Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_F02
         (858 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical pr...   224   7e-59
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    36   0.049
AY551964-1|AAS65428.1|  795|Caenorhabditis elegans enhancer of p...    29   4.2  
AL132904-22|CAC35840.2|  795|Caenorhabditis elegans Hypothetical...    29   4.2  
U80837-3|AAB37904.2|  384|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical ...    29   5.6  
Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical p...    28   9.8  
Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical pr...    28   9.8  
AF043703-4|AAK21502.2|  212|Caenorhabditis elegans Hypothetical ...    28   9.8  

>Z71181-6|CAA94899.1|  647|Caenorhabditis elegans Hypothetical
           protein K07C5.6 protein.
          Length = 647

 Score =  224 bits (547), Expect = 7e-59
 Identities = 107/211 (50%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
 Frame = +1

Query: 67  GKDINPHIPQYIASAPWYYGTSGPTLKHQRPQEDREGQFTKLDKYYNKGVDVTKVATKFR 246
           G+DINPHIP +I+  PWY  + GPTLKHQRP E+RE + T++ ++Y KG    K ATKFR
Sbjct: 53  GRDINPHIPMFISQNPWYVPSEGPTLKHQRPHEEREKKMTQIHEWYQKGT-TGKSATKFR 111

Query: 247 KGACENCGAMTHKKKDCLERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPE 426
           KGACENCGAM H+K+DC +RPRK  AK TN  IA D++ QP+L L +D KRDRWNGYDP 
Sbjct: 112 KGACENCGAMGHQKRDCFDRPRKSNAKETNDNIAEDDYVQPNLTLGFDAKRDRWNGYDPS 171

Query: 427 QHKAIIEEYQKVEEAK---RELRAKKLEIDPTAXXXXXXXXXXXXXXXXXXXMPGXKVDS 597
            HK +IE+Y+ +EEA+   RE   K+ E++P                          +DS
Sbjct: 172 THKQVIEDYEHLEEARKVVREHEMKEGEVEPATTEDGAPKDEDMYAEDADMAGVSVDMDS 231

Query: 598 XQRITVRNLRXREDTAXXLRNLDPIPPXTNP 690
             RITVRNLR REDTA  L NL    P  +P
Sbjct: 232 RTRITVRNLRIREDTAKYLYNLAENSPYYDP 262


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
           protein Y26D4A.9 protein.
          Length = 1435

 Score = 35.5 bits (78), Expect = 0.049
 Identities = 36/119 (30%), Positives = 61/119 (51%), Gaps = 3/119 (2%)
 Frame = +1

Query: 154 RPQEDREGQFTKLDKYYNKGVDVTKVATKFRKGACENCGAMTHKKKDCLERPRKIGAKFT 333
           + QE+ E   T+L++   KG+D   +  K ++   E    +     DCL + RK  A+ T
Sbjct: 650 KAQEETEKVKTELEQ--EKGIDYQSILEKIKEAREEVKNVIRSDYTDCLNKVRK--AEDT 705

Query: 334 NAGIAADEFAQPDLNLSYDGK-RDRWNGYDPEQHKAIIEEYQKV-EEAKREL-RAKKLE 501
            A I  +++ +    +   GK +D+      E  KA  EE+QKV EE ++E+ + KK+E
Sbjct: 706 LAKI-ENKYKKESEEVKKTGKNKDKVEKTKEEVEKA-KEEFQKVKEEFQKEVEKVKKVE 762


>AY551964-1|AAS65428.1|  795|Caenorhabditis elegans enhancer of
           polycomb protein.
          Length = 795

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 307 PRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 444
           P  + AK       +D++ +P  + S       W GY P++  A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736


>AL132904-22|CAC35840.2|  795|Caenorhabditis elegans Hypothetical
           protein Y111B2A.11 protein.
          Length = 795

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/46 (23%), Positives = 21/46 (45%)
 Frame = +1

Query: 307 PRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAII 444
           P  + AK       +D++ +P  + S       W GY P++  A++
Sbjct: 691 PTPVPAKMCGTVSDSDDWREPSGSPSESNSSTEWGGYTPQEQHAVV 736


