Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F09
(837 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 38 0.002
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 36 0.005
SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 36 0.007
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 36 0.007
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 35 0.012
SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase |S... 34 0.029
SPBC1718.06 |msp1|mgm1|mitochondrial GTPase Msp1|Schizosaccharom... 33 0.038
SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor eIF... 33 0.050
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 33 0.066
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 33 0.066
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 33 0.066
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 33 0.066
SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces pombe... 32 0.088
SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces p... 32 0.088
SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyce... 32 0.12
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 32 0.12
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 31 0.15
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.15
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 30 0.47
SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protei... 30 0.47
SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces po... 29 0.62
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 29 0.62
SPCC1827.02c |||cholinephosphate cytidylyltransferase |Schizosac... 29 0.62
SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual 29 0.82
SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharom... 29 0.82
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 29 0.82
SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans isomera... 28 1.4
SPBC14F5.08 |med7||mediator complex subunit Med7|Schizosaccharom... 28 1.4
SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subun... 28 1.4
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 28 1.4
SPAC23C4.19 |spt5||transcription elongation factor Spt5|Schizosa... 28 1.4
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 28 1.9
SPBC11C11.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 28 1.9
SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomy... 28 1.9
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 28 1.9
SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein lig... 27 2.5
SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr 1|||... 27 2.5
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 27 3.3
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 27 3.3
SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces ... 27 3.3
SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr 2|... 27 4.4
SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit Dpb3|Schizosa... 27 4.4
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 27 4.4
SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15 |Schi... 26 5.8
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 26 5.8
SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces pom... 26 5.8
SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subun... 26 5.8
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 7.6
SPAC926.04c |hsp90|swo1|heat shock protein Hsp90|Schizosaccharom... 26 7.6
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 26 7.6
