Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_H08
(1031 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 42 2e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.14
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.15
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 31 0.26
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.46
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 0.50
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.9
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 2.5
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 28 2.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.5
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 5.7
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.7
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 7.5
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 7.5
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 41.5 bits (93), Expect = 2e-04
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPPPPPPP + PPPPPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 34.3 bits (75), Expect = 0.028
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -3
Query: 630 PP--PPPPPPXXXXXKKXPPPPPPXKXYXPXGXXXXPXKKXXKKKKXXKK 487
PP PPPPPP PPPPP Y P + +K+ ++
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTPAQSGNLEKQLNER 54
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 9 PPPPPPPP 16
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 6e-04
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPPPPPPP PPPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
Score = 36.7 bits (81), Expect = 0.005
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPPPPPP PPPPPP
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.20
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 642 GXXXPPPPPPPPXXXXXKKXPPPPP 568
G PPPPPP PPPPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.5 bits (68), Expect = 0.20
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -1
Query: 629 PPPPPPPXXXXXXKKXPPPXPXXKXXXXGGXXXXP 525
PPPPPPP PPP P G P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAP 795
Score = 29.5 bits (63), Expect = 0.81
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXPPPPPP 565
P P PPP PPPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
P P P PP PPPPPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPP 767
Score = 26.6 bits (56), Expect = 5.7
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXPPPPPPXKXYXPXGXXXXP 526
P P P P PPPPPP G P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPP 568
P P PPP PPPPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPP 768
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 761 PPPPPPPP 768
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -3
Query: 645 GGXXXPPPPPPPPXXXXXKKXPPPPP 568
G PPPPPPP + P P
Sbjct: 772 GAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 26.6 bits (56), Expect = 5.7
Identities = 10/26 (38%), Positives = 11/26 (42%)
Frame = -1
Query: 644 GGXXXPPPPPPPXXXXXXKKXPPPXP 567
G PPPPPPP + P P
Sbjct: 772 GAGPPPPPPPPPAVSAGGSRYYAPAP 797
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 775 PPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 776 PPPPPPPP 783
Score = 25.8 bits (54), Expect = 10.0
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPPPPP P P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPP 753
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 26.6 bits (56), Expect(2) = 0.14
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 0.14
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXPPPPPP 565
PP P PPPPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.15
Identities = 14/30 (46%), Positives = 15/30 (50%), Gaps = 8/30 (26%)
Frame = -3
Query: 630 PPPPPPP--------PXXXXXKKXPPPPPP 565
PPPPPPP P + PPPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 29.1 bits (62), Expect = 1.1
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 8/42 (19%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXP--------PPPPPXKXYXPXGXXXXP 526
PPPPPPP P PPPPP + G P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.3 bits (60), Expect = 1.9
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 10/44 (22%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXP----------PPPPPXKXYXPXGXXXXP 526
PPPPPPP K P PPPPP G P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP 354
Score = 27.1 bits (57), Expect = 4.3
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 5/27 (18%)
Frame = -3
Query: 630 PPPPPPPPXXXXX-----KKXPPPPPP 565
PP PPP KK PPPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 26.6 bits (56), Expect = 5.7
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +3
Query: 150 KXXPKXPPGPL*XXRGXPPF*XGFLTXKFPPXGXP 254
K P PP P RG PP G PP P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.2 bits (55), Expect = 7.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
P PPP PP PP PP
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPP 272
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 31.1 bits (67), Expect = 0.26
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 642 GXXXPPPPPPPPXXXXXKKXPPPPP 568
G PPPPPPPP K P P
Sbjct: 303 GGLPPPPPPPPPSNDFWKDSNEPAP 327
Score = 29.9 bits (64), Expect = 0.61
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 645 GGXXXPPPPPPPPXXXXXKKXPPPPPPXK 559
GG PPPPPPP P P K
Sbjct: 303 GGLPPPPPPPPPSNDFWKDSNEPAPADNK 331
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.46
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPPP PP PPPP P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 5/27 (18%)
Frame = -3
Query: 630 PPPP---PPPPXXXXXKKXPP--PPPP 565
PPPP PPPP PP PPPP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 26.6 bits (56), Expect(2) = 0.50
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 6.5
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -3
Query: 630 PPPPPPPP 607
P PPPPPP
Sbjct: 905 PTPPPPPP 912
Score = 21.8 bits (44), Expect(2) = 0.50
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = -3
Query: 582 PPPPPPXKXYXPXGXXXXPXKKXXKKKKXXKKXXG 478
PPPPPP G P K K G
Sbjct: 947 PPPPPPPLVSAAGGKFVSPAVSNNISKDDLHKTTG 981
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = -3
Query: 582 PPPPPP 565
PPPPPP
Sbjct: 946 PPPPPP 951
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.9
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPP 571
P PPPPPP P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 591 KKXPPPPPPXKXYXPXGXXXXP 526
K PPPPPP + Y P P
Sbjct: 203 KAQPPPPPPQQNYPPAASSSAP 224
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 627 PPPPPPPXXXXXKKXPPPPPPXKXYXP 547
P PP P K PPPPP P
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISP 755
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -3
Query: 621 PPPPPXXXXXKKXPPPPPPXKXYXPXG 541
PPPPP K PP P P G
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAG 1908
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 1095 PPPPPPPP 1102
Score = 25.8 bits (54), Expect = 10.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -3
Query: 627 PPPPPPPXXXXXKK 586
PPPPPPP KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2
Query: 853 PPPPPPPP 830
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Score = 26.6 bits (56), Expect = 5.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3
Query: 630 PPPPPPPP 607
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 26.2 bits (55), Expect = 7.5
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 527 GXXXXPXGXXFXXGGGGGGXFFXXXXXGGGGGGGGXXXPP 646
G P G GG GGG GG GGG G P
Sbjct: 232 GFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 7.5
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = -3
Query: 630 PPPPPPPPXXXXXKKXPPPPPP 565
PPP PP PP PPP
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPPP 1213
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,197,690
Number of Sequences: 5004
Number of extensions: 34326
Number of successful extensions: 630
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 238
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 539240220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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