>U80837-3|AAB37904.2|  384|Caenorhabditis elegans Hypothetical
           protein F07E5.5 protein.
          Length = 384

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +1

Query: 250 GACENCGAMTHKKKDCLE 303
           G C  CGA TH ++DC E
Sbjct: 307 GCCNVCGANTHLRRDCPE 324


>AF000263-7|AAK21463.1|  925|Caenorhabditis elegans Hypothetical
           protein T08B2.5b protein.
          Length = 925

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
 Frame = +1

Query: 376 NLSYDGKR--DRWNGYDPEQHKAIIEEYQKVEEAKREL 483
           N   DGKR  +    YDP  H+  +E+Y K  E +R++
Sbjct: 7   NADDDGKRVQNEEGNYDPTDHQRQMEDYYKQYEEQRQV 44


>Z50029-1|CAA90340.2|  460|Caenorhabditis elegans Hypothetical
           protein ZC504.1 protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 18/47 (38%), Positives = 20/47 (42%)
 Frame = -1

Query: 348 RNSCISEFCTYFSRSLQAILLLVCHRTTVFTCPFPEFCCYFCHINSF 208
           R      FC Y  R LQ      CH +   TCP   FC Y   I+SF
Sbjct: 415 RYKTTDHFCPYAIRHLQ------CHPSGS-TCPMGYFCQYLFEISSF 454


>Z81116-14|CAB03310.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 359 NSSAAIPALVNFAPIFLGLSKQSFFLCVIAPQ-FSHAPFLNFVATFVTSTPLL*YLSS 189
           N   AIP +V F PI  G+  ++  L ++ PQ FS+     F    V ST L+ YL +
Sbjct: 247 NLQIAIPLIVIFVPIIAGMIFKA--LSIVNPQAFSNLLNFYFSLHGVLSTILMLYLQN 302


>Z81100-6|CAB03195.2|  335|Caenorhabditis elegans Hypothetical
           protein K08G2.8 protein.
          Length = 335

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = -2

Query: 359 NSSAAIPALVNFAPIFLGLSKQSFFLCVIAPQ-FSHAPFLNFVATFVTSTPLL*YLSS 189
           N   AIP +V F PI  G+  ++  L ++ PQ FS+     F    V ST L+ YL +
Sbjct: 247 NLQIAIPLIVIFVPIIAGMIFKA--LSIVNPQAFSNLLNFYFSLHGVLSTILMLYLQN 302


>Z80344-3|CAB02488.2|  491|Caenorhabditis elegans Hypothetical
           protein F15D4.5 protein.
          Length = 491

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 5/90 (5%)
 Frame = +1

Query: 43  NEDW*KHEGKDINPHIPQYIASAPWY----YGTSGPTLKHQRPQE-DREGQFTKLDKYYN 207
           N+DW  +  + IN H+       P      +  SG  +++Q+     ++G        YN
Sbjct: 297 NKDWNNNTQEAINRHVCHLSTILPRMEAALHQPSGYYVQYQQENPVTKQGNVAPKWNEYN 356

Query: 208 KGVDVTKVATKFRKGACENCGAMTHKKKDC 297
              D  +   K  +  C  CG   H  + C
Sbjct: 357 PPKDAIENTNKGVENTCAFCGLKNHTSEQC 386


>AF043703-4|AAK21502.2|  212|Caenorhabditis elegans Hypothetical
           protein W10C8.4a protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 12/54 (22%), Positives = 25/54 (46%)
 Frame = +1

Query: 301 ERPRKIGAKFTNAGIAADEFAQPDLNLSYDGKRDRWNGYDPEQHKAIIEEYQKV 462
           E   K+  K      A +   +  L  +YD +++ WN +  E    ++ EY+++
Sbjct: 93  EEVDKVIQKLEELNTAMNPILRATLTKNYDARKECWNVFKEESLFPLLREYEEL 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,873,591
Number of Sequences: 27780
Number of extensions: 306222
Number of successful extensions: 1060
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)