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 26 7.6
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 37.5 bits (83), Expect = 0.002
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +2
Query: 227 YSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAK 379
Y P EE + IK E + +E ++ NE DE++ + +++E +D K
Sbjct: 348 YDPDYEENEKKYDAIKHEILGEEDDDENEEDEEDSEETSESEEDESVNDEK 398
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 DTQESTGPDDAKKHTAETMEHDGDETEDKKQKNE--ESKEDKA 466
D +E+ DA KH E D + ED++ E ES+ED++
Sbjct: 351 DYEENEKKYDAIKHEILGEEDDDENEEDEEDSEETSESEEDES 393
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 36.3 bits (80), Expect = 0.005
Identities = 16/81 (19%), Positives = 36/81 (44%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHT 388
SD + S + S+ S + E +K+ ++ + S + EDD + D+ +S ++
Sbjct: 241 SDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSD 300
Query: 389 AETMEHDGDETEDKKQKNEES 451
+ + D D + + N +
Sbjct: 301 STSSSSDSDSSSSSEDGNSNT 321
>SPBC4F6.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 674
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/76 (23%), Positives = 35/76 (46%)
Frame = +2
Query: 236 SLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGD 415
S EEE+ E + + E + + E+E D + +E G + + + +E GD
Sbjct: 198 SSEEENKEFVSDEGHSIVTEDASADSESEEEVDGHSEGKELAGESEEEGSNVDDVEDSGD 257
Query: 416 ETEDKKQKNEESKEDK 463
+ DK N E ++++
Sbjct: 258 SSSDKNSINHEIRDNE 273
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 35.9 bits (79), Expect = 0.007
Identities = 23/82 (28%), Positives = 42/82 (51%)
Frame = +2
Query: 218 DDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAET 397
DD SL+EE +ES K ++ K+ ++++ E DD +++ E KK ++
Sbjct: 131 DDMDDLSLDEEESESSE-KSKKKKKKSKSKDDGSEALDDGDIESSEKD-----KKKKKKS 184
Query: 398 MEHDGDETEDKKQKNEESKEDK 463
E+D +D+K + +E K K
Sbjct: 185 KENDDAPKKDRKTRKKEEKARK 206
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 35.1 bits (77), Expect = 0.012
Identities = 20/78 (25%), Positives = 35/78 (44%)
Frame = +2
Query: 212 DGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTA 391
D D+ LE+ Q ++ + +E ++ +ESDE ED+ DDAKK
Sbjct: 217 DEDEEEISDLEDWLGSDQSMETSESEEEESSESESDEDEDEDNKGKIRKRKTDDAKKSRK 276
Query: 392 ETMEHDGDETEDKKQKNE 445
+ H E E +++ +
Sbjct: 277 KRAPHIHIEYEQERENEK 294
>SPAC27F1.06c |||FKBP-type peptidyl-prolyl cis-trans isomerase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 362
Score = 33.9 bits (74), Expect = 0.029
Identities = 21/78 (26%), Positives = 37/78 (47%)
Frame = +2
Query: 212 DGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTA 391
+ D+ + EEE E KDE K ++ + +E+E A+D +S + KK
Sbjct: 176 NSDEEDAEQAEEEILEKPVPKDEVAEKHSKDKLKKEEKEKKTAVDVSDSV---NGKKRKT 232
Query: 392 ETMEHDGDETEDKKQKNE 445
E +G++TE K + +
Sbjct: 233 EP-AGEGEQTEKKSKSTK 249
>SPBC1718.06 |msp1|mgm1|mitochondrial GTPase
Msp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 903
Score = 33.5 bits (73), Expect = 0.038
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 5/80 (6%)
Frame = +2
Query: 239 LEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQEST-GPDDAKKHTAETMEH-DG 412
L+EES E + + + AKE + + ++ D D ++T G A + +++ DG
Sbjct: 157 LDEESAERRRVLQAERAKEHRSNSNDKQKSSDNDEDPNDTTVGIGAALAASILSVDSVDG 216
Query: 413 DET---EDKKQKNEESKEDK 463
++T ++K++ +ESKED+
Sbjct: 217 EDTLTADEKRKLAQESKEDR 236
>SPAC4A8.16c |tif33|SPAC823.01c|translation initiation factor
eIF3c|Schizosaccharomyces pombe|chr 1|||Manual
Length = 918
Score = 33.1 bits (72), Expect = 0.050
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Frame = +2
