Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F14
(724 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 37 0.017
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 37 0.017
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.022
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.022
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.022
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.089
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.089
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.089
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 34 0.12
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 33 0.16
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 33 0.16
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 33 0.16
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.16
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.21
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.27
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 33 0.27
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 32 0.48
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 31 1.1
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 31 1.1
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 31 1.1
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 31 1.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 25 1.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 25 1.4
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 1.9
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 1.9
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 30 1.9
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 30 1.9
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 30 1.9
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 30 1.9
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 29 2.5
U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific... 29 2.5
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.4
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 3.4
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 29 3.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 3.4
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 29 3.4
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 29 3.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 26 4.1
U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction... 29 4.4
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 29 4.4
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 29 4.4
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 29 4.4
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 4.4
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 4.4
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 29 4.4
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 5.9
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 28 5.9
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 5.9
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 28 5.9
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 5.9
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 28 5.9
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 5.9
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 7.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 28 7.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 28 7.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 28 7.8
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 28 7.8
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPPPG G P P +PPPP
Sbjct: 288 PPPPSSGMWPPPPPPPPG---RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 337
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP + PPPPP G P P +PPPP
Sbjct: 336 PPPPGMRYPGGMPPPPP---PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXXAPP 461
P PP P PPPPP G ++ P P PPPP + PP
Sbjct: 276 PMPPTPGMTPR-PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP------PPPPPSRFGPP 328
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPP----PPG-GGXXXXXXGGAXXK-SXXPXXXXXXPXXFXXL 428
P G P PP P PPP PPG GG G P P +
Sbjct: 303 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 362
Query: 429 --PPPPXAXXAPP 461
PPPP APP
Sbjct: 363 YPPPPPSRPPAPP 375
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.017
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPPPG G P P +PPPP
Sbjct: 298 PPPPSSGMWPPPPPPPPG---RTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPP 347
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP + PPPPP G P P +PPPP
Sbjct: 346 PPPPGMRYPGGMPPPPP---PRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/60 (30%), Positives = 21/60 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXXAPP 461
P PP P PPPPP G ++ P P PPPP + PP
Sbjct: 286 PMPPTPGMTPR-PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP------PPPPPSRFGPP 338
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/73 (32%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPP----PPG-GGXXXXXXGGAXXK-SXXPXXXXXXPXXFXXL 428
P G P PP P PPP PPG GG G P P +
Sbjct: 313 PPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGM 372
Query: 429 --PPPPXAXXAPP 461
PPPP APP
Sbjct: 373 YPPPPPSRPPAPP 385
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXX 452
G PPPP PPPPP G GG P P PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 453 APP 461
PP
Sbjct: 768 CPP 770
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGG 341
