Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_H07
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 28 2.0
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 27 2.6
SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2 |Schizosacch... 27 4.6
SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|... 27 4.6
SPBC32H8.13c |mok12||alpha-1,3-glucan synthase Mok12|Schizosacch... 27 4.6
SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces pom... 26 6.1
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 26 6.1
SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|... 26 8.1
SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1... 26 8.1
SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein Ug... 26 8.1
SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces po... 26 8.1
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 26 8.1
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 280 SCCVLSFRPVL*CCYKEQVSMIWST 206
SC +L +PV C Y E+++ W T
Sbjct: 289 SCTILKSKPVSLCVYPEKITFNWLT 313
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +1
Query: 79 KNRSY*RTFPLFIM*TPKEMGTVWFPDPDFVKQFEGPVMYPDESTKSL 222
KN SY + P+ + + + + D +++ EG V+Y D+ST SL
Sbjct: 101 KNDSYKQKEPITVSHFGESIFLPYHQDIEWITSTEGTVLYYDQSTFSL 148
>SPAC2G11.02 |urb2||ribosome biogenesis protein Urb2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1318
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/32 (31%), Positives = 20/32 (62%)
Frame = -2
Query: 241 CYKEQVSMIWSTHQDT*LALQIVSQSLDQGTK 146
CY EQ + + H+DT +++V+ +L+ +K
Sbjct: 578 CYLEQCLRLNTLHEDTTFPMRVVNYALEYSSK 609
>SPCC285.07c |wtf18||wtf element Wtf18|Schizosaccharomyces pombe|chr
3|||Manual
Length = 402
Score = 26.6 bits (56), Expect = 4.6
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 160 PDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAEKKVRNM--ILNFGPQHPAAHGVLRLV 333
P++ + EG + + +K PVP +S P E N+ F HP + +LRL+
Sbjct: 32 PEYNSEEEGTLPLYSDISKLANPVPEDSSTGPTEIANPNVERRQEFKDSHPNIYFLLRLL 91
Query: 334 LEL 342
+ +
Sbjct: 92 ISV 94
>SPBC32H8.13c |mok12||alpha-1,3-glucan synthase
Mok12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2352
Score = 26.6 bits (56), Expect = 4.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 411 DQFFSTTVQETYVRICCTDCLSVQFQYETQHPVSGWML 298
D+ S TV E+Y +I C + + Q H + GW L
Sbjct: 1901 DKEKSCTVSESYKQIDCDTYEATRLQKLLLHSIGGWPL 1938
>SPBC17G9.11c |pyr1||pyruvate carboxylase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1185
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/50 (24%), Positives = 24/50 (48%)
Frame = +1
Query: 439 PYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKYIRTLFAEITRLLNH 588
P++D + V C++ Y K++ + R + ++T + RLL H
Sbjct: 418 PHYDSM-LVKCTCHDATYEYTRRKMIRSLIEFRVRGVKTNIPFVLRLLMH 466
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 3 LAFRTELS-KMASFLNVLLRKSPNFGQKSVLLKNIPAVHNVNS 128
++FR L+ +++ N+L+R SP F S + +IP + S
Sbjct: 1880 ISFRKSLALSKSAYHNLLVRDSPKFNPDSQITYSIPVTNTKQS 1922
>SPCC1906.04 |wtf20||wtf element Wtf20|Schizosaccharomyces pombe|chr
3|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 8.1
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 160 PDFVKQFEGPVMYPDESTKSLKPVPYNSIIKPAEKKVRNM--ILNFGPQHPAAHGVLRLV 333
P++ + EG + + +K PVP +S P E N+ F HP + +LRL+
Sbjct: 32 PEYNSEEEGALPPYSDISKLANPVPEDSSTGPTEIANPNVERRQEFKDSHPNIYFLLRLL 91
Query: 334 LEL 342
+ +
Sbjct: 92 ISV 94
>SPAC1142.08 |fhl1|SPAC8C9.01|fork head transcription factor Fhl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 743
Score = 25.8 bits (54), Expect = 8.1
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +1
Query: 139 GTVWFPDPDFVKQFEG 186
G+ W DP ++ QFEG
Sbjct: 362 GSFWMLDPSYIDQFEG 377
>SPAC1B2.02c |ugo1||mitochondrial fusion and transport protein
Ugo1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 421
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 212 VDSSGYMTGPSNCFTKS 162
VD+SGY+T PSN +S
Sbjct: 130 VDASGYVTDPSNLIERS 146
>SPCP1E11.05c |||sterol O-acyltransferase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 472
Score = 25.8 bits (54), Expect = 8.1
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2
Query: 320 CCVSYWNWTER 352
CC+S W+WT R
Sbjct: 157 CCLSNWSWTHR 167
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -3
Query: 411 DQFFSTTVQETYVRICCTDCL 349
D+FF T Q VR C DCL
Sbjct: 414 DRFFPGTFQTGVVRTNCVDCL 434
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,386,782
Number of Sequences: 5004
Number of extensions: 67634
Number of successful extensions: 181
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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