Query: 212 DGDDRYSPSLEEESTESQ---PIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDD-AK 379
D + S EEE TES+ + DE ++ + +E E + D E +GP K
Sbjct: 80 DSESDSESSEEEEETESEEDSEVSDESESESESESESEEESESEEESDESERSGPSSFLK 139
Query: 380 KHTAETMEHDGDETEDKKQKNEESKEDK 463
K E + G + + E S E++
Sbjct: 140 KPEKEEAKPAGLKFLRGESSEESSDEEE 167
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 32.7 bits (71), Expect = 0.066
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHT 388
SD +D + +E E+ KDE + + E++ ++D D DD K
Sbjct: 4103 SDLEDMDMEAADENKEEADAEKDEPMQDFEDPLEENNTLDEDIQQDDFSDLAEDDEK--- 4159
Query: 389 AETMEHDGDETEDKKQKNEESKED 460
M DG E+ Q+NEES ED
Sbjct: 4160 ---MNEDG--FEENVQENEESTED 4178
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 32.7 bits (71), Expect = 0.066
Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 242 EEESTESQPIKDEQVAKEPNNR-NESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDE 418
+E S+ES + + +E + E E D + ++ S ++ +E E ++
Sbjct: 134 KESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEK 193
Query: 419 TEDKKQKNEESKED 460
TE+KK+ + ES D
Sbjct: 194 TEEKKEGSSESSSD 207
Score = 32.3 bits (70), Expect = 0.088
Identities = 18/88 (20%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHT 388
S + S S E ES+ S+ ++ ++ + S E E++ + T+E +
Sbjct: 84 SSESESESSSSESESSSSESESSSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSS 143
Query: 389 AETMEHDGD--ETEDKKQKNEESKEDKA 466
+E+ E + + E+KK+ + +S + +
Sbjct: 144 SESEEEEEAVVKIEEKKESSSDSSSESS 171
Score = 32.3 bits (70), Expect = 0.088
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Frame = +2
Query: 203 TRSDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQE------DDRAMDTQESTG 364
+ S + S EEE K E + E ++ +ES+E+E +++ + +S+
Sbjct: 110 SESSSSESSSSESEEEVIVKTEEKKES-SSESSSSSESEEEEEAVVKIEEKKESSSDSSS 168
Query: 365 PDDAKKHTAETMEHDGDETEDKKQKNEESKE 457
+ + +E+ + +E E+ +K EE KE
Sbjct: 169 ESSSSESESESSSSESEEEEEVVEKTEEKKE 199
Score = 29.1 bits (62), Expect = 0.82
Identities = 16/76 (21%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
Frame = +2
Query: 233 PSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDG 412
PS + + + K E+ + E + + S E E + +++ S+ ++ + + E +
Sbjct: 66 PSKKSVKKQKKSKKKEESSSESESESSSSESESSSS-ESESSSSESESSSSESSSSESEE 124
Query: 413 D---ETEDKKQKNEES 451
+ +TE+KK+ + ES
Sbjct: 125 EVIVKTEEKKESSSES 140
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/93 (19%), Positives = 40/93 (43%), Gaps = 6/93 (6%)
Frame = +2
Query: 203 TRSDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESD--EQEDDRAMDTQE----STG 364
+ S+ ++ +EE+ S E + E + + S E+E++ T+E S+
Sbjct: 144 SESEEEEEAVVKIEEKKESSSDSSSESSSSESESESSSSESEEEEEVVEKTEEKKEGSSE 203
Query: 365 PDDAKKHTAETMEHDGDETEDKKQKNEESKEDK 463
+ ++++ GD ++E S ED+
Sbjct: 204 SSSDSESSSDSSSESGDSDSSSDSESESSSEDE 236
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 32.7 bits (71), Expect = 0.066
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTES-QPIKDE--QVAKEPNNRNESDEQEDDRAMDTQESTGPDDAK 379
SD DD S L ST S P K E A NR+ +DE+++D S DD +
Sbjct: 136 SDTDD--SVPLRAVSTVSLTPYKSELPSGASTTQNRSPNDEEDEDEDYKWWTSENIDDTQ 193
Query: 380 KHTAETMEHDG 412
K T T+EH+G
Sbjct: 194 KWT--TLEHNG 202
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 32.7 bits (71), Expect = 0.066
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQV-AKEPNNRNESDEQEDDRAMDTQESTGPDDAKKH 385
+D D++ E+ E K+ V AKE ++ D++E + +T + D+K
Sbjct: 469 NDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTDSKETADKVEQTDSKDT 528
