Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_F01
         (765 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    33   0.85 
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    33   0.85 
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    33   0.85 
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          33   0.85 
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    33   0.85 
AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.     31   4.5  
AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   6.0  
X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting pr...    30   7.9  
BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein pr...    30   7.9  
BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.        30   7.9  
BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    30   7.9  
BC002914-1|AAH02914.1|  358|Homo sapiens WIPF1 protein protein.        30   7.9  
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    30   7.9  
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    30   7.9  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                30   7.9  
AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protei...    30   7.9  
AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.              30   7.9  
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    30   7.9  

>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP   G  PP  G PPPPPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPP 372



 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  G   PP    PPPPPP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPP 402


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP   G  PP  G PPPPPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPP 372



 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  G   PP    PPPPPP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPP 402


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP   G  PP  G PPPPPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPP 372



 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  G   PP    PPPPPP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPP 402


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP   G  PP  G PPPPPP
Sbjct: 365 PPTPRGPPPPGRGGPPPPPP 384



 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  G   PP    PPPPPP
Sbjct: 395 PPPPGAGGPPMPPPPPPPPP 414


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 33.5 bits (73), Expect = 0.85
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP   G  PP  G PPPPPP
Sbjct: 353 PPTPRGPPPPGRGGPPPPPP 372



 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  G   PP    PPPPPP
Sbjct: 383 PPPPGAGGPPMPPPPPPPPP 402


>AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein.
          Length = 1709

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -2

Query: 686 PPXXXGXXPPXXXXPPPPPP 627
           PP   G  PP    PPPPPP
Sbjct: 637 PPRPDGPPPPEYPPPPPPPP 656


>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45135 fis, clone BRAWH3038252, highly  similar
           to Formin 1 isoform IV. ).
          Length = 844

 Score = 30.7 bits (66), Expect = 6.0
 Identities = 16/48 (33%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
 Frame = -3

Query: 763 PPPXXXXXXGGXXXXKXXXXXXXXXXPPXXGGXXP--PXXGXPPPPPP 626
           PPP       G               PP  GG  P  P  G  PPPPP
Sbjct: 335 PPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLAPPPPP 382


>X86019-1|CAA60014.1|  494|Homo sapiens SH3-domain interacting
           protein protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102


>BX640870-1|CAE45928.1|  510|Homo sapiens hypothetical protein
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102


>BC110288-1|AAI10289.1|  403|Homo sapiens WIPF1 protein protein.
          Length = 403

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102


>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP      PP  G PPPPPP
Sbjct: 319 PPAPPPPPPPMIGIPPPPPP 338


>BC002914-1|AAH02914.1|  358|Homo sapiens WIPF1 protein protein.
          Length = 358

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102



 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP  GG   P  G  PPPPP
Sbjct: 204 PPVPGGPRQPSPGPTPPPPP 223


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP      PP  G PPPPPP
Sbjct: 319 PPAPPPPPPPMIGIPPPPPP 338


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP      PP  G PPPPPP
Sbjct: 447 PPAPPPPPPPMIGIPPPPPP 466


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP      PP  G PPPPPP
Sbjct: 318 PPAPPPPPPPMIGIPPPPPP 337


>AF031588-1|AAC03767.1|  503|Homo sapiens WASP interacting protein
           protein.
          Length = 503

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102


>AC010894-2|AAY14708.1|  503|Homo sapiens unknown protein.
          Length = 503

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 627 GGGGGGXPXXGGXXPPXXGG 686
           GGGGGG    GG  PP  GG
Sbjct: 83  GGGGGGGGSFGGGGPPGLGG 102


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 7.9
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = -3

Query: 685 PPXXGGXXPPXXGXPPPPPP 626
           PP      PP  G PPPPPP
Sbjct: 319 PPAPPPPPPPMIGIPPPPPP 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,194,524
Number of Sequences: 237096
Number of extensions: 2197707
Number of successful extensions: 24590
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12799
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)