Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_G19
(894 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 36 0.030
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 35 0.068
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 35 0.068
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 35 0.068
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 34 0.12
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.16
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.16
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.16
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.36
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 33 0.36
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 33 0.36
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 33 0.36
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 33 0.36
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.48
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.48
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 32 0.64
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 31 0.84
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 0.84
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.1
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.5
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 1.9
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 2.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.6
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 30 2.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 3.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 3.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 3.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 3.4
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 4.5
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 5.9
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 28 7.8
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 7.8
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 28 7.8
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 28 7.8
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.3 bits (80), Expect = 0.030
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GGG G G G G G+
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 145 GGCGGGSSGGCG 156
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GGG G G G G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS 151
Query: 827 XRXXGGXXAG 856
GG G
Sbjct: 152 SGGCGGGGGG 161
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GG G G G + G
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYA 182
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 183 VAPSGGGGCGGG 194
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 650 AXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPX 829
A G G G G G G G GGG G G G G G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Query: 830 RXXGGXXAG 856
GG +G
Sbjct: 137 GGCGGGSSG 145
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G G G G G GGG G G G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGC 155
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 156 GGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G G G G GGG G G G G G
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGC 124
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 125 GGGGGGCGGGGG 136
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 36.3 bits (80), Expect = 0.030
Identities = 21/72 (29%), Positives = 22/72 (30%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GGG G G G G G+
Sbjct: 85 GGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSS 144
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 145 GGCGGGSSGGCG 156
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/70 (27%), Positives = 19/70 (27%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GGG G G G G
Sbjct: 92 GGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGS 151
Query: 827 XRXXGGXXAG 856
GG G
Sbjct: 152 SGGCGGGGGG 161
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/72 (26%), Positives = 20/72 (27%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GG G G G + G
Sbjct: 123 GCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYA 182
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 183 VAPSGGGGCGGG 194
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = +2
Query: 650 AXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPX 829
A G G G G G G G GGG G G G G G
Sbjct: 77 APCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGG 136
Query: 830 RXXGGXXAG 856
GG +G
Sbjct: 137 GGCGGGSSG 145
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G G G G G GGG G G G G
Sbjct: 96 GCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGC 155
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 156 GGGGGGGCGGGG 167
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G G G G GGG G G G G G
Sbjct: 65 GCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGGC 124
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 125 GGGGGGCGGGGG 136
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P A PP R G+P G P +P PPP P +P PP
Sbjct: 258 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Query: 681 XPRRXPXPAXAP 646
P +P
Sbjct: 318 GGSPPPAGTGSP 329
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = -1
Query: 873 RGXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPP--XXPXXAPXXXX 700
R PA + PP G+P G P +P PPP P P
Sbjct: 229 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 699 PAPP-XXXPRRXPXPAXAP 646