Query: 386 TAETMEHDGDETEDKKQKNEESKEDK 463
+ + D E +K +K +SK+ K
Sbjct: 529 NEKPAKDDNKEANEKAEK-VDSKDVK 553
>SPCC1827.01c |||DUF1253 family protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 652
Score = 32.3 bits (70), Expect = 0.088
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = +2
Query: 206 RSDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKH 385
+ D ++ S +++++ + + + +V E N NE+DEQE + ES D+
Sbjct: 37 KKDDKEKSSKKVQKKNKVIESLNEMEVEMEDENENENDEQEAIQYYINVESQDADETLHQ 96
Query: 386 TAETMEHD 409
A+ D
Sbjct: 97 EAQDSSED 104
>SPBC14C8.17c |||SAGA complex subunit Spt8 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 526
Score = 32.3 bits (70), Expect = 0.088
Identities = 18/63 (28%), Positives = 32/63 (50%)
Frame = +2
Query: 275 DEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQKNEESK 454
D+ E N NE ++++ D A+D E +G +D + T E + ++TE +K E +
Sbjct: 31 DQDKNPEENVMNEKEDEDVD-AVD--EKSGEEDVEMDTMEDENENDEDTEQTSEKKETEE 87
Query: 455 EDK 463
K
Sbjct: 88 TPK 90
>SPCP1E11.11 |||Puf family RNA-binding protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 642
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/82 (20%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 221 DRYSPSLEEESTESQPIKDEQVAKEPNNRNES-DEQEDDRAMDTQESTGPDDAKKHTAET 397
D +SP ++ +T S + + +++ ++ S +E ED+ ES +D +
Sbjct: 33 DSFSPKKKKNTTSSGSSESDSMSQNDKKKDSSLNESEDEDFAGFGESASENDELESAESE 92
Query: 398 MEHDGDETEDKKQKNEESKEDK 463
E+D + + K E + K
Sbjct: 93 AENDEESSSQKSNSKESHAQRK 114
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 31.9 bits (69), Expect = 0.12
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +2
Query: 233 PSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDG 412
P +EE E + + E+ E +E +E+EDD D E G D ++ + E +
Sbjct: 172 PDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGD-GEGDG-DGEGENDGKGSEEEE 229
Query: 413 DETEDKKQKNEES 451
+E D +++ EES
Sbjct: 230 EEEIDIEEEEEES 242
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/60 (21%), Positives = 28/60 (46%)
Frame = +2
Query: 266 PIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQKNE 445
P D+ +P+ E +E+E D + + G D ++ + + DG+ D + +N+
Sbjct: 162 PDFDDAPPVQPDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGEND 221
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 31.5 bits (68), Expect = 0.15
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDT--QESTGPDDAKK 382
S D + + +++EE ++ K E V + P ++ +QE QE
Sbjct: 158 SQTDKKKTSTVQEEELQNAGKKLETVQENPQAYSKVTQQEPQAGQKAVPQEPQANQQETS 217
Query: 383 HTAETMEHDGDETEDKKQKNEESKED 460
E D ET+D KQK + ++++
Sbjct: 218 SNQEESSFDRQETQDDKQKPKTTQQE 243
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.5 bits (68), Expect = 0.15
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = +2
Query: 209 SDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKK 382
++ D+ +SP E +DE K+ N++ +EQE ++ +E P++AK+
Sbjct: 371 AESDEMHSPYSTHEPESEPEDQDEPSEKDDENKDVEEEQEQEQ---EEEQIDPEEAKR 425
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +2
Query: 257 ESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDG-DETEDKK 433
E Q + DEQ +E ++++ +ED +D +ES D+ + E E D E
Sbjct: 43 EGQSVLDEQEIEEALEEDDTNYEED--IIDDEESAQVDEEELEEEEEEEEDATPEPVVTS 100
Query: 434 QKNEESK 454
+KN SK
Sbjct: 101 KKNSRSK 107
>SPBC660.11 |tcg1|mug187|single-stranded telomeric binding protein
Tgc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 348
Score = 29.9 bits (64), Expect = 0.47
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Frame = +2
