Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_I01
         (849 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U85946-1|AAB53388.1|  708|Homo sapiens brain secretory protein h...    31   7.0  
BC041126-1|AAH41126.1|  708|Homo sapiens exocyst complex compone...    31   7.0  

>U85946-1|AAB53388.1|  708|Homo sapiens brain secretory protein
           hSec10p protein.
          Length = 708

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 22/96 (22%), Positives = 42/96 (43%)
 Frame = +2

Query: 179 FNKIMSTLKLTSEVRSGLYSHWRDVFEHVRSTAKKKKHDADQNTSSGTPQERECSIRKSC 358
           F K +  L+ +++V    + H++++ EH+   A K  H  DQ     TP++R    +K  
Sbjct: 78  FAKKVQELQKSNQVA---FQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLM 134

Query: 359 NNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRLHHMA 466
              +     +L  +    S  +   A    +LH +A
Sbjct: 135 KYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIA 170


>BC041126-1|AAH41126.1|  708|Homo sapiens exocyst complex component
           5 protein.
          Length = 708

 Score = 30.7 bits (66), Expect = 7.0
 Identities = 22/96 (22%), Positives = 42/96 (43%)
 Frame = +2

Query: 179 FNKIMSTLKLTSEVRSGLYSHWRDVFEHVRSTAKKKKHDADQNTSSGTPQERECSIRKSC 358
           F K +  L+ +++V    + H++++ EH+   A K  H  DQ     TP++R    +K  
Sbjct: 78  FAKKVQELQKSNQVA---FQHFQELDEHISYVATKVCHLGDQLEGVNTPRQRAVEAQKLM 134

Query: 359 NNVSVTSMEDLSHEEIVTSYVLAHVAQFDCRLHHMA 466
              +     +L  +    S  +   A    +LH +A
Sbjct: 135 KYFNEFLDGELKSDVFTNSEKIKEAADIIQKLHLIA 170


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,403,356
Number of Sequences: 237096
Number of extensions: 2046943
Number of successful extensions: 11095
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11095
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)