Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F18
(825 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 38 0.013
02_05_0686 - 30900748-30902167,30903442-30904742 33 0.21
07_03_0965 - 22996575-22999112,22999202-22999636,22999717-229998... 33 0.36
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.64
04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296 31 0.84
10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266 28 1.4
07_03_0907 - 22490158-22490555,22490647-22491250 30 2.6
11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260... 29 3.4
07_01_0974 + 8211602-8212051 29 3.4
04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066 29 4.5
12_02_0640 - 21447470-21448309 29 5.9
12_02_0635 - 21430245-21431156 29 5.9
01_03_0005 + 11568545-11569119,11569179-11569191 29 5.9
01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574 29 5.9
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 28 7.8
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 37.5 bits (83), Expect = 0.013
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 411 PPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPP--PPXXEKKKXKKKKXXGGGGG 581
P P K G GGG P + PP GGG PP PP + GGGGG
Sbjct: 82 PLPIKLLGLPPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGG 140
Score = 33.5 bits (73), Expect = 0.21
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Frame = +3
Query: 411 PPPXKXGGXFXXGGGGPPXXKKXXSXPP--XGGGXXXPPPPXXEKKKXKKKKXXGGGGG 581
P P GG GGGG S PP GGG PP P ++ GGGGG
Sbjct: 98 PGPLGGGGARPPGGGG---GGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGG 153
Score = 29.5 bits (63), Expect = 3.4
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 3/67 (4%)
Frame = +3
Query: 390 GGXXFFFPPPXKXGGXFXXGGGGPP---XXKKXXSXPPXGGGXXXPPPPXXEKKKXKKKK 560
GG FPP GG GGGG K S GGG P
Sbjct: 339 GGAGGVFPPTPDLGGGGGGGGGGTKVRVCAPKDISGGGGGGGGMLDKPDEAGGGGGGGSG 398
Query: 561 XXGGGGG 581
GGGGG
Sbjct: 399 GGGGGGG 405
Score = 28.3 bits (60), Expect = 7.8
Identities = 24/76 (31%), Positives = 26/76 (34%)
Frame = +3
Query: 354 GXPPXXXXXXXXGGXXFFFPPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPPPPXX 533
G PP GG PP GG GGGG P + GGG PP
Sbjct: 115 GGPPSLPPGAGGGGGA---RPPAPGGG----GGGGAP---RRVLGGGGGGGALARPPGGG 164
Query: 534 EKKKXKKKKXXGGGGG 581
+ GGGGG
Sbjct: 165 RGGALGRPPGGGGGGG 180
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 33.5 bits (73), Expect = 0.21
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = +1
Query: 412 PPXKKXGGXXXXGGGXPXPKKKXPPXPXXGGGXXXPPPPXXKKKK 546
PP K G P P K PP P G PPPP KK
Sbjct: 330 PPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKK 374
Score = 31.9 bits (69), Expect = 0.64
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = +1
Query: 412 PPXKKXGGXXXXGGGXPXPKKKXPPXPXXGGGXXXPPPPXXKKKKXKKKKXXGGG 576
PP G P P K PP P G PPPP KK GG
Sbjct: 331 PPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Frame = +1
Query: 412 PPXKKXGGXXXXGGGXPXPKKK---XPPXPXXGGGXXXPPPPXXKKKKXKKKKXXGG 573
PP K G P P PP P G PPPP KK GG
Sbjct: 329 PPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385
>07_03_0965 -
22996575-22999112,22999202-22999636,22999717-22999801,
22999888-22999957,23000050-23000293,23000396-23000482,
23000655-23000706,23000830-23001226,23001324-23001648,
23001748-23001914,23002007-23002547
Length = 1646
Score = 32.7 bits (71), Expect = 0.36
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 447 GGGGPP-XXKKXXSXPPXGGGXXXPPP---PXXEKKKXKKKKXXGGGGG 581
GGGGPP ++ S GGG P P E+++ ++ GGGGG
Sbjct: 18 GGGGPPPPRRRLRSSGGGGGGSGSGGPRDSPRSERRRGERLMLNGGGGG 66
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.9 bits (69), Expect = 0.64
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 411 PPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPPPP 527
