
RNIT+ + L + LP K VV + +R + E + + + +W
Sbjct: 35 RNITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWR 94
Query: 270 DKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAVATTXGDYALR---ARVSNNGSVSXIX 440
D RLS+ S + ER+WRPD N + + R+S +G +
Sbjct: 95 DSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSM 154
Query: 441 RLDXSTPISMXLDNWPNDMQTCTFXFGS 524
RL M L N+P D Q+C GS
Sbjct: 155 RLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 48.8 bits (111), Expect = 7e-08
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAVATTXGDYAL----RARVSN 416
++ +W D +L W E+G L V S+ +WRPD+VL N G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYN---NADGNYEVTLMTKATVYY 137
Query: 417 NGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
+G V + S+ ++ +P D+QTC GS
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGS 173
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.8 bits (111), Expect = 7e-08
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 2/93 (2%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN-AVATTXGDYALRARVSNNGS 425
L++ W D + WN ++G L + RLW+PDV++ N A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 426 VSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
+ + + + +P D Q C FGS
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGS 168
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 48.8 bits (111), Expect = 7e-08
Identities = 30/96 (31%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAVATTXGDYAL----RARVSN 416
++ W D +L WN E+G L V SE +W PD+VL N G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYN---NADGNYEVTLMTKATLKY 142
Query: 417 NGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G VS + + ++ +P D Q+C FGS
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGS 178
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 48.4 bits (110), Expect = 9e-08
Identities = 36/122 (29%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Frame = +3
Query: 174 IVVXLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 341
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 342 RPDVVLLNAVATTXGDYAL-RARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXF 518
PD+VL N G + +A + G V + + + +P D QTC F
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 519 GS 524
GS
Sbjct: 164 GS 165
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +3
Query: 192 LHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--L 362
L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V+ +
Sbjct: 66 LSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSV 125
Query: 363 NAVATTXGDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGSXMHXTD 542
+V ++ V N+G++ + + WP D+ CT S H ++
Sbjct: 126 TSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIASWSHGSN 185
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.4 bits (105), Expect = 4e-07
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Frame = +3
Query: 252 LQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAVATTXGDYAL----RARVSN 416
++ W D +L WN ++G T V SE +W PD+VL N G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN---NADGNYEVTIMTKAILHH 129
Query: 417 NGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
G V + + ++ +P D QTC FGS
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.4 bits (100), Expect = 1e-06
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 6/134 (4%)
Frame = +3
Query: 165 DSKIVVXLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 335
D +V + L +R A I + + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 336 LWRPDVVLLNAVATTXGDYALR---ARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTC 506
+W PD+ N + + R+ NGSV R+ + M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 507 TFXFGSXMHXTDXM 548
+ S TD +
Sbjct: 175 SLRMASYGWTTDDL 188
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 3/120 (2%)
Frame = +3
Query: 174 IVVXLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 350
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 351 VVLLNAVATTXGDYALRAR--VSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
+L N + VS+ G V + + + ++ +P D Q C + S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.5 bits (93), Expect = 1e-05
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 6/134 (4%)
Frame = +3
Query: 165 DSKIVVXLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCSTWLVSSER 335
D VV + + +R + I + +Q + W+D+RL +N G T L + R
Sbjct: 56 DGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASR 114
Query: 336 LWRPDVVLLNAVATTXGDYALR---ARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTC 506
+W PD+ N + + R+ NGSV R+ + M L +P D Q C
Sbjct: 115 VWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVC 174
Query: 507 TFXFGSXMHXTDXM 548
+ S TD +
Sbjct: 175 SLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.3 bits (85), Expect = 9e-05
Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 3/102 (2%)
Frame = +3
Query: 213 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAVATTXGDY 392
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 393 ALR---ARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCT 509
R R+S +GSV+ R + M L +P D Q CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.3 bits (85), Expect = 9e-05
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Frame = +3
Query: 105 NITVPHDRLAPRNVRSGLPPDSKIVVXLTLH-LRHANIRESESTVRIQADLQMNWIDKRL 281
