Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_J05
         (833 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    63   1e-09
AJ291714-2|CAC32842.1|  384|Homo sapiens ring finger protein 30 ...    31   3.9  
AC013413-4|AAY24296.1|  384|Homo sapiens unknown protein.              31   3.9  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 62.9 bits (146), Expect = 1e-09
 Identities = 31/37 (83%), Positives = 32/37 (86%), Gaps = 2/37 (5%)
 Frame = -1

Query: 569 MIGRADIEGSKSNVAMNAWLPQAS--CGNFSGTSC*K 465
           MIGRADIEGSKS+VAMNAW PQAS  CGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>AJ291714-2|CAC32842.1|  384|Homo sapiens ring finger protein 30
           protein.
          Length = 384

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 397 LIQMFSTHRDCESTAYRSFXIKSF*QEVPEKLPQLACGSQAFIATLLFDPSMSALPIIAX 576
           L ++F  H+DCE     +   +   Q++   LP+L C         L  PS S  PI+A 
Sbjct: 132 LCKVFGAHKDCEVAPLPTIYKRQKKQDLT-LLPRLECSGTNTTYCSLDLPSSSDPPILAS 190

Query: 577 QNS 585
           QN+
Sbjct: 191 QNT 193


>AC013413-4|AAY24296.1|  384|Homo sapiens unknown protein.
          Length = 384

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = +1

Query: 397 LIQMFSTHRDCESTAYRSFXIKSF*QEVPEKLPQLACGSQAFIATLLFDPSMSALPIIAX 576
           L ++F  H+DCE     +   +   Q++   LP+L C         L  PS S  PI+A 
Sbjct: 132 LCKVFGAHKDCEVAPLPTIYKRQKKQDLT-LLPRLECSGTNTTYCSLDLPSSSDPPILAS 190

Query: 577 QNS 585
           QN+
Sbjct: 191 QNT 193


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,703,382
Number of Sequences: 237096
Number of extensions: 1828457
Number of successful extensions: 2785
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2782
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)