Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F21
(852 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 6e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 48 8e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 47 3e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 3e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 46 3e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 3e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 44 2e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 44 2e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 3e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 42 7e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 7e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 39 7e-05
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 38 2e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 29 0.072
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.17
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 25 1.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.6
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 8.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 8.2
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.4 bits (120), Expect = 5e-09
Identities = 43/144 (29%), Positives = 62/144 (43%), Gaps = 9/144 (6%)
Frame = +3
Query: 69 IASAAECENATSLSLMIDSLLATYDRESPPDSE----IVVNLTLHLRHA---NIRESEST 227
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 228 VRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 401
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 402 VSNNGSVSWIKRLDISTPISMQVR 473
+ G V W + + VR
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVR 150
Score = 26.6 bits (56), Expect = 0.29
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 463 CRLD--NWPNDMQTCTFKFGSRMHNSDEMD 546
C +D +P D QTC KFGS ++ ++D
Sbjct: 145 CEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V++NGS ++
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 48.8 bits (111), Expect = 6e-08
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 76 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 133
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V++NGS ++
Sbjct: 134 NKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYV 170
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 179 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 211
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.4 bits (110), Expect = 8e-08
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V++NGS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYV 102
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 47.6 bits (108), Expect = 1e-07
Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Frame = +3
Query: 87 CENATSLSLMIDSLLATYDRESPPDSEIVVNLTLHLR-------HANIRESESTVRILAD 245
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 246 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 419
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 420 VSW 428
V W
Sbjct: 137 VEW 139
Score = 26.6 bits (56), Expect = 0.29
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 463 CRLD--NWPNDMQTCTFKFGSRMHNSDEMD 546
C +D +P D QTC KFGS ++ ++D
Sbjct: 149 CEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.8 bits (106), Expect = 3e-07
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Frame = +3
Query: 57 LTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSEIVVNLTLHLRH---ANIRE 215
++C +A + + D LL+ Y+R P + V + L L N++
Sbjct: 5 ISCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKN 64
Query: 216 SESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL 392
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 65 QIMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEV 119
Query: 393 ----RARVSNNGSVSW 428
+A + + G V W
Sbjct: 120 TIMTKAILHHTGKVVW 135
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 463 CRLD--NWPNDMQTCTFKFGSRMHNSDEMD 546
C +D +P D QTC KFGS ++ +D
Sbjct: 145 CEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 46.8 bits (106), Expect = 3e-07
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSEIVVNLT--LHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y+R P LT L L+ + + E +++ ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 428
WN E+G L V SE +W PD+VL N A G+Y + +A + G VSW
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSW 148
Score = 26.6 bits (56), Expect = 0.29
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +1
Query: 469 LDNWPNDMQTCTFKFGSRMHNSDEMD 546
++ +P D Q+C KFGS +N ++D
Sbjct: 162 VEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V+++GS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.095
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V+++GS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.095
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V+++GS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 29.1 bits (62), Expect = 0.054
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V+++GS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.095
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 46.4 bits (105), Expect = 3e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 2/97 (2%)
Frame = +3
Query: 147 ESPPDSEIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSS 323
ES P E+ +TL + ++ E + A L++ W+D L WN E+ G ++
Sbjct: 8 ESEP-LEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITP 65
Query: 324 ERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWI 431
+LW+PD+++ N+A G Y V+++GS ++
Sbjct: 66 NKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYV 102
Score = 28.3 bits (60), Expect = 0.095
Identities = 13/33 (39%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVI 555
C++D W P D Q C KFGS ++ +++D V+
Sbjct: 111 CKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVL 143
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 46.4 bits (105), Expect = 3e-07
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = +3
Query: 45 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSE---IVVNLTLHLRHA-NI 209
+ + A+A++ + +++ LL TY+ E P +E +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 210 RESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGD 383
E + L++ W D + WN ++G L + RLW+PDV++ N+A G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGT 123
Query: 384 YALRARVSNNGSVSWI 431
Y V NNG+ ++
Sbjct: 124 YPTNVVVKNNGTCLYV 139
Score = 28.3 bits (60), Expect = 0.095
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 6/52 (11%)
Frame = +1
Query: 463 CRLD-NW-PNDMQTCTFKFGSRMHNSDEMDFVIDKR----IYXMFESGXWDV 600
C++D W P D Q C KFGS ++ ++D + I +G WD+
Sbjct: 148 CKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNGEWDL 199
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.0 bits (104), Expect = 4e-07