+ +V +D+ N G PP + V +T++ L +++ E + + + W D RL
Sbjct: 18 SFSVSYDKRVRPNY--GGPP---VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRL 72
Query: 282 SWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------VATTXGDYALRARVSNNGSVSX 434
++ G T V SE +W PD +N +ATT ++ R+ ++GS++
Sbjct: 73 AFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITR 128
Query: 435 IXRLDXSTPISMXLDNWPNDMQTC 506
RL + M L +P D Q C
Sbjct: 129 SIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.1 bits (82), Expect = 2e-04
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------VATTXGDYALRARVSN 416
W D RL++ G T V SE +W PD +N +ATT ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 417 NGSVSXIXRLDXSTPISMXLDNWPNDMQTC 506
+GS++ RL + M L +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 37.1 bits (82), Expect = 2e-04
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +3
Query: 264 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------VATTXGDYALRARVSN 416
W D RL++ G T V SE +W PD +N +ATT ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 417 NGSVSXIXRLDXSTPISMXLDNWPNDMQTC 506
+GS++ RL + M L +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.9 bits (69), Expect = 0.008
Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
Frame = +3
Query: 210 NIRESESTVRIQADLQMNWIDKRLSW--NAGEWGCSTWLVSSERLWRPDVVLLNAVATTX 383
+I E T L +W D RL N E + +WRPD NA T
Sbjct: 43 SINEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDWLHNIWRPDCFFKNAKKVTF 102
Query: 384 GDYALRAR---VSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGSXMHXTDXM 548
+ ++ + ++ ++ + +L +M +++P+D Q C+ S H T +
Sbjct: 103 HEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 30.3 bits (65), Expect = 0.025
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +3
Query: 330 ERLWRPDVVLLNAVATTXGDYALRAR---VSNNGSVSXIXRLDXSTPISMXLDNWPNDMQ 500
+ +WRPD NA + T + + + ++ + +L +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 501 TCTFXFGSXMHXTDXM 548
C S H TD M
Sbjct: 176 ECKLQMESLSHTTDEM 191
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 29.9 bits (64), Expect = 0.033
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 129 LAPRNVRSGLPP-DSKIVVXLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 299
L+ R + LPP + V ++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 300 WGCSTWLVSSERLWRPDV--VLLNAVATTXGDYALRARVSNNGSVSXIXRLDXSTPISMX 473
+ + + +W PD ++ R+ NG+V+ + R
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 474 LDNWPNDMQTCTFXFGS 524
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 29.9 bits (64), Expect = 0.033
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 129 LAPRNVRSGLPP-DSKIVVXLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 299
L+ R + LPP + V ++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 300 WGCSTWLVSSERLWRPDV--VLLNAVATTXGDYALRARVSNNGSVSXIXRLDXSTPISMX 473
+ + + +W PD ++ R+ NG+V+ + R
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 474 LDNWPNDMQTCTFXFGS 524
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 29.9 bits (64), Expect = 0.033
Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 5/137 (3%)
Frame = +3
Query: 129 LAPRNVRSGLPP-DSKIVVXLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGE 299
L+ R + LPP + V ++ L L A+ ES ++ LQ W D RL + N +
Sbjct: 70 LSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQ 129
Query: 300 WGCSTWLVSSERLWRPDV--VLLNAVATTXGDYALRARVSNNGSVSXIXRLDXSTPISMX 473
+ + + +W PD ++ R+ NG+V+ + R
Sbjct: 130 YEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGR 189
Query: 474 LDNWPNDMQTCTFXFGS 524
L+ +P D C+F S
Sbjct: 190 LNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 28.7 bits (61), Expect = 0.075
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 3/114 (2%)
Frame = +3
Query: 192 LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLL 362
L L A+ ES ++ LQ W D RL + N ++ + + +W PD ++
Sbjct: 144 LLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMH 203
Query: 363 NAVATTXGDYALRARVSNNGSVSXIXRLDXSTPISMXLDNWPNDMQTCTFXFGS 524
R+ NG+V+ + R L+ +P D C+F S
Sbjct: 204 GDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.6 bits (56), Expect = 0.30
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 11/131 (8%)
Frame = +3
Query: 147 RSGLPPDSKIVVXLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGC 308
+ GLP ++V + + N I + R+ ++ +WI+ RL + G+
Sbjct: 6 KQGLP----VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYV 61
Query: 309 STWLVSSERLWRPDVVLLNAVATTXGDYALRARVSN-----NGSVSXIXRLDXSTPISMX 473
+ + LW+PD LNA + AL + S+ N +V R+ M
Sbjct: 62 TLPPEFFDSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQME 119
Query: 474 LDNWPNDMQTC 506
+P D+Q C
Sbjct: 120 FQLYPMDIQIC 130
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -2
Query: 317 PSAAAPLPCVPTQS 276
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Score = 21.8 bits (44), Expect = 8.6
Identities = 9/33 (27%), Positives = 11/33 (33%)
Frame = -1
Query: 690 PXGTXPXXXXPPXXRSGAVPPXXTEPAXIPTXP 592
P P P +PP P +PT P
Sbjct: 411 PSAGAPMPPIPNMSNMSGMPPLPNMPGSMPTMP 443
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,126
Number of Sequences: 438
Number of extensions: 4383
Number of successful extensions: 82
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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