Query: 218 DDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQEST--GPDDAKKHTA 391
DDR + + QPIKD + +K N +E E +++ ES D+ + +TA
Sbjct: 115 DDREIVVQKARPVQEQPIKDRKKSKNKN----GEEPETSTSVENAESAKGSSDENEANTA 170
Query: 392 ETMEHDGDETEDKKQKNEESK 454
+ DKKQ + K
Sbjct: 171 TAPSSNEANGVDKKQNEIKGK 191
>SPAC29A4.04c |||pseudouridylate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 474
Score = 29.5 bits (63), Expect = 0.62
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%)
Frame = +2
Query: 353 ESTGPDDAKKH-TAETMEHDGDET---EDKKQKNEESKEDK 463
E G +D+KK + E+ E D DE E+K++K E KE K
Sbjct: 418 EVNGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKK 458
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/52 (21%), Positives = 27/52 (51%)
Frame = +2
Query: 308 NESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQKNEESKEDK 463
N ++ + +++++ E + AKK + E ++KK+K E+ ++ K
Sbjct: 420 NGVEDSKKRKSVESSEKDEDEAAKKEEKRRKKEAKKEKKEKKEKKEKKEKKK 471
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 29.5 bits (63), Expect = 0.62
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 22/106 (20%)
Frame = +2
Query: 206 RSDGDDRYSPSLEEESTESQPIKDEQVAKE----PNNRNESDEQEDDRAMDTQESTGPD- 370
R++ D +L E+ E + I+DE+ +E P ++ SD ++D D +ST PD
Sbjct: 1403 RNNDDSSNKINLSEKEKEKESIEDEEKNREGSMSPVAKHASDVEDDH---DVAKSTAPDF 1459
Query: 371 DAKKHTAE-----------------TMEHDGDETEDKKQKNEESKE 457
+ H E T E+D D +DK +++++E
Sbjct: 1460 ETSSHRPERSSEKKSPSPVFTSVKQTAENDADNEDDKTDMDDQTEE 1505
>SPCC1827.02c |||cholinephosphate cytidylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 354
Score = 29.5 bits (63), Expect = 0.62
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 233 PSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQES 358
PS +E++ E Q K EP + + DE+EDD+ +S
Sbjct: 13 PSEKEDNVERQTKKYNFEIDEPEEQEKKDEKEDDKEESPSKS 54
>SPBC83.09c |||GYF domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 408
Score = 29.1 bits (62), Expect = 0.82
Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 224 RYSPSLEEEST-ESQPIKDE-QVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAET 397
R P +EE ES+ +DE Q+ + +S++ D + D + + D+A+K
Sbjct: 31 RKRPRTKEEGYYESESEEDEDQILNKEKKEGQSEDMFSDTSEDEKRTLPNDEAQKRRDFI 90
Query: 398 MEHDGDETEDKKQKNEESKED 460
D + K +N+E D
Sbjct: 91 ENGDAERLAHKGLRNKEVLND 111
>SPCC1183.07 |||U3 snoRNP-associated protein Rrp5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1690
Score = 29.1 bits (62), Expect = 0.82
Identities = 13/53 (24%), Positives = 21/53 (39%)
Frame = +2
Query: 275 DEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKK 433
D ++ N + ED E DD + E +E GDE E+++
Sbjct: 1314 DSDISMSDNEEDVEMRSEDQSDTSESEVGSKDDVQSEEVENLESAGDEDEEEE 1366
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 29.1 bits (62), Expect = 0.82
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 296 PNNRNESDEQEDD-RAMDTQESTGPDDAKKHTAETMEHDG---DETEDKKQKNEESKEDK 463
PN +ESD+ + +M+ +E D K +A+ + +G + E+K+ + +++KEDK
Sbjct: 440 PNETSESDDDANSISSMENEEERTSDS--KSSAKQGKGNGRAKETPEEKRARKKKTKEDK 497
Query: 464 A 466
A
Sbjct: 498 A 498
>SPBC1347.02 |fkbp39||FKBP-type peptidyl-prolyl cis-trans
isomerase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 361
Score = 28.3 bits (60), Expect = 1.4
Identities = 19/81 (23%), Positives = 35/81 (43%)
Frame = +2
Query: 212 DGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTA 391
+ D+ Y S EE DE+ +E + + S +ED+ +D+ + KK T
Sbjct: 132 ESDEDYDLSPTEEDLVETVSGDEESEEESESEDNSASEEDE--LDSAPAKKAQVKKKRTK 189
Query: 392 ETMEHDGDETEDKKQKNEESK 454
