Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_G02
         (848 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071734-1|AAL49356.1|  311|Drosophila melanogaster RH45234p pro...    30   3.5  
AM412926-1|CAL85549.1|  287|Drosophila melanogaster CG16772 prot...    30   3.5  
AM412924-1|CAL85547.1|  287|Drosophila melanogaster CG16772 prot...    30   3.5  
AE014134-3180|AAF53859.1|  311|Drosophila melanogaster CG16772-P...    30   3.5  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.1  
AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-P...    29   8.1  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.1  

>AY071734-1|AAL49356.1|  311|Drosophila melanogaster RH45234p
           protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 660 PGFKPPLSSXAPSAYLTPRHWAWLKGFRPP 749
           P F+ P S   P  +  PR+W    G+ PP
Sbjct: 204 PTFRSPYSPYQPQVFPQPRNWPSFPGYGPP 233


>AM412926-1|CAL85549.1|  287|Drosophila melanogaster CG16772 protein
           protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 660 PGFKPPLSSXAPSAYLTPRHWAWLKGFRPP 749
           P F+ P S   P  +  PR+W    G+ PP
Sbjct: 191 PTFRSPYSPYQPQVFPQPRNWPSFPGYGPP 220


>AM412924-1|CAL85547.1|  287|Drosophila melanogaster CG16772 protein
           protein.
          Length = 287

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 660 PGFKPPLSSXAPSAYLTPRHWAWLKGFRPP 749
           P F+ P S   P  +  PR+W    G+ PP
Sbjct: 191 PTFRSPYSPYQPQVFPQPRNWPSFPGYGPP 220


>AE014134-3180|AAF53859.1|  311|Drosophila melanogaster CG16772-PA
           protein.
          Length = 311

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +3

Query: 660 PGFKPPLSSXAPSAYLTPRHWAWLKGFRPP 749
           P F+ P S   P  +  PR+W    G+ PP
Sbjct: 204 PTFRSPYSPYQPQVFPQPRNWPSFPGYGPP 233


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014296-2897|AAF49349.4|  926|Drosophila melanogaster CG13731-PA
           protein.
          Length = 926

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 19/61 (31%), Positives = 26/61 (42%)
 Frame = +3

Query: 531 SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSIP*RRTKKEFAPGFKPPLSSXAPSAYLT 710
           + PP R     P +  P +   PP T    P  P  RT     P  +PP ++  P+ YL 
Sbjct: 199 TRPPTRPPTPPPTYLPPTNKPLPPVTTRLPPPPPPPRTPPPTRPPTRPP-TTRPPATYLP 257

Query: 711 P 713
           P
Sbjct: 258 P 258


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,230,160
Number of Sequences: 53049
Number of extensions: 768893
Number of successful extensions: 2692
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2689
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4065385896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)