Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_F04
         (868 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-P...    40   0.006
BT024997-1|ABE01227.1|  496|Drosophila melanogaster IP08220p pro...    29   8.3  
AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-P...    29   8.3  

>AE014297-4738|AAF57146.2|  214|Drosophila melanogaster CG15566-PA
           protein.
          Length = 214

 Score = 39.5 bits (88), Expect = 0.006
 Identities = 17/33 (51%), Positives = 19/33 (57%)
 Frame = +3

Query: 519 NHNPNPKYNLNPKASTHQRNRLSRSPRDPNMNP 617
           N NPNP  NLNP  S+H  N  S S  + N NP
Sbjct: 124 NANPNPNLNLNPNPSSHNTNSHSSSQANANANP 156


>BT024997-1|ABE01227.1|  496|Drosophila melanogaster IP08220p
           protein.
          Length = 496

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 197 VPVSLSLPFAPVPLFPSSPGIDCNPVSGEVV 105
           VP   S+  AP PL P+S G+D N V  + V
Sbjct: 429 VPPLTSILRAPRPLSPASNGVDANGVGADAV 459


>AE013599-3130|AAF46673.1|  995|Drosophila melanogaster CG15655-PA
            protein.
          Length = 995

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 197  VPVSLSLPFAPVPLFPSSPGIDCNPVSGEVV 105
            VP   S+  AP PL P+S G+D N V  + V
Sbjct: 928  VPPLTSILRAPRPLSPASNGVDANGVGADAV 958


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,425,615
Number of Sequences: 53049
Number of extensions: 356909
Number of successful extensions: 1433
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4188579408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)