+ E + + KK ++ K
Sbjct: 190 DESEQE-EAASPKKNNTKKQK 209
>SPBC14F5.08 |med7||mediator complex subunit
Med7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 376
Score = 28.3 bits (60), Expect = 1.4
Identities = 10/47 (21%), Positives = 28/47 (59%)
Frame = +2
Query: 218 DDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQES 358
DD+++ E+++ + +KD + EP+ + E ++ + +D+Q++
Sbjct: 146 DDQHTAMKEKDNESDKTMKDVEEKTEPSLKKEEEDIQMKEPLDSQDT 192
>SPAC13F5.02c |ptr6|taf7|transcription factor TFIID complex subunit
Taf7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/44 (29%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +2
Query: 338 AMDTQESTGPDDA--KKHTAETMEHDGDETEDKKQKNEESKEDK 463
+ DT+EST A ++ +E E + +E E++ + ++E++E+K
Sbjct: 291 SQDTRESTAEPRAAGEESASEEEEEEEEEEEEENEADDETRENK 334
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 28.3 bits (60), Expect = 1.4
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Frame = +2
Query: 203 TRSDGDDRYS--PSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDA 376
TRS D L E+ + D+ + N NE+D E+ E+ +D+
Sbjct: 55 TRSTDDPSVEIRSKLVSPDNEANLLSDQNITISNENNNENDTTEEAETSSGNEAADDEDS 114
Query: 377 KKHTAETMEHDGDETEDKKQKNEESKEDK 463
A++ E D + E KE K
Sbjct: 115 SS-DAQSSVPSFSEIHDGMSEEELDKERK 142
>SPAC23C4.19 |spt5||transcription elongation factor
Spt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 990
Score = 28.3 bits (60), Expect = 1.4
Identities = 16/78 (20%), Positives = 35/78 (44%)
Frame = +2
Query: 230 SPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHD 409
S L ++S ++ +E+ + ++ NES + D+ + + E +
Sbjct: 40 SDLLNDDSEAAKITTNEKQSSPVDSHNESPNDTTINKGEDGNENEVDNVNNNDKKEDEDN 99
Query: 410 GDETEDKKQKNEESKEDK 463
+E E++ NEE +ED+
Sbjct: 100 VEENEEEADANEEEEEDE 117
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +2
Query: 293 EPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQ 436
E +N N +D++ED+ ++ E DA + E E D ++ ED+ +
Sbjct: 84 EVDNVNNNDKKEDEDNVEENEEEA--DANEEEEEDEEDDEEDEEDEDE 129
Score = 27.1 bits (57), Expect = 3.3
Identities = 16/91 (17%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Frame = +2
Query: 203 TRSDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKK 382
T + G+D ++ + + ++ V + + ++E+E+D D ++ D++
Sbjct: 73 TINKGEDGNENEVDNVNNNDKKEDEDNVEENEEEADANEEEEEDEEDDEEDEEDEDESGG 132
Query: 383 HTAETMEHDGD----ETEDKKQKNEESKEDK 463
+ HD + E + ++EE ED+
Sbjct: 133 GRRKRARHDRRNQFLDIEAEVDEDEEELEDE 163
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase
Hrp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1388
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 218 DDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDD 373
+D Y S EEE E +V++EP + D D R ++ + + P +
Sbjct: 161 EDAYFESFEEEEEEEMYEYATEVSEEPEDTRAIDVVLDHRLIEGHDGSTPSE 212
>SPBC11C11.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 27.9 bits (59), Expect = 1.9
Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = +2
Query: 245 EESTESQPIKDEQVAKEPNNRNES----DEQEDDRAMDTQESTGPDDAKKHTAETMEHDG 412
E++ P +E +++EP +NE DE++ D + +E+ +AKK + + + +
Sbjct: 27 EKAAPQPPEVEEVLSEEPYQKNEKVVVLDEEDADAFLHPEEA----EAKKESEKPSDGEK 82
Query: 413 DETEDKKQKNEESKEDKA 466
+K +K +S KA
Sbjct: 83 KGKTEKLEKEAKSVYSKA 100
>SPAC3F10.17 |||ribosome biogenesis protein Ltv1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 386
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 218 DDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQE----STGPDDAKKH 385
DDR+ +EEE T PIKDE+ +P+ ++ D D++ D + S GP +K
