Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_F03
(852 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 46 6e-07
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 46 6e-07
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 45 8e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 44 2e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 44 2e-06
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 43 3e-06
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 43 3e-06
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 43 3e-06
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 43 3e-06
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 43 4e-06
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 42 5e-06
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 42 1e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 1e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 39 7e-05
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 36 5e-04
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 8e-04
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 31 0.010
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 31 0.010
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 31 0.010
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 24 2.0
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 23 4.7
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 6e-07
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 45.6 bits (103), Expect = 6e-07
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 107 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGS 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 45.2 bits (102), Expect = 8e-07
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V++NGS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGS 98
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTC 532
+ + M +P D Q C
Sbjct: 99 CLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTC 532
+ + M +P D Q C
Sbjct: 99 CLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 44.0 bits (99), Expect = 2e-06
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAAXTAGDYALRARVSNNGS 451
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
V + + + +P D QTC +
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLK 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 44.0 bits (99), Expect = 2e-06
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAAXTAGDYALRARVSNNGS 451
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
V + + + +P D QTC +
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 43.2 bits (97), Expect = 3e-06
Identities = 19/60 (31%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y V+++GS
Sbjct: 39 LKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGS 98
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 43.2 bits (97), Expect = 3e-06
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +2
Query: 197 KIVVNLTL-HLRHANIRESESTXRILADLQMNWIDKRLXWNAGEWG-CSTWLVSSERLWR 370
K+ VN L ++ N+ E + L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 371 PDVVLLNAAAXTAGDYALRAR----VSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
PD+VL N A G+Y +R + + NG V + + + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 43.2 bits (97), Expect = 3e-06
Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 5/116 (4%)
Frame = +2
Query: 200 IVVNLTLHLRHA---NIRESESTXRILADLQMNWIDKRLXWNAGEWGCSTWL-VSSERLW 367
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 368 RPDVVLLNAAAXTAGDYAL-RARVSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
PD+VL N A G + +A + G V + + +P D QTC
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 43.2 bits (97), Expect = 3e-06
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 451
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTC 532
+ + + +P D Q C
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRC 162
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 42.7 bits (96), Expect = 4e-06
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 3/104 (2%)
Frame = +2
Query: 239 IRESESTXRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLN---AAAXTA 409
I E + T + + +W+D+RL + G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 410 GDYALRARVSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
R+ +G V RL I M +N+P D Q C Q
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQ 147
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 42.3 bits (95), Expect = 5e-06
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 442
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
+G V + + + +P D+QTC +
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLK 170
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Frame = +2
Query: 200 IVVNLTLHLRHANIRESESTXRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPD 376
+V L+LH ++ E + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 377 VVLLNAAAXTAGDYALRAR--VSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
+L N A + VS+ G V + + + + +P D Q C +
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.5 bits (93), Expect = 1e-05
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWGCSTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 442
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
G VS + + + +P D Q+C
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSC 172
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.5 bits (88), Expect = 4e-05
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Frame = +2
Query: 278 LQMNWIDKRLXWNAGEWG-CSTWLVSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 442
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
G V + + + +P D QTC
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 39.1 bits (87), Expect = 5e-05
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 4/114 (3%)
Frame = +2
Query: 206 VNLTLHLRHANIRESESTXRILADLQMNWIDKRLXWNAGEW-GCSTWLVSSERLWRPDVV 382
++ L ++H N+ E T L++ W L W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 383 L--LNAAAXTAGDYALRARVSNNGSVS*IKRLDISTPIXMXXDN-WPXDMQTCT 535
+ + + ++ V N+G++ + TP+ WP D+ CT
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVCEYDHTWWPYDILNCT 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 38.7 bits (86), Expect = 7e-05
Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)
Frame = +2
Query: 281 QMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGS 451
+ +W D RL + S + ER+WRPD N + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 452 VS*IKRLDISTPIXMXXDNWPXDMQTCTFQCSVLXCAIV 568
+ RL I M N+P D Q+C C V
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILGSCKCIYV 188
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 35.9 bits (79), Expect = 5e-04
Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Frame = +2
Query: 203 VVNLTLHLRH-ANIRESESTXRILADLQMNWIDKRLXWN--AGEWGCSTWLVSSERLWRP 373
+V + L +R A I + + + + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 374 DVVLLNAAAXTAGDYALR---ARVSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
D+ N + + R+ NGSV R+ ++ M +P D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.1 bits (77), Expect = 8e-04
Identities = 28/104 (26%), Positives = 41/104 (39%), Gaps = 3/104 (2%)
Frame = +2
Query: 239 IRESESTXRILADLQMNWIDKRLXWNAGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDY 418
I E I L W D+RL ++ E + +E++W PD N D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 419 ALR---ARVSNNGSVS*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
R R+S +GSV+ R + M +P D Q CT +
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVE 178
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.1 bits (72), Expect = 0.003
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 5/89 (5%)
Frame = +2
Query: 290 WIDKRLXWN--AGEWGCSTWLVSSERLWRPDVVLLNAAAXTAGDYALR---ARVSNNGSV 454
W+D+RL +N G T L + R+W PD+ N + + R+ NGSV
Sbjct: 90 WLDERLRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSV 148
Query: 455 S*IKRLDISTPIXMXXDNWPXDMQTCTFQ 541
R+ ++ M +P D Q C+ +
Sbjct: 149 LYSIRISLTLSCPMNLKLYPLDRQVCSLR 177
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.010
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 290 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 442
W D RL + G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
+GS++ RL I+ M +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.010
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 290 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 442
W D RL + G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
+GS++ RL I+ M +P D Q C
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLC 152
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.5 bits (68), Expect = 0.010
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Frame = +2
Query: 290 WIDKRLXWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 442
W D RL + G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 443 NGSVS*IKRLDISTPIXMXXDNWPXDMQTC 532
+GS++ RL I+ M +P D Q C
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLC 91
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.8 bits (49), Expect = 2.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Frame = -2
Query: 797 PGPXEXGPPRXPGPXPPXRXPGXXLQXKPSG 705
P P + PP P PP + P + SG
Sbjct: 40 PNPSQGPPPGGPPGAPPSQNPSQMMISPASG 70
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 22.6 bits (46), Expect = 4.7
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 5/64 (7%)
Frame = +2
Query: 356 ERLWRPDVVLLNAAAXTAGDYALRARVSN-----NGSVS*IKRLDISTPIXMXXDNWPXD 520
+ LW+PD LNA AL + S+ N +V R+ M +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 521 MQTC 532
+Q C
Sbjct: 127 IQIC 130
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,349
Number of Sequences: 438
Number of extensions: 3816
Number of successful extensions: 51
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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