P PP P P P +P
Sbjct: 289 PPPPRAGSPPPPPPPRGSP 307
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA-PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPX 685
P P PP G+ P A G P P PPP P PP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 684 XXPRRXPXPAXAP 646
PR P P
Sbjct: 301 PPPRGSPPTGSLP 313
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA--PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPP 688
P P PP G P A P P P +P PPP P +PP
Sbjct: 274 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPP 330
Query: 687 XXXPRRXPXPAXAP 646
++ P +P
Sbjct: 331 PPPRQKRQAPERSP 344
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P A PP R G+P G P +P PPP P +P PP
Sbjct: 279 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Query: 681 XPRRXPXPAXAP 646
P +P
Sbjct: 339 GGSPPPAGTGSP 350
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = -1
Query: 873 RGXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPP--XXPXXAPXXXX 700
R PA + PP G+P G P +P PPP P P
Sbjct: 250 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 699 PAPP-XXXPRRXPXPAXAP 646
P PP P P P +P
Sbjct: 310 PPPPRAGSPPPPPPPRGSP 328
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA-PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPX 685
P P PP G+ P A G P P PPP P PP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 684 XXPRRXPXPAXAP 646
PR P P
Sbjct: 322 PPPRGSPPTGSLP 334
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA--PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPP 688
P P PP G P A P P P +P PPP P +PP
Sbjct: 295 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPP 351
Query: 687 XXXPRRXPXPAXAP 646
++ P +P
Sbjct: 352 PPPRQKRQAPERSP 365
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.1 bits (77), Expect = 0.068
Identities = 19/72 (26%), Positives = 23/72 (31%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P A PP R G+P G P +P PPP P +P PP
Sbjct: 264 PPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Query: 681 XPRRXPXPAXAP 646
P +P
Sbjct: 324 GGSPPPAGTGSP 335
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/79 (27%), Positives = 26/79 (32%), Gaps = 3/79 (3%)
Frame = -1
Query: 873 RGXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPP--XXPXXAPXXXX 700
R PA + PP G+P G P +P PPP P P
Sbjct: 235 RQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 699 PAPP-XXXPRRXPXPAXAP 646
P PP P P P +P
Sbjct: 295 PPPPRAGSPPPPPPPRGSP 313
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/73 (27%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA-PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPX 685
P P PP G+ P A G P P PPP P PP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 684 XXPRRXPXPAXAP 646
PR P P
Sbjct: 307 PPPRGSPPTGSLP 319
Score = 28.3 bits (60), Expect = 7.8
Identities = 19/74 (25%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -1
Query: 861 PAPAXXPPXXRXGA--PXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPP 688
P P PP G P A P P P +P PPP P +PP
Sbjct: 280 PPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSP---PTGSLPPPQAGGSPPPAGTGSPP 336
Query: 687 XXXPRRXPXPAXAP 646
++ P +P
Sbjct: 337 PPPRQKRQAPERSP 350
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 34.3 bits (75), Expect = 0.12
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = +2
Query: 665 GXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPXRXXGG 844
G RG GG G G G GGG G+ G G G G+P GG
Sbjct: 48 GGDRGGFRGGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGRGG 107
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -1
Query: 870 GXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAP 691
G P PP G GP P P P PPP P P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 776
Query: 690 PXXXPRRXPXP 658
P P P
Sbjct: 777 PGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -1
Query: 855 PAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXXXP 676
P P G P GP P P P PPP P P PP P
Sbjct: 708 PITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP 765
Query: 675 RRXPXPAXAP 646
P P P
Sbjct: 766 GGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXG--PPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXX 699
G P P P PP P G PP P PPP P P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFK 781
Query: 698 QXPXXPXPAXXPTPXXP 648
P P P P P
Sbjct: 782 GGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -1
Query: 870 GXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAP 691
G P PP G GP P P P PPP P P P P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 776
Query: 690 PXXXPRRXPXP 658
P P P
Sbjct: 777 PGGFKGGPPPP 787
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -1
Query: 855 PAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXXXP 676
P P G P GP P P P PPP P P PP P
Sbjct: 708 PITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP 765
Query: 675 RRXPXPAXAP 646
P P P
Sbjct: 766 GGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXG--PPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXX 699
G P P P PP P G PP P PPP P P
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFK 781
Query: 698 QXPXXPXPAXXPTPXXP 648
P P P P P
Sbjct: 782 GGPPPPPPPGMFAPMAP 798
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.16
Identities = 20/71 (28%), Positives = 20/71 (28%)
Frame = -1
Query: 870 GXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAP 691
G P PP G GP P P P PPP P P P P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPP 359
Query: 690 PXXXPRRXPXP 658
P P P
Sbjct: 360 PGGFKGGPPPP 370
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/70 (28%), Positives = 20/70 (28%)