Sbjct: 302 DDRFD-KVEEEYT---PIKDERELIDPDQKDVFDLVNDNQFNDIMDEFLVSYGPTLGRKK 357
Query: 386 TAETMEH 406
M +
Sbjct: 358 APSRMSN 364
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 27.9 bits (59), Expect = 1.9
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +2
Query: 242 EEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDET 421
E + ES P D++ K+ ++ ++ + ++ T+E A K + E G+E
Sbjct: 79 ESHTNESLPSTDKKKKKDNDDFKQNLKSSSNK---TEEKYSATQASKSKNDEFELGGEEN 135
Query: 422 EDKKQKNEE 448
ED+ N E
Sbjct: 136 EDEMPLNGE 144
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/59 (16%), Positives = 27/59 (45%)
Frame = +2
Query: 287 AKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQKNEESKEDK 463
+KEP + D + D + ++ + +++ T + + D D+ + + + E+K
Sbjct: 56 SKEPKDNKPLDNKNDPKKTHNEDESHTNESLPSTDKKKKKDNDDFKQNLKSSSNKTEEK 114
>SPAC12B10.01c ||SPAC31F12.02c, SPAC637.15c|ubiquitin-protein ligase
E3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1647
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Frame = +2
Query: 272 KDEQVAKEPNNRNESD----EQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQK 439
+D+ V + N+ + D E +DD + ES D+ E E D DE D+
Sbjct: 211 QDDHVYDDTNDGTDDDINNNEYKDDESSSGSESYERDE---DVDEEEEEDDDENNDEGDD 267
Query: 440 NEESKEDK 463
+E++ D+
Sbjct: 268 EDENENDE 275
>SPAC167.05 ||SPAC57A7.01|Usp |Schizosaccharomyces pombe|chr
1|||Manual
Length = 601
Score = 27.5 bits (58), Expect = 2.5
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 611 SDNPVKLQRLKRKYEKKARWSISIKPLKPLMKF*RLQNRLFGKK-QNLPLQRT 766
SD+ ++ K EK + S+SIKP K + K + QNR+ +K PL ++
Sbjct: 281 SDSDDDEKKQPSKSEKTSSMSVSIKPPKIIRKGSKEQNRIAKEKASGAPLTKS 333
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/77 (15%), Positives = 35/77 (45%)
Frame = +2
Query: 230 SPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHD 409
SPS +++ + +++ ++ +E D + D ++D+ K+ E+ +
Sbjct: 89 SPSTDDKPNNDVEVDYQELLRQTLEADE-DASDSDDSVDSSNKNSEVSIKRRKTESNSQE 147
Query: 410 GDETEDKKQKNEESKED 460
++ + + +EES +
Sbjct: 148 SVDSSNSESSDEESDSE 164
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Frame = +2
Query: 248 ESTESQPIKDE-QVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDG---- 412
E + PI+ Q A E + + ++E+ R+ GPD+A K ++
Sbjct: 1366 EDIDEAPIEGRAQEALEDEDNDATNEKMVSRSKQHASYEGPDEADKVALRQLKGSNKVED 1425
Query: 413 ---DETEDKKQKNEESKED 460
DE ED+ K++ES D
Sbjct: 1426 VNMDEEEDEGFKSDESVSD 1444
>SPAC1039.09 |isp5||amino acid permease Isp5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 580
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -1
Query: 720 WRRQNFISGFNGFIEMLHLAFFSY 649
+R+ FI GF+GF + A FSY
Sbjct: 260 FRKNAFIHGFHGFCSVFSTAAFSY 283
>SPBC1773.01 |||striatin homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 612
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 251 STESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAE 394
S ES P K+E+V K P+ + +++ + P D KK A+
Sbjct: 222 SGESLPKKEEEVTKSPSFTLDDSVASNEQTLAQLNIESPVDQKKSKAK 269
>SPAC17G8.03c |dpb3||DNA polymerase epsilon subunit
Dpb3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 199
Score = 26.6 bits (56), Expect = 4.4
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Frame = +2
Query: 245 EESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDE-- 418
E+ ++ PIK E+ K P R ++E E + ES KK+T + E + D+
Sbjct: 100 EKVPDAPPIKAERKTKRPRARRAANEGEHN------ESVPAKKVKKNTVKEEEIEKDDES 153
Query: 419 -TEDKKQKNEESKED 460
T + K E + E+
Sbjct: 154 ATTETPVKEEPTGEE 168
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 26.6 bits (56), Expect = 4.4