G PPPP P PPPPP GG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXX--PPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXA 446
G PPPP P PPPPP G GG P P PPPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-----PPPPGG 779
Query: 447 XXAPP 461
P
Sbjct: 780 FKGGP 784
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 267 PXGXGP---PPPXXXFXPXXPPPPPGG 338
P GP PPP P PPPPPGG
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +1
Query: 319 PPPPXGGXXXXXGXGXXXXKVXPXXXXAXXHXXXFXSPPPPXXXXRXXVLXXXXXPEGXG 498
PPPP GG G P PPPP P G
Sbjct: 728 PPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 499 GGPPXXPPXXSF 534
GGPP PP F
Sbjct: 782 GGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGG 338
PPPP F PPPPP G
Sbjct: 773 PPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPG 335
P PPPP PPPPPG
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXX 452
G PPPP PPPPP G GG P P PPPP
Sbjct: 711 GGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPPPGG 767
Query: 453 APP 461
PP
Sbjct: 768 CPP 770
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGG 341
G PPPP P PPPPP GG
Sbjct: 757 GPPPPPPPPGGCPPPPPPPPPGG 779
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXX--PPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXA 446
G PPPP P PPPPP G GG P P PPPP
Sbjct: 725 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-----PPPPGG 779
Query: 447 XXAPP 461
P
Sbjct: 780 FKGGP 784
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 267 PXGXGP---PPPXXXFXPXXPPPPPGG 338
P GP PPP P PPPPPGG
Sbjct: 753 PISGGPPPPPPPPGGCPPPPPPPPPGG 779
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +1
Query: 319 PPPPXGGXXXXXGXGXXXXKVXPXXXXAXXHXXXFXSPPPPXXXXRXXVLXXXXXPEGXG 498
PPPP GG G P PPPP P G
Sbjct: 728 PPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 781
Query: 499 GGPPXXPPXXSF 534
GGPP PP F
Sbjct: 782 GGPPPPPPPGMF 793
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGG 338
PPPP F PPPPP G
Sbjct: 773 PPPPPGGFKGGPPPPPPPG 791
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPG 335
P PPPP PPPPPG
Sbjct: 769 PPPPPPPPPGGFKGGPPPPPPPG 791
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/63 (33%), Positives = 21/63 (33%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXX 452
G PPPP PPPPP G GG P P PPPP
Sbjct: 294 GGPPPPPGLPPITGGPPPPPPPGGLPPITGG---PPPPPPPGGLPPISGGPPPPPPPPGG 350
Query: 453 APP 461
PP
Sbjct: 351 CPP 353
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGG 341
G PPPP P PPPPP GG
Sbjct: 340 GPPPPPPPPGGCPPPPPPPPPGG 362
Score = 33.5 bits (73), Expect = 0.16
Identities = 21/65 (32%), Positives = 21/65 (32%), Gaps = 2/65 (3%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXX--PPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXA 446
G PPPP P PPPPP G GG P P PPPP
Sbjct: 308 GPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-----PPPPGG 362
Query: 447 XXAPP 461
P
Sbjct: 363 FKGGP 367
Score = 32.3 bits (70), Expect = 0.36
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 3/27 (11%)
Frame = +3
Query: 267 PXGXGP---PPPXXXFXPXXPPPPPGG 338
P GP PPP P PPPPPGG
Sbjct: 336 PISGGPPPPPPPPGGCPPPPPPPPPGG 362
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/72 (29%), Positives = 21/72 (29%)
Frame = +1
Query: 319 PPPPXGGXXXXXGXGXXXXKVXPXXXXAXXHXXXFXSPPPPXXXXRXXVLXXXXXPEGXG 498
PPPP GG G P PPPP P G
Sbjct: 311 PPPPPGGLPPITGGPP------PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFK 364
Query: 499 GGPPXXPPXXSF 534
GGPP PP F
Sbjct: 365 GGPPPPPPPGMF 376
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGG 338
PPPP F PPPPP G
Sbjct: 356 PPPPPGGFKGGPPPPPPPG 374
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPG 335
P PPPP PPPPPG
Sbjct: 352 PPPPPPPPPGGFKGGPPPPPPPG 374
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.089
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXP----PPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPP 434
P PPPP P P PPPP GG G S P LPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPP 314
Query: 435 PPXAXXAPP 461
P PP
Sbjct: 315 PQAGGSPPP 323
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP 431
K++ P G PPPP P PP G G A P P P
Sbjct: 228 KRQAPPAGSPPPPPP----PKGSPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPP 281
Query: 432 PPPXAXXAPP 461
PPP PP
Sbjct: 282 PPPAGGSPPP 291
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.089
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXP----PPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPP 434
P PPPP P P PPPP GG G S P LPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPP 335
Query: 435 PPXAXXAPP 461
P PP
Sbjct: 336 PQAGGSPPP 344
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP 431
K++ P G PPPP P PP G G A P P P
Sbjct: 249 KRQAPPAGSPPPPPP----PKGSPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPP 302
Query: 432 PPPXAXXAPP 461
PPP PP
Sbjct: 303 PPPAGGSPPP 312
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.089
Identities = 22/69 (31%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXP----PPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPP 434
P PPPP P P PPPP GG G S P LPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG----SPPPPPPPRGSPPTGSLPP 320
Query: 435 PPXAXXAPP 461
P PP
Sbjct: 321 PQAGGSPPP 329
Score = 31.5 bits (68), Expect = 0.63
Identities = 21/70 (30%), Positives = 23/70 (32%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP 431
K++ P G PPPP P PP G G A P P P
Sbjct: 234 KRQAPPAGSPPPPPP----PKGSPPLAGSGSPPPPP--AAGSPPPPRTGSPPPPPTGSPP 287
