Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F15
(820 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0582 - 4318837-4318967,4319219-4319399,4319504-4319701,431... 253 1e-67
07_03_1272 - 25360180-25360286,25360454-25360658,25360748-253609... 250 1e-66
02_04_0452 + 23044190-23045227 30 2.5
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 5.9
09_06_0103 + 20873310-20873382,20873530-20873735 29 5.9
06_03_0979 + 26502221-26502493 29 5.9
08_01_0152 - 1190358-1190462,1190648-1190765,1191134-1192691,119... 28 7.8
02_05_0924 - 32749682-32750200,32750756-32750959,32751062-327511... 28 7.8
01_06_0902 + 32853708-32853739,32854787-32855596,32856094-328561... 28 7.8
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 28 7.8
>03_01_0582 -
4318837-4318967,4319219-4319399,4319504-4319701,
4319791-4320053,4320453-4320597
Length = 305
Score = 253 bits (619), Expect = 1e-67
Identities = 118/195 (60%), Positives = 146/195 (74%)
Frame = +1
Query: 67 ISATMSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWE 246
++A G L+ E+DV MLAA HLG +N +FQME YVYKRR+DG ++INL +TWE
Sbjct: 1 MAAVAGGAARALSQAEQDVQMMLAADVHLGTKNCDFQMERYVYKRRSDGIYIINLGKTWE 60
Query: 247 KLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAF 426
KL LAAR +VAIENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F
Sbjct: 61 KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
Query: 427 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWW 606
EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K +SIG ++W
Sbjct: 121 SEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGRNSIGCLFW 180
Query: 607 LLAREVLRLXGCASP 651
LLAR VL++ G P
Sbjct: 181 LLARMVLQMRGTILP 195
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 641 VLPRDXRWDVVVDLSXYRDP 700
+LP +WDV+VDL YRDP
Sbjct: 193 ILP-GHKWDVMVDLFFYRDP 211
>07_03_1272 -
25360180-25360286,25360454-25360658,25360748-25360945,
25361034-25361296,25361865-25362009
Length = 305
Score = 250 bits (611), Expect = 1e-66
Identities = 115/184 (62%), Positives = 140/184 (76%)
Frame = +1
Query: 100 LALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVVA 279
L+ E+D+ MLAA HLG +N +FQME YVYKRR DG ++INL +TWEKL LAAR +VA
Sbjct: 12 LSQREQDIQMMLAADVHLGTKNCDFQMERYVYKRRTDGIYIINLGKTWEKLQLAARVIVA 71
Query: 280 IENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 459
IENP D+ V S+RP+GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRLLILTDP 131
Query: 460 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMWWLLAREVLRLXG 639
DHQPI E++ NIP IA C+TDSP+R+VDI IP N K SIG ++WLLAR VL++ G
Sbjct: 132 RTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKGKQSIGCLFWLLARMVLQMRG 191
Query: 640 CASP 651
P
Sbjct: 192 TILP 195
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 641 VLPRDXRWDVVVDLSXYRDP 700
+LP +WDV+VDL YRDP
Sbjct: 193 ILP-GHKWDVMVDLFFYRDP 211
>02_04_0452 + 23044190-23045227
Length = 345
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3
Query: 668 HPSXGHGEAHPXSLSTSRANNHHIKP 591
H GHG AH S S SRA+N +P
Sbjct: 173 HAGHGHGHAHSHSHSHSRAHNPSTRP 198
>11_06_0458 + 23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -3
Query: 167 TFSAPRWVVAASILVTSSSLRASTSNP 87
TF A RWV+AA V + L AS S+P
Sbjct: 2100 TFHAHRWVLAARSPVLKAKLSASPSSP 2126
>09_06_0103 + 20873310-20873382,20873530-20873735
Length = 92
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +3
Query: 345 VCRAHRCYAYC---GTFHTRCFY*PDPSCIP*TSSLDCI 452
+CR+ RC YC G RC + DPS ++ +C+
Sbjct: 45 LCRSTRCNQYCVSEGATRGRCGFSSDPSATALKNATECL 83
>06_03_0979 + 26502221-26502493
Length = 90
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -2
Query: 648 GSTPXKPQHFTCQQPPHQTNRVGRLGV 568
G TP +P QQPPH T G LG+
Sbjct: 7 GGTPVEPCGRLSQQPPHHTAYPGDLGL 33
>08_01_0152 -
1190358-1190462,1190648-1190765,1191134-1192691,
1193338-1193530
Length = 657
Score = 28.3 bits (60), Expect = 7.8
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = -1
Query: 349 QTSVQHADRRAVMR*RTHQRGSRWLRQHEQPEQVFPRYDAS*SHGYHQHVVC 194
+ SV + D+ ++ RT RGS L QPE + PRY+ H VC
Sbjct: 269 KNSVNNDDKPMLVSIRTKGRGSSTLPSIAQPEPL-PRYNKHWRRKAHSMCVC 319
>02_05_0924 -
32749682-32750200,32750756-32750959,32751062-32751109,
32751769-32751819,32751907-32752032,32752117-32752257,
32752750-32752971,32753160-32753312,32753536-32753718,
32753964-32754110,32754212-32754319,32754426-32754530,
32754824-32754928,32755243-32755310,32755498-32755576,
32755876-32755935,32756023-32756076,32756168-32756233,
32756701-32756753,32757042-32757096,32757645-32757787,
32758236-32758333,32758436-32758716
Length = 1022
Score = 28.3 bits (60), Expect = 7.8
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 662 SXGHGEAHPXSLSTSRANNHHIKPIEWEDLVLHGIAMSTNLSGESVLHKAITGMLTYEA 486
S GHGE SL K I+ DL+ + + LSGE LH ++ LT EA
Sbjct: 642 SIGHGEFATDSLHGEETPLASRKTIDHVDLLREQLKI---LSGEVALHTSVLKRLTEEA 697
>01_06_0902 +
32853708-32853739,32854787-32855596,32856094-32856157,
32856375-32856446
Length = 325
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +3
Query: 174 PDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSH 281
P +C+ T C C K CS CSC + H
Sbjct: 265 PQNSVCMVTLCTSEICSGRRYAAKKLCSACSCHKRH 300
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/78 (28%), Positives = 27/78 (34%)
Frame = +3
Query: 120 CHQNACCNHPSWGRKC*LPDGDLCLQTTC*WYPCDQLASYLGKTCSGCSCCRSHREPR*C 299
CH C P GR+ P G + CD A+ G TC C H+ P C
Sbjct: 324 CHAGKCGGCPLQGRRT-CPCGKKDYPSL----DCDAEAATCGSTCEKVLGCGRHKCPERC 378
Query: 300 VRHLITALRSACCTEVCR 353
R T+ CR
Sbjct: 379 HRGSCVETCRLVITKSCR 396
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,046,094
Number of Sequences: 37544
Number of extensions: 518299
Number of successful extensions: 1290
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1290
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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