Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_H05
(905 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.032
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 1.6
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 28 1.6
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 27 3.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.032
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +2
Query: 590 PXPXXXXGGXXXPPXXXFXGGXGGXXPPPPPP 685
P P GG PP G G PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPP 602
PP P GG PPP PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.30
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPP 602
PPP GG PPP PPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXG 617
PPPP G G PPP PPPPP G
Sbjct: 764 PPPPPGVAGAGPPPP----------PPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 162 PRGXPXXXTPPXPKXXXXGXXPPPXPPXXXFFPPXPP 272
P P P P G PPP PP P PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + K GE + + P PPP PPP +
Sbjct: 203 PGEHMPPP-PMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 251
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 247
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 260
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 273
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 286
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 299
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 312
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 325
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/39 (33%), Positives = 15/39 (38%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPP G PPP + + PPPP G P
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMP 338
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 3/65 (4%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL---PXXFFSP 261
PG PPP + + GE + + P PPP PPP + P P
Sbjct: 281 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 339
Query: 262 XXPPF 276
PPF
Sbjct: 340 --PPF 342
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPP 599
PPP G PPP + + PPPP
Sbjct: 313 PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + + GE + + P PPP PPP +
Sbjct: 216 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 264
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + + GE + + P PPP PPP +
Sbjct: 229 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 277
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + + GE + + P PPP PPP +
Sbjct: 242 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 290
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + + GE + + P PPP PPP +
Sbjct: 255 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 303
Score = 26.6 bits (56), Expect = 4.8
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = +1
Query: 91 PGTRFPPPLXKNLKXGEKLXKTXIPGGPXXXXPPPXXXXXXXGXXPPPXL 240
PG PPP + + GE + + P PPP PPP +
Sbjct: 268 PGEHMPPPPMHH-EPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPM 316
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPP 602
PPPP PP PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPP 602
PPPP PP PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 26.2 bits (55), Expect = 6.4
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +3
Query: 513 PPPPXGGGGXXSPPPXXXXKXKKXXPPPPPXXGXGXXXP 629
PPPP PP PP PP G P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 629 PXXXFXGGXGGXXPPPPP 682
P F G GG PPPPP
Sbjct: 682 PSGKFEEGTGGRAPPPPP 699
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,579,302
Number of Sequences: 5004
Number of extensions: 22150
Number of successful extensions: 205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 162
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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