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Frame = +3
Query: 114 MIDSLLATYDRESPP--DSEIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSW 428
W E+G L V S+ +WRPD+VL NA A +A + + G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEW 143
Score = 26.2 bits (55), Expect = 0.38
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +1
Query: 463 CRLD--NWPNDMQTCTFKFGSRMHNSDEMD 546
C +D +P D QTC KFGS ++ ++D
Sbjct: 153 CEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 43.6 bits (98), Expect = 2e-06
Identities = 26/95 (27%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +3
Query: 87 CENATSLSLMIDS---LLATYDRESPPDSEIV--VNLTLHLRHANIRESESTVRILADLQ 251
C++ TS S + L YDR+ P+ + ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 252 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 353
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 26.6 bits (56), Expect = 0.29
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Frame = +1
Query: 460 LCRLDN--WPNDMQTCTFKFGSRMHNSDEM 543
+C D+ WP D+ CT S H S+E+
Sbjct: 158 VCEYDHTWWPYDILNCTIHIASWSHGSNEI 187
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 43.6 bits (98), Expect = 2e-06
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Frame = +3
Query: 168 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 344
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 345 VVLLNAAATTAGDYALRAR--VSNNGSVSWI 431
+L N A + VS+ G V W+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWL 122
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 43.2 bits (97), Expect = 3e-06
Identities = 32/133 (24%), Positives = 59/133 (44%), Gaps = 7/133 (5%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLHLRHAN-IRESESTVRILADLQMNW 260
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 261 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWI 431
+D+RL++ G+ + + R+W+PD N + T R+ +G V +
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 432 KRLDISTPISMQV 470
RL I M +
Sbjct: 122 SRLTIKAGCPMNL 134
Score = 25.0 bits (52), Expect = 0.88
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 469 LDNWPNDMQTCTFKFGS 519
L+N+P D Q C +FGS
Sbjct: 134 LENFPMDTQRCPLQFGS 150
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 43.2 bits (97), Expect = 3e-06
Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 10/115 (8%)
Frame = +3
Query: 114 MIDSLLATYDRESPP--DSEIVVNLTLHLRHANIRESESTVRILAD---LQMNWIDKRLS 278
+ D LL+ Y++ P ++ V+ + + L+ + + + +I+ ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 279 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSW 428
W E+G L V S+ +WRPD+VL N A G+Y + +A V +G V W
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVW 143
Score = 24.6 bits (51), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +1
Query: 478 WPNDMQTCTFKFGSRMHNSDEMD 546
+P D+QTC K GS ++ ++D
Sbjct: 160 FPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 41.9 bits (94), Expect = 7e-06
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAG 380
N+ E ++ L+ W D +L W+ ++G + +++W+PD+VL N A G
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWKPDIVLFNNA---DG 121
Query: 381 DYALRAR----VSNNGSVSWI 431
+Y +R + + NG V W+
Sbjct: 122 NYEVRYKSNVLIYPNGDVLWV 142
Score = 33.9 bits (74), Expect = 0.002
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Frame = +1
Query: 454 QFLCRLD--NWPNDMQTCTFKFGSRMHNSDEMDFVI--DKRIYXM---FESGXWDVTDL 609
Q C +D +P D QTC KFGS N D++ + +K + ++SG WD+ ++
Sbjct: 148 QSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDIINV 206
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 38.7 bits (86), Expect = 7e-05
Identities = 29/132 (21%), Positives = 57/132 (43%), Gaps = 8/132 (6%)
Frame = +3
Query: 102 SLSLMIDSLLATYDRESPPD----SEIVVNLTLHLRHAN-IRESESTVRILADLQMNWID 266
++++++++LL Y+ P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 267 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKR 437
RLS+ S + ER+WRPD N + + R+S +G + + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 438 LDISTPISMQVR 473
L I M++R
Sbjct: 156 LTIKAKCPMELR 167
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 38.7 bits (86), Expect = 7e-05
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 13/153 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLH-LRHANIRESESTVRILADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 414 GSVSWIKRLDISTPISMQVRQLAQRHADLHVQV 512
GS++ RL I+ M ++ H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 37.5 bits (83), Expect = 2e-04
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 13/153 (8%)
Frame = +3
Query: 93 NATSLSLMIDSLLATYDRESPPD---SEIVVNLTLH-LRHANIRESESTVRILADLQMNW 260
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 261 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNA------AATTAGDYALRARVSNN 413
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEF---IRIHHS 123
Query: 414 GSVSWIKRLDISTPISMQVRQLAQRHADLHVQV 512
GS++ RL I+ M ++ H+++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.5 bits (78), Expect = 6e-04
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 475 NWPNDMQTCTFKFGSRMHNSDEMDFVIDKRIYXM 576
+WP D C FGS +H+ +E++ +DK+ + M
Sbjct: 175 SWPYDTHRCRINFGSWVHSGEEVNIFLDKKGFHM 208
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 28.7 bits (61), Expect = 0.072
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = +1
Query: 433 SAWTLALQFLCRLDNWPNDMQTCTFKFGSRMHNSDEMDFV 552
S TL L + +++P+D Q C+ S H + ++ F+
Sbjct: 124 SKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVFI 163
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 445 LALQFLCRLDN--WPNDMQTCTFKFGSRMHNSDEMDFVID 558
L L+ C ++ +P+D Q C + S H +DEM F D
Sbjct: 157 LTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIFQWD 196
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 24.6 bits (51), Expect = 1.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 466 RLDNWPNDMQTCTFKFGSRMHNSDEM 543
RL+ +P D+Q C F S HN +M
Sbjct: 145 RLEKFPFDVQECPLIFESWTHNVLDM 170
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.6
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 110 GQ*CCVFAFCRTSYSTSEEKXVTRII 33
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 8.2
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 558 QKNIXYVRVRXVGCDGSCPLRC 623
QKN+ +R G +G P RC
Sbjct: 73 QKNLYQSHLRSHGKEGEDPYRC 94
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 8.2
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 311 PSAAAPFPCVPTQS 270
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,186
Number of Sequences: 438
Number of extensions: 5191
Number of successful extensions: 81
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 64
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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