Frame = -1
Query: 855 PAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXXXP 676
P P G P GP P P P PPP P P PP P
Sbjct: 291 PITGGPPPPPGLPPITG-GPPPPPPPGGLPPITGGPPPPPPPG-GLPPISGGPPPPPPPP 348
Query: 675 RRXPXPAXAP 646
P P P
Sbjct: 349 GGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/77 (27%), Positives = 21/77 (27%), Gaps = 2/77 (2%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXG--PPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXX 699
G P P P PP P G PP P PPP P P
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP---PPPPPGGCPPPPPPPPPGGFK 364
Query: 698 QXPXXPXPAXXPTPXXP 648
P P P P P
Sbjct: 365 GGPPPPPPPGMFAPMAP 381
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXGPPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXXQX 693
G P P P P P GPP A P P P P
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGN-----DGAPGAPGGPGEPGASEQGG 216
Query: 692 PXXPXPAXXPTPXXPXG 642
P P PA P P P G
Sbjct: 217 PGEPGPAGPPGPAGPAG 233
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXGPPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXXQX 693
G P P P P P GPP A P P P P
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGN-----DGAPGAPGGPGEPGASEQGG 216
Query: 692 PXXPXPAXXPTPXXPXG 642
P P PA P P P G
Sbjct: 217 PGEPGPAGPPGPAGPAG 233
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.7 bits (71), Expect = 0.36
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = -1
Query: 858 APAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPP--PXXPXXAPXXXXPAP-P 688
+P PP + A P P P P PP P P P P+P P
Sbjct: 121 SPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEP 180
Query: 687 XXXPRRXPXPAXAP 646
PR P P P
Sbjct: 181 RNPPRTPPSPIPPP 194
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXGPPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXXQX 693
G P P P P P GPP A P P P P
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGN-----DGAPGAPGGPGEPGASEQGG 216
Query: 692 PXXPXPAXXPTPXXPXG 642
P P PA P P P G
Sbjct: 217 PGEPGPAGPPGPAGPAG 233
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 32.7 bits (71), Expect = 0.36
Identities = 22/77 (28%), Positives = 22/77 (28%)
Frame = -2
Query: 872 GAXXPXXPXXXPRXXXAPPXXXPXGPPXRAHPXXRRXXXTXXXXRPPPXPXXPXXXXXQX 693
G P P P P P GPP A P P P P
Sbjct: 162 GPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGN-----DGAPGAPGGPGEPGASEQGG 216
Query: 692 PXXPXPAXXPTPXXPXG 642
P P PA P P P G
Sbjct: 217 PGEPGPAGPPGPAGPAG 233
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 870 GXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPP--XXPXXAPXXXXP 697
G P P PP G P P P P PPP P P P
Sbjct: 294 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 353
Query: 696 APPXXXPRRXPXP 658
P P P P
Sbjct: 354 RYPSAGPGMYPPP 366
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P PP R G P G P P PPP P P P PP
Sbjct: 314 PGMPPPPPPSRFGPP---GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 681 XP 676
P
Sbjct: 371 PP 372
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.48
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 2/73 (2%)
Frame = -1
Query: 870 GXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPP--XXPXXAPXXXXP 697
G P P PP G P P P P PPP P P P
Sbjct: 304 GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPP 363
Query: 696 APPXXXPRRXPXP 658
P P P P
Sbjct: 364 RYPSAGPGMYPPP 376
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P PP R G P G P P PPP P P P PP
Sbjct: 324 PGMPPPPPPSRFGPP---GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 681 XP 676
P
Sbjct: 381 PP 382
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
protein R08B4.1b protein.
Length = 1160
Score = 31.9 bits (69), Expect = 0.64
Identities = 20/69 (28%), Positives = 21/69 (30%)
Frame = +2
Query: 656 AGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPXRX 835
+G G G G G G G GGG G G G G G
Sbjct: 786 SGGGGGGGNGGSGGGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDG 845
Query: 836 XGGXXAGAG 862
GG AG G
Sbjct: 846 NGGAGAGNG 854
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/72 (26%), Positives = 19/72 (26%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G GGG G G GA
Sbjct: 799 GGGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAG 858
Query: 827 XRXXGGXXAGAG 862
G AG G
Sbjct: 859 AGNGNGAGAGNG 870
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 0.84
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G G GG G G G GGG G G G G G
Sbjct: 121 GCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCGGGGGGCG-GGGGGGCG 179
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 180 GGGGGGCGGGCG 191
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/68 (29%), Positives = 20/68 (29%)
Frame = +2
Query: 659 GXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPXRXX 838
G G G GG G G G GGG G G G P P
Sbjct: 64 GCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAP----PPPPPACG 119
Query: 839 GGXXAGAG 862
GG G G
Sbjct: 120 GGCGGGGG 127
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = -1
Query: 858 APAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPP 688
AP PP G P P P AP PPP A P PP
Sbjct: 500 APNPPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = -2
Query: 860 PXXPXXXPRXXXAPPXXX-PXGPPXRAHPXXRRXXXTXXXXRPPPXP 723
P P P APP P GPP R HP R RP P
Sbjct: 73 PQGPSDLPGPSGAPPGPPHPSGPPHRPHPHPSRRPRPTRLPRPSRSP 119
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/73 (28%), Positives = 25/73 (34%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPP-X 685
P P+ PP R +GP P AP P P P P P P
Sbjct: 55 PDPSSPPPAPRPSGQPPGPQGPSDLPGPSGAP--------PGPPHPSGPPHRPHPHPSRR 106