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +2
Query: 206 RSDGDDRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDR 337
+ +GDD + +++ S+ IK +V+K N+N + D R
Sbjct: 410 KREGDDEVLKASSQQTGNSERIKGVKVSKSQENKNCISLKSDQR 453
>SPBC83.04 |apc15||anaphase-promoting complex subunit Apc15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 136
Score = 26.2 bits (55), Expect = 5.8
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Frame = +2
Query: 251 STESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDETE-D 427
S + Q +EQ +E N E DE+E +E DD E +HD +E + D
Sbjct: 56 SMQEQLDLEEQEREEANQDTELDEEELGSGSFPEEGE-MDDMDGDNEEVEDHDIEEVDLD 114
Query: 428 KKQKNEESKE 457
N ++ E
Sbjct: 115 ADITNADASE 124
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/71 (22%), Positives = 29/71 (40%)
Frame = +2
Query: 221 DRYSPSLEEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETM 400
+ ++PS ST S + P S+ E+D+ + E +A K A+
Sbjct: 212 EEFAPS---SSTPSADSAKPETTNPPPQPQASEPMEEDKTAEELEEAATKEALKKKADQE 268
Query: 401 EHDGDETEDKK 433
+ G+E K+
Sbjct: 269 KQIGNENYKKR 279
>SPBC19F8.03c |||clathrin binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 5.8
Identities = 15/74 (20%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +2
Query: 242 EEESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHDGDET 421
++++ S I+ E ++ + S+E+ +TQ +T + ++ + E +G+E
Sbjct: 309 KKQNESSSTIQKENTVQQ--EASSSEEEAVKSLPETQRTTSRIETQEEEIKEEEMEGEEE 366
Query: 422 EDKKQ-KNEESKED 460
E++++ N ES+ +
Sbjct: 367 EEEEEVPNYESENE 380
>SPBC11G11.05 |rpa34||DNA-directed RNA polymerase I complex subunit
Rpa34 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 251
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = +2
Query: 236 SLEEESTESQPIKDEQVAKEP------NNRNESDEQED 331
S E+ES+ S I+D+ +KEP NN ES+ QED
Sbjct: 12 SSEDESSVSS-IEDQHSSKEPEQSVESNNHGESNAQED 48
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 287 AKEPNNRNESDEQED-DRAMDTQESTGPDDAKKHTAETMEHDGDETEDKKQKNEESKEDK 463
AK P + ++S + R ES D+K +H+ +K+++ K+DK
Sbjct: 571 AKSPPSSSKSGQGSSLSRRASKHESKHKRDSKHEARPESKHESHRESKSAEKDKKDKKDK 630
>SPAC926.04c |hsp90|swo1|heat shock protein
Hsp90|Schizosaccharomyces pombe|chr 1|||Manual
Length = 704
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +2
Query: 263 QPIKDEQVAKEPNNRNESDE---QEDDRAMDTQESTGPDDAKKHTAETMEHDGDETED 427
Q + +V KE E++E +EDD+A +E + K+ + ++ ETE+
Sbjct: 207 QLVVTREVEKEVPEEEETEEVKNEEDDKAPKIEEVDDESEKKEKKTKKVKETTTETEE 264
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/83 (19%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 206 RSDGDDRYSPSLEEESTESQPIKDEQV-----AKEPNNRNESDEQEDDRAMDTQESTGPD 370
RS+G +R + S + + S + ++ P+N E DE+E+ R Q+
Sbjct: 1543 RSNGSNRGNDSRDADGRRSTHYASNKRPRSSDSQSPSNLREEDERENSRRRARQDDRRDR 1602
Query: 371 DAKKHTAETMEHDGDETEDKKQK 439
D+++ + ++K++
Sbjct: 1603 DSRQQRDRPRDRTSRSAREEKRR 1625
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/55 (21%), Positives = 25/55 (45%)
Frame = +2
Query: 245 EESTESQPIKDEQVAKEPNNRNESDEQEDDRAMDTQESTGPDDAKKHTAETMEHD 409
E S +PI+ +Q+ + D + + Q S +DA+K+ + + +D
Sbjct: 33 ESSLLLEPIEQDQLKDLVEEWMHDSNKSDSKLLSNQVSQNDNDARKNLRKRLRND 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,669,655
Number of Sequences: 5004
Number of extensions: 47526
Number of successful extensions: 290
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 277
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 412451140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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