Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_F11
         (896 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001609-1|AAN71364.1|  319|Drosophila melanogaster RE31802p pro...    29   8.6  
AY061432-1|AAL28980.1|  315|Drosophila melanogaster LD36125p pro...    29   8.6  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   8.6  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   8.6  
AE014134-1616|AAN10690.1|  319|Drosophila melanogaster CG4454-PB...    29   8.6  
AE014134-1615|AAF52757.1|  315|Drosophila melanogaster CG4454-PA...    29   8.6  

>BT001609-1|AAN71364.1|  319|Drosophila melanogaster RE31802p
           protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 532 KPPSPTISATSTRSSNPRFHTPTTPDLTSIFINPLNAVLKXXXXXXXXXXXXXXAPSAYL 711
           KPPS + S++S+R+S  +  TP      +   +     LK              A   Y 
Sbjct: 179 KPPSISSSSSSSRNSRSKLRTPMASRAKAFSAD--RTPLKQKQMRSGSPTTPPMAFLRYP 236

Query: 712 TPSSLGMAKXGSPPYFQV 765
            P  + ++K GSP   QV
Sbjct: 237 KPGEVALSKYGSPMVAQV 254


>AY061432-1|AAL28980.1|  315|Drosophila melanogaster LD36125p
           protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 532 KPPSPTISATSTRSSNPRFHTPTTPDLTSIFINPLNAVLKXXXXXXXXXXXXXXAPSAYL 711
           KPPS + S++S+R+S  +  TP      +   +     LK              A   Y 
Sbjct: 175 KPPSISSSSSSSRNSRSKLRTPMASRAKAFSAD--RTPLKQKQMRSGSPTTPPMAFLRYP 232

Query: 712 TPSSLGMAKXGSPPYFQV 765
            P  + ++K GSP   QV
Sbjct: 233 KPGEVALSKYGSPMVAQV 250


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 233  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 358
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +2

Query: 233  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 358
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014134-1616|AAN10690.1|  319|Drosophila melanogaster CG4454-PB,
           isoform B protein.
          Length = 319

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 532 KPPSPTISATSTRSSNPRFHTPTTPDLTSIFINPLNAVLKXXXXXXXXXXXXXXAPSAYL 711
           KPPS + S++S+R+S  +  TP      +   +     LK              A   Y 
Sbjct: 179 KPPSISSSSSSSRNSRSKLRTPMASRAKAFSAD--RTPLKQKQMRSGSPTTPPMAFLRYP 236

Query: 712 TPSSLGMAKXGSPPYFQV 765
            P  + ++K GSP   QV
Sbjct: 237 KPGEVALSKYGSPMVAQV 254


>AE014134-1615|AAF52757.1|  315|Drosophila melanogaster CG4454-PA,
           isoform A protein.
          Length = 315

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/78 (26%), Positives = 32/78 (41%)
 Frame = +1

Query: 532 KPPSPTISATSTRSSNPRFHTPTTPDLTSIFINPLNAVLKXXXXXXXXXXXXXXAPSAYL 711
           KPPS + S++S+R+S  +  TP      +   +     LK              A   Y 
Sbjct: 175 KPPSISSSSSSSRNSRSKLRTPMASRAKAFSAD--RTPLKQKQMRSGSPTTPPMAFLRYP 232

Query: 712 TPSSLGMAKXGSPPYFQV 765
            P  + ++K GSP   QV
Sbjct: 233 KPGEVALSKYGSPMVAQV 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,243,416
Number of Sequences: 53049
Number of extensions: 777758
Number of successful extensions: 2434
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2432
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4362070239
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)