Query: 432 PPPXAXXAPP 461
PPP PP
Sbjct: 288 PPPAGGSPPP 297
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 33.9 bits (74), Expect = 0.12
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGG 338
P G GPPPP + PPPP G
Sbjct: 90 PHGLGPPPPPPHYYTQPPPPPQSG 113
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP--PPP 440
P G GPPP P PPPP G GA + P P F P PPP
Sbjct: 84 PPGMGPPPFMPP--PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 141
Query: 441 XAXXAPP 461
+ A P
Sbjct: 142 TSSAAAP 148
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP--PPP 440
P G GPPP P PPPP G GA + P P F P PPP
Sbjct: 107 PPGMGPPPFMPP--PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 164
Query: 441 XAXXAPP 461
+ A P
Sbjct: 165 TSSAAAP 171
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/67 (34%), Positives = 25/67 (37%), Gaps = 2/67 (2%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLP--PPP 440
P G GPPP P PPPP G GA + P P F P PPP
Sbjct: 357 PPGMGPPPFMPP--PIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPP 414
Query: 441 XAXXAPP 461
+ A P
Sbjct: 415 TSSAAAP 421
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 33.5 bits (73), Expect = 0.16
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGG 338
PPPP P PPPPPGG
Sbjct: 580 PPPPPMLGGPPPPPPPPGG 598
Score = 30.3 bits (65), Expect = 1.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGG 341
PPPP PPPPP GG
Sbjct: 579 PPPPPPMLGGPPPPPPPPGG 598
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPG 335
P PPPP P PPPP G
Sbjct: 576 PPPPPPPPPMLGGPPPPPPPPGG 598
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
GG GGGG G G PP GGGGG G GGGG
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGG 139
Score = 32.7 bits (71), Expect = 0.27
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPPXXGRXGGGG 587
GGGG G GGG P PPP G GGGG
Sbjct: 24 GGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 69
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPPXX-GRXGGGG 587
GGGG G GGG P PPPP G GGGG
Sbjct: 80 GGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
GG GGGG G PP GGGGG G GGGG
Sbjct: 81 GGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGG 140
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -1
Query: 457 GAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
G GGG G G APP PPP GGG G GGGG
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPP-----PPPACGGGCGGGGGGCGGGG 76
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.27
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 1/65 (1%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXL-PPPPX 443
P G GPPPP P PP GG G P P F + PPP
Sbjct: 406 PGGYGPPPPGGPGAPGSYGPPQGG-----PGGFGPPPPGGPGAYGPPPTGFPPVGAPPPG 460
Query: 444 AXXAP 458
A AP
Sbjct: 461 AAGAP 465
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/46 (39%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = -1
Query: 721 GGGXXXGTGGGXRPAXXX*XXTAX-PXXXXXPXPPPPXXGRXGGGG 587
GGG G GGG P + P P PPPP G G GG
Sbjct: 33 GGGCGGGGGGGCLPTLGCSVISFNVPTLKLPPPPPPPCGGGCGCGG 78
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 31.9 bits (69), Expect = 0.48
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPP 437
GPPPP P PPP G GG + P P +P P
Sbjct: 1467 GPPPPRGMNSPMRGMPPPMRGGGPPMRGGPPMRGGPPMFRGGPPGPGRGMPSP 1519
Score = 31.5 bits (68), Expect = 0.63
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
P PPPP P PPPPP G P P PPPP
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTG--VPLPVPPPPPLFSPSMILPPPPPP 1395
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGG 338
P G PPP P PPPP GG
Sbjct: 1586 PPLMGGPPPRLGMPPPGPPPPNGG 1609
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGG 338
P G PPP F PPPPP G
Sbjct: 99 PMMGGIPPPPPMFGAPPPPPPPSG 122
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/69 (30%), Positives = 22/69 (31%), Gaps = 4/69 (5%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXP----PPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPP 434
P G P P P P PPPPG G G P +PP
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPG------GIPPPPPMFAGGIPPPPPMMGGIPP 106
Query: 435 PPXAXXAPP 461
PP APP
Sbjct: 107 PPPMFGAPP 115
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGG 341
G PPPP P PPPP G G
Sbjct: 102 GGIPPPPPMFGAPPPPPPPSGLG 124
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPP--PPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
P PP P P PP PPP GG GA P P PPPP
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP--PPPPPPP 255
Query: 441 XA 446
A
Sbjct: 256 PA 257
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 261 KXPXGXGPPPPXXXFXPXXPPPPP 332
K P PPPP P PPPPP
Sbjct: 2272 KSPNLIPPPPPGYMHTPPLPPPPP 2295
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPP--PPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
P PP P P PP PPP GG GA P P PPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP--PPPPPPP 241
Query: 441 XA 446
A
Sbjct: 242 PA 243
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/62 (33%), Positives = 21/62 (33%), Gaps = 2/62 (3%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPP--PPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
P PP P P PP PPP GG GA P P PPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPP--PPPPPPP 241
Query: 441 XA 446
A
Sbjct: 242 PA 243
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPP 329
PPPP P PPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 285 PPPXXXFXPXXPPPPP 332