PPP GG PP + + PP G PPPP
Sbjct: 1149 PPPPPVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPP 1187
>04_04_0183 - 23384290-23384783,23385064-23385139,23385291-23385296
Length = 191
Score = 31.5 bits (68), Expect = 0.84
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +3
Query: 354 GXPPXXXXXXXXGGXX--FFFPPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPPP 524
G PP GG ++ P GG + GGGG P + S P G PP
Sbjct: 106 GYPPPHQRGGGGGGSGGGYYTPMTMATGGYYGGGGGGYPQYGQSSSYPQYGQSSSYYPP 164
>10_08_0966 + 21921343-21921354,21923196-21923264,21924165-21924266
Length = 60
Score = 28.3 bits (60), Expect(2) = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 466 PKKKXPPXPXXGGGXXXPPPPXXKKKKXKKKK 561
P P P GG P KKKK KKKK
Sbjct: 10 PHSAPPAEPAKGGLRGLPKKKKKKKKKKKKKK 41
Score = 21.4 bits (43), Expect(2) = 1.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 535 KKKKXKKKKXXG 570
KKKK KKKK G
Sbjct: 48 KKKKKKKKKLLG 59
>07_03_0907 - 22490158-22490555,22490647-22491250
Length = 333
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +3
Query: 498 GGGXXXPPPPXXEKKKXKKKKXXGGGGGXXK 590
GGG PPP +K + GGGGG K
Sbjct: 255 GGGEDAPPPATAMRKAETFNEAAGGGGGGKK 285
>11_05_0081 -
18924353-18924462,18925068-18925187,18925569-18926086,
18927392-18927471,18927680-18927782,18928084-18928295,
18928392-18929210,18929331-18929444,18929935-18929983,
18930115-18930271,18930354-18930807,18930938-18931147
Length = 981
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +1
Query: 127 EPVSRAPLXFXXGXSXXGAPPPPPV 201
E VS APL G + GAPPPPP+
Sbjct: 46 ESVS-APLSAPSGVARRGAPPPPPI 69
>07_01_0974 + 8211602-8212051
Length = 149
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = +1
Query: 412 PPXKKXGGXXXXGGGXPXPKKKXPP-XPXXGGGXXXPPPPXXKKKKXKKKKXXGGGG 579
PP GG GGG P PP P G P P GGGG
Sbjct: 51 PPSSPVGGGGTGGGGPSPPTNPAPPAVPCNCGTTTAPAAPSPPGVYNYSAPSGGGGG 107
>04_03_0711 + 18945012-18945692,18945790-18946845,18946863-18947066
Length = 646
Score = 29.1 bits (62), Expect = 4.5
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +1
Query: 409 SPPXKKXGGXXXXGGGXPXPKKKXPPXPXXGGGXXXPPPP 528
+PP G G P P PP P G PPPP
Sbjct: 422 APPPPPPGSYAPVPWGQPPPYASYPP-PPPGSSMYNPPPP 460
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 411 PPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPPPP 527
PPP G G PP PP G PPPP
Sbjct: 423 PPPPPPGSYAPVPWGQPPPYASYPPPPP-GSSMYNPPPP 460
>12_02_0640 - 21447470-21448309
Length = 279
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 460 PXPKKKXPPXPXXGGGXXXPPPPXXKKK 543
P P+++ P P G PPPP KK
Sbjct: 212 PPPERRESPSPPRGRPRTPPPPPGSPKK 239
>12_02_0635 - 21430245-21431156
Length = 303
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +1
Query: 460 PXPKKKXPPXPXXGGGXXXPPPPXXKKK 543
P P+++ P P G PPPP KK
Sbjct: 209 PPPERRESPSPPRGRPRTPPPPPGSPKK 236
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3
Query: 390 GGXXFFFPPPXKXGGXFXXGGGGPPXXKKXXSXPPXGGGXXXPPPP 527
GG ++PPP GG GGGG GG PPPP
Sbjct: 107 GGGGIYYPPPTGGGG---GGGGG------WQQGGGGGGAYPTPPPP 143
>01_01_0187 + 1624159-1624279,1624530-1624590,1625118-1625574
Length = 212
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 527 GGGGXXXPPPXXGXGGXFFXGXG 459
GGGG PPP GG F G G
Sbjct: 66 GGGGAAAPPPTMQMGGGGFRGGG 88
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 527 GGGGXXXPPPXXGXGGXFFXGXG 459
GGGG PPP G GG G G
Sbjct: 389 GGGGPGAPPPYHGGGGGGGGGGG 411
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,488,667
Number of Sequences: 37544
Number of extensions: 520942
Number of successful extensions: 2479
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1781
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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