Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_G24
(859 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 39 7e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 36 4e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 6e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 36 6e-04
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 34 0.001
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.008
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 31 0.010
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.018
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 31 0.018
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 30 0.024
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 28 0.13
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 23 4.8
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 22 6.3
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
V S+ +WRPD+VL NA A +A + + G V W + + ++ + D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 519 XTCXFRFG 542
TC +FG
Sbjct: 165 QTCVLKFG 172
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 38.7 bits (86), Expect = 7e-05
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
V S+ +WRPD+VL NA A +A ++ G V W + + ++ + D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 519 XTCXFRFG 542
TC +FG
Sbjct: 161 QTCVMKFG 168
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.9 bits (84), Expect = 1e-04
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + + D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 519 XTCXFRFG 542
TC +FG
Sbjct: 163 QTCIMKFG 170
Score = 25.8 bits (54), Expect = 0.51
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +2
Query: 191 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGLQHL 337
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 37.1 bits (82), Expect = 2e-04
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 2/77 (2%)
Frame = +3
Query: 318 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 491
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 492 QLDNWAXDMXTCXFRFG 542
+ + D TC +FG
Sbjct: 148 DVRYFPFDQQTCFMKFG 164
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +2
Query: 113 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 277
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 278 MNWIDKRLSWNA 313
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 36.3 bits (80), Expect = 4e-04
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWA 509
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 510 XDMXTCXFRFG 542
D+ TC + G
Sbjct: 162 YDVQTCVLKLG 172
Score = 22.2 bits (45), Expect = 6.3
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -2
Query: 321 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 229
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 5e-04
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 491
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 492 QLDNWAXDMXTCXFRFG 542
++ + D +C +FG
Sbjct: 161 NVEYFPFDEQSCIMKFG 177
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 35.5 bits (78), Expect = 6e-04
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDNWAXDMX 521
ER+WRPD N + + R+S +G + + RL I M+L N+ D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 522 TCXFRFG 542
+C G
Sbjct: 175 SCPLILG 181
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.5 bits (78), Expect = 6e-04
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 324 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 491
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 492 QLDNWAXDMXTCXFRFG 542
++ + D TC +FG
Sbjct: 148 DVEYFPFDEQTCFMKFG 164
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + + D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 160 QRCEMKFG 167
Score = 22.2 bits (45), Expect = 6.3
Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 5/83 (6%)
Frame = +2
Query: 92 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 256
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 257 RIQADLQMNWIDKRLSWNAGGVG 325
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.3 bits (75), Expect = 0.001
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +2
Query: 119 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 286
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 287 IDKRLSWNAG 316
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +3
Query: 354 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDMXT 524
R+W+PD N + T R+ +G V + RL I M L+N+ D
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 525 CXFRFG 542
C +FG
Sbjct: 144 CPLQFG 149
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + + + D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 191 QHCDMKFG 198
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + + + D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 191 QHCDMKFG 198
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.004
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V++NGS ++ + + + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.008
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + M + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 16/68 (23%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + M + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 31.5 bits (68), Expect = 0.010
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAX 512
V S+ +W PD+ + N+ T G V ++GSVS + + + +W
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 513 DMXTCXFRFG 542
D C FG
Sbjct: 179 DTHRCRINFG 188
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.7 bits (66), Expect = 0.018
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWAXDM 518
++ +LW+PD+++ N+A G Y V+++GS ++ + + + + D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 519 XTCXFRFG 542
C +FG
Sbjct: 123 QHCDMKFG 130
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +2
Query: 230 NIRESESTVRIQADLQMNWIDKRLSWNAGGVG 325
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 2/68 (2%)
Frame = +3
Query: 342 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWAXD 515
V R+WRPD +L N A + VS+ G V W+ + + ++ + D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 516 MXTCXFRF 539
C ++
Sbjct: 142 EQRCVLKW 149
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.9 bits (59), Expect = 0.13
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +2
Query: 140 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 298
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 299 LSWNAGGVGLQHL 337
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 22.6 bits (46), Expect = 4.8
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Frame = +2
Query: 191 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGLQHLAGVL----GTL 358
+ ++N L + + + ++ + D + N + + S AGGV + AG++ GTL
Sbjct: 239 RAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMCQPVGTL 298
Query: 359 V 361
+
Sbjct: 299 I 299
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.2 bits (45), Expect = 6.3
Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +3
Query: 351 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWAXD 515
+ LW+PD LNA + AL + S+ N +V + R+ M+ + D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 516 MXTC 527
+ C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,786
Number of Sequences: 438
Number of extensions: 4367
Number of successful extensions: 52
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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