PPP P PPPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 429 PPPPXAXXAPPCS 467
PPPP A APP S
Sbjct: 13 PPPPPAASAPPPS 25
Score = 22.2 bits (45), Expect(2) = 3.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 429 PPPPXAXXAPPCS 467
PPPP A PP S
Sbjct: 14 PPPPAASAPPPSS 26
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPP 329
PPPP P PPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 25.4 bits (53), Expect(2) = 3.2
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 285 PPPXXXFXPXXPPPPP 332
PPP P PPPPP
Sbjct: 2 PPPPPPPPPPPPPPPP 17
Score = 23.4 bits (48), Expect(2) = 1.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +3
Query: 429 PPPPXAXXAPPCS 467
PPPP A APP S
Sbjct: 13 PPPPPAASAPPPS 25
Score = 22.2 bits (45), Expect(2) = 3.2
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +3
Query: 429 PPPPXAXXAPPCS 467
PPPP A PP S
Sbjct: 14 PPPPAASAPPPSS 26
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPGGG 341
G GP P P PPPPP GG
Sbjct: 27 GLGPQRPQQCCCPPPPPPPPCGG 49
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPPXAXXAPP 461
PPPP P PPPP G P PPPP A P
Sbjct: 707 PPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGP 766
Query: 462 CS 467
S
Sbjct: 767 MS 768
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +3
Query: 267 PXGXGPPP----PXXXFXPXXPPPP 329
P G GPPP P F P PPPP
Sbjct: 721 PPGVGPPPPQGIPPMGFDPNKPPPP 745
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPG----GGGGXXGXKXXX 293
GG GGGG G APP PPP GG +
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG 329
Query: 292 GGGG 281
GGGG
Sbjct: 330 GGGG 333
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPP 614
GGGG G+ GG + +A P PPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPPXXGRXGGG 590
GGGG G G A P P PP P GGG
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/64 (29%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPG----GGGGXXGXKXXX 293
GG GGGG G APP PPP GG +
Sbjct: 270 GGYAGGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGGYSEQSSG 329
Query: 292 GGGG 281
GGGG
Sbjct: 330 GGGG 333
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPP 614
GGGG G+ GG + +A P PPPP
Sbjct: 274 GGGGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPP 310
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 724 GGGGXXXGTGGGXRPAXXX*XXTAXPXXXXXPXPPPPXXGRXGGG 590
GGGG G G A P P PP P GGG
Sbjct: 278 GGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +3
Query: 588 PPPPXRPXX--GGGGXGXXXXXGXAVXSHXXXAGLXPPPVP 704
PPPP P GGGG ++ S G PPP P
Sbjct: 32 PPPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAP 72
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 255 KKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ P PPPP P PPPPP
Sbjct: 141 REDIPAPPRPPPPVELSPPPRPPPPP 166
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 255 KKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ P PPPP P PPPPP
Sbjct: 782 REDIPAPPRPPPPVELSPPPRPPPPP 807
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 255 KKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ P PPPP P PPPPP
Sbjct: 782 REDIPAPPRPPPPVELSPPPRPPPPP 807
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 29.9 bits (64), Expect = 1.9
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 255 KKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ P PPPP P PPPPP
Sbjct: 782 REDIPAPPRPPPPVELSPPPRPPPPP 807
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
G A GGGG G G P GGGGG G K GGGG
Sbjct: 286 GSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGG--GAKSGGGGGG 343
>U40802-12|AAK19014.2| 265|Caenorhabditis elegans Sperm-specific
family, class qprotein 3 protein.
Length = 265
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
G A GGGG G G P GGGGG G K GGGG
Sbjct: 180 GSAMGGGGGGGATSAYFGVGSGAMGGGGAGAQSAYFGVGGGPVGGGGG--GAKSGGGGGG 237
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGG 341
P P PP P PPPPP GG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPGGG 341
P P PP P PPPPP GG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPGG 818
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPP 332
PPPP P PPPPP
Sbjct: 42 PPPPMCGCAPPPPPPPP 58
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 340 PPPGGGGGXXGXKXXXGGGGPXPXG 266
P GGGGG G GGG P G
Sbjct: 7 PSSGGGGGGGGASGGAGGGAPGGGG 31
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 2/67 (2%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPP--PGGGGGXXGXKXXXGG 287
GG GGGG G G A P P P GGG G GG
Sbjct: 358 GGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGGGGAGG 417
Query: 286 GGPXPXG 266
GG G
Sbjct: 418 GGGYAGG 424
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 436 GGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGGP 278
GGG G + AP PPP GG G GG GP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGP 88
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -1
Query: 436 GGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGGP 278
GGG G + AP PPP GG G GG GP
Sbjct: 36 GGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPGP 88
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 25.8 bits (54), Expect(2) = 4.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPP 332
PPPP PPPPP
Sbjct: 253 PPPPPCPMPIPCPPPPP 269
Score = 21.4 bits (43), Expect(2) = 4.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +3
Query: 429 PPPPXAXXAPP 461
PPPP A PP
Sbjct: 265 PPPPPACSCPP 275
>U39650-4|AAK39186.1| 944|Caenorhabditis elegans Apical junction
molecule protein1, isoform b protein.