Query: 684 XXPRRXPXPAXAP 646
P R P P+ +P
Sbjct: 107 PRPTRLPRPSRSP 119
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.1 bits (67), Expect = 1.1
Identities = 23/74 (31%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXG--GAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXG 820
G +G G RG G G G G G GGG G G G G G
Sbjct: 59 GGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGGGGGGGGGRG-GGGGGRGGGGGG 117
Query: 821 APXRXXGGXXAGAG 862
R GG G G
Sbjct: 118 GGGRGGGGGGRGGG 131
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPPXXXP 659
P PP P P S P PPPP P
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPP 522
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPPXXXPRXXP 647
P PP P P P PPPP P P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPPPMPSYSP 86
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 644 RGAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGG 742
RG G G RG GG G G G GGG
Sbjct: 4 RGGRGGGGGFRGGRGGGGGGGFRGGRGGDRGGG 36
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/76 (23%), Positives = 25/76 (32%), Gaps = 3/76 (3%)
Frame = -1
Query: 876 ARGXXPAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXP 697
+R P+P PP + P P P + PP P +P P
Sbjct: 1331 SRSSSPSPPPPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILP 1390
Query: 696 APPXXXP---RRXPXP 658
PP P ++ P P
Sbjct: 1391 PPPPPLPSEEKKNPLP 1406
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/69 (27%), Positives = 19/69 (27%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P P P A A G P P P PP P P P PP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Query: 681 XPRRXPXPA 655
P PA
Sbjct: 595 PPGGLMGPA 603
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/73 (27%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPP-PXXPXXAPXXXXPAPPX 685
P+P+ PP P + P P PP P P P P PP
Sbjct: 204 PSPSG-PPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPG 262
Query: 684 XXPRRXPXPAXAP 646
RR P P P
Sbjct: 263 PPTRRPPGPPGPP 275
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.9 bits (64), Expect = 2.6
Identities = 20/74 (27%), Positives = 21/74 (28%), Gaps = 1/74 (1%)
Frame = -1
Query: 861 PAPAXXP-PXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPX 685
P PA P P + P P AP PPP P P PP
Sbjct: 93 PVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPHYPPPPPHYPPPP 152
Query: 684 XXPRRXPXPAXAPR 643
P APR
Sbjct: 153 PAPHSAYIDHSAPR 166
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 1/73 (1%)
Frame = -1
Query: 861 PAPAXXPPXXRXGAPXXXARGPXXPXXPXXAPXXXXXXXXPPPXXPXXAPXXXXPAPPXX 682
P PA P A P P P AP P P P AP PAP
Sbjct: 84 PGPAPVPVPEPAQLAPQSAPEPT-PDAPAAAPVQETPQVAPAPETPAPAPETPAPAPVQE 142
Query: 681 XPR-RXPXPAXAP 646
P+ P P P
Sbjct: 143 TPQVVAPAPEPTP 155
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPP 671
P PP P P S P PPPP
Sbjct: 490 PPPPPLPPIATPSSVPPPPPPP 511
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPP 671
P PP P P S P PPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPP 177
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPP 671
P PP P P S P PPPP
Sbjct: 156 PPPPPPPPVSVPSSKPTPPPPP 177
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/72 (27%), Positives = 20/72 (27%)
Frame = +2
Query: 647 GAXAGXGXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAP 826
G G G GG G G G GGG G G G G G
Sbjct: 142 GGPGGYGMGGYGGGGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMG 201
Query: 827 XRXXGGXXAGAG 862
GG G G
Sbjct: 202 GGGYGGGGMGGG 213
Score = 29.1 bits (62), Expect = 4.5
Identities = 21/73 (28%), Positives = 21/73 (28%), Gaps = 1/73 (1%)
Frame = +2
Query: 647 GAXAGXGXRRGXXX-GGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGA 823
GA G G GG G G G GGG G G G G G
Sbjct: 85 GAFGGFNGGYGQGGYGGGGDFGGGMGGGGYGGGGYGGGGDGGGGYGGYGGGGYGGMGGGP 144
Query: 824 PXRXXGGXXAGAG 862
GG G G
Sbjct: 145 GGYGMGGYGGGGG 157
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +1
Query: 664 GXXAGXGXXGXWXXXXXGXXGXGGGRXXXXVXXXRRXXGXARXGGPXG 807
G G G G + G G GGG +R G GGP G
Sbjct: 824 GGYQGGGYGGGYGGGGGGGGGGGGGSYHQPYNQDQRRGGRGGGGGPPG 871
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/71 (29%), Positives = 21/71 (29%)
Frame = +1
Query: 649 GXXGVGXXAGXGXXGXWXXXXXGXXGXGGGRXXXXVXXXRRXXGXARXGGPXGXXXGGAX 828
G G G G G W G G GGGR G GG G GG
Sbjct: 33 GGWGGNRWGGGGGPGGWGNNGGGGWGRGGGRGGGD------WGGNNGGGGNWGGNGGGRG 86
Query: 829 XXRGXXXGXXG 861
G G G
Sbjct: 87 DWGGNGGGGRG 97
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 647 GAXAGX-GXRRGXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXG 790
GA AG G RG GG+G G G GG G+ G G
Sbjct: 46 GASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWG 94
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/60 (28%), Positives = 17/60 (28%)
Frame = +2
Query: 677 GXXXGGAGXXXXGAXXGXXGGGXXXXXXXXGAXXGXXGXXGPRAXXXGAPXRXXGGXXAG 856
G GG G G G GGG G G G G G GG G
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGGGGG 114
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPP 671
P PP P P + P PPPP
Sbjct: 74 PLPPPPLPLSNPPAKPTPPPPP 95
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 28.3 bits (60), Expect = 7.8
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = -3
Query: 736 PXPPXXXPXXXPXSXPXXPPPP 671
P PP P P + P PPPP
Sbjct: 296 PLPPPPLPLSNPPAKPTPPPPP 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,543,522
Number of Sequences: 27780
Number of extensions: 180452
Number of successful extensions: 1735
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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