Length = 944
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ + P PPP P PPPPP
Sbjct: 6 ERPRSPLDLPPPPASVVLHPSAPPPPP 32
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ + P PPP P PPPPP
Sbjct: 6 ERPRSPLDLPPPPASVVLHPSAPPPPP 32
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ + P PPP P PPPPP
Sbjct: 6 ERPRSPLDLPPPPASVVLHPSAPPPPP 32
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +3
Query: 252 KKKKXPXGXGPPPPXXXFXPXXPPPPP 332
++ + P PPP P PPPPP
Sbjct: 6 ERPRSPLDLPPPPASVVLHPSAPPPPP 32
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPP 332
PPPP P PPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 28.7 bits (61), Expect = 4.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPP 332
PPPP P PPPPP
Sbjct: 298 PPPPIKEESPPPPPPPP 314
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXX---PPPPPGG 338
G GPPPP F P PPPPP G
Sbjct: 46 GFGPPPPP--FGPVGYALPPPPPNG 68
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPG 335
G PPPP P PPPPPG
Sbjct: 787 GGIPPPPPLGIIP--PPPPPG 805
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3
Query: 267 PXGXGPPPPXXXFXPXXPPPPPG 335
P G PPPP + PPPPPG
Sbjct: 137 PAGMYPPPPTGQY----PPPPPG 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.9
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPP 332
PPPP P PPPPP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = -1
Query: 460 GGAXXAXGGGGXKXXXXGXXXXXXGXXLFXXAPPXXXXXXPPPGGGGGXXGXKXXXGGGG 281
GG GG G G G PP G GGG G GGGG
Sbjct: 116 GGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGGGGRGGGG 175
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 258 KKXPXGXGPPPPXXXFXPXXPPPPP 332
K P PPPP PPPPP
Sbjct: 64 KATPPPPPPPPPLISILQQAPPPPP 88
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPP G G A + P P PPPP
Sbjct: 34 PPPPKGTGTP--PPPPTGEPQDLSGEGNASRRPPPPPKGTGTP------PPPP 78
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPP G G A + P P PPPP
Sbjct: 97 PPPPKGTGTP--PPPPTGEPQDLSGEGNASRRPPPPPKGTGSP------PPPP 141
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPP G G A + P P PPPP
Sbjct: 128 PPPPKGTGSP--PPPPTGEPQDLSGEGNASRRPPPPPKGTGSP------PPPP 172
Score = 28.3 bits (60), Expect = 5.9
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 282 PPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
PPPP P PPPP G G A + P P PPPP
Sbjct: 159 PPPPKGTGSP--PPPPTGEPQDLSTEGNASRRPPPPPKGTGTP------PPPP 203
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPG 335
G PPPP P PPPPPG
Sbjct: 787 GGIPPPPPLGIIP--PPPPPG 805
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPP 332
GPPPP P PPPP
Sbjct: 93 GPPPPRNNCLPPPGPPPP 110
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPP 332
GPPPP P PPPP
Sbjct: 93 GPPPPRNNCLPPPGPPPP 110
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPP 332
GPPPP P PPPP
Sbjct: 93 GPPPPRNNCLPPPGPPPP 110
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
G P P PPPPP A P P PPPP
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 279 GPPPPXXXFXPXXPPPPPGGGXXXXXXGGAXXKSXXPXXXXXXPXXFXXLPPPP 440
G P P PPPPP A P P PPPP
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 334 PGGGGGXXGXKXXXGGGGP 278
PGGGGG GGGGP
Sbjct: 621 PGGGGGPPRGPGGGGGGGP 639
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPG 335
G GPPPP PPPPG
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPG 697
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 273 GXGPPPPXXXFXPXXPPPPPG 335
G GPPPP PPPPG
Sbjct: 677 GQGPPPPPQGQQYYGGPPPPG 697
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -1
Query: 334 PGGGGGXXGXKXXXGGGGP 278
PGGGGG GGGGP
Sbjct: 621 PGGGGGPPRGPGGGGGGGP 639
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,474,197
Number of Sequences: 27780
Number of extensions: 268733
Number of successful extensions: 2838
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2224
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1697838058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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