Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_E10
(884 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 42 8e-06
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 42 8e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 42 1e-05
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 40 3e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 40 4e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 7e-05
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 39 7e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 38 2e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 35 9e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.002
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 34 0.002
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.003
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.008
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 29 0.075
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.075
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 27 0.17
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.17
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.23
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.23
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.23
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.6
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 8e-06
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 111 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 290
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 291 -GCSTWLVSSERLWRPDVVLLN 353
G ++ +LW+PD+++ N
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.9 bits (94), Expect = 8e-06
Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 111 STRSSQRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW 290
S + +R + ++ +TL + ++ E + A L++ W+D L WN E+
Sbjct: 65 SYNTLERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEY 123
Query: 291 -GCSTWLVSSERLWRPDVVLLN 353
G ++ +LW+PD+++ N
Sbjct: 124 GGVKDLRITPNKLWKPDILMYN 145
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 29.5 bits (63), Expect = 0.043
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 28.3 bits (60), Expect = 0.100
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 28.7 bits (61), Expect = 0.075
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 28.3 bits (60), Expect = 0.100
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 29.9 bits (64), Expect = 0.033
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.5 bits (93), Expect = 1e-05
Identities = 18/77 (23%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCST 302
+R + ++ +TL + ++ E + A L++ W+D L WN E+ G
Sbjct: 2 ERPVANESEPLEVKFGITLQ-QIIDVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKD 60
Query: 303 WLVSSERLWRPDVVLLN 353
++ +LW+PD+++ N
Sbjct: 61 LRITPNKLWKPDILMYN 77
Score = 30.7 bits (66), Expect = 0.019
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 162 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 329
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 330 RPDVVLLN 353
PD+VL N
Sbjct: 104 LPDIVLYN 111
Score = 29.5 bits (63), Expect = 0.043
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 388 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+A + G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 124 KAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.5 bits (88), Expect = 4e-05
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
++ +W D +L W+ E+G L V S+ +WRPD+VL N
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 382 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
A +A ++ G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 126 ATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +3
Query: 162 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 338
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 339 VVLLN 353
+L N
Sbjct: 92 TILYN 96
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +1
Query: 397 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDFGD*XXEYTVCS 576
VS+ G V W+ + + ++ +P D Q C K+ S ++ +++ + V +
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLELEKQSEQGDVSN 172
Query: 577 XQERG 591
Q G
Sbjct: 173 YQANG 177
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 39.1 bits (87), Expect = 5e-05
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +3
Query: 144 PPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSE 320
P + ++ L ++H N+ E TV L++ W L+W + E+ ++ V S
Sbjct: 54 PEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSY 113
Query: 321 RLWRPDVVL 347
+W PD+V+
Sbjct: 114 EIWVPDIVM 122
Score = 25.4 bits (53), Expect = 0.70
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 472 WPNDMQTCTFKFGSRMHNSDEM 537
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 332
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 333 PDVVLLN 353
PD+VL N
Sbjct: 113 PDIVLYN 119
Score = 31.1 bits (67), Expect = 0.014
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 388 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+A V +G V W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.1 bits (87), Expect = 5e-05
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 332
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 333 PDVVLLN 353
PD+VL N
Sbjct: 113 PDIVLYN 119
Score = 33.1 bits (72), Expect = 0.003
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 382 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
A +A + + G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 39.1 bits (87), Expect = 5e-05
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Frame = +3
Query: 129 RTIGTPPPDSKIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWG-CST 302
R +G + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 303 WLVSSERLWRPDVVLLN 353
V SE +W PD+VL N
Sbjct: 95 LHVPSEHIWLPDIVLYN 111
Score = 27.9 bits (59), Expect = 0.13
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 388 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 38.7 bits (86), Expect = 7e-05
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +3
Query: 159 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 332
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 333 PDVVLLN 353
PD+VL N
Sbjct: 111 PDIVLFN 117
Score = 36.3 bits (80), Expect = 4e-04
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 379 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 537
Y + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 127 YKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 38.7 bits (86), Expect = 7e-05
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +3
Query: 240 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 353
++ W D +L WN E+G L V SE +W PD+VL N
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYN 124
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 388 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
+A + G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.5 bits (83), Expect = 2e-04
Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 126 QRTIGTPPPDSKIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTW 305
+R +G + LTL ++ ++ E + L++ W D + WN ++G
Sbjct: 39 ERPVGNESEPLVLSFGLTL-MQIIDVDEKNQLLITNLWLKLEWNDVNMRWNVSDYGGVRD 97
Query: 306 L-VSSERLWRPDVVLLN 353
L + RLW+PDV++ N
Sbjct: 98 LRIPPHRLWKPDVLMYN 114
Score = 30.7 bits (66), Expect = 0.019
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +1
Query: 373 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
G Y V NNG+ ++ + + + +P D Q C KFGS ++ ++D
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.1 bits (77), Expect = 9e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
Score = 33.9 bits (74), Expect = 0.002
Identities = 13/51 (25%), Positives = 26/51 (50%)
Frame = +3
Query: 201 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 353
I E + T + + +W+D+RL++ G+ + + R+W+PD N
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.002
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
Score = 28.7 bits (61), Expect = 0.075
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = +3
Query: 201 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 353
+ E + + + +W D RLS+ S + ER+WRPD N
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 34.3 bits (75), Expect = 0.002
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 397 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMD 540
V ++GSVS + + + +WP D C FGS +H+ +E++
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVN 198
Score = 33.1 bits (72), Expect = 0.003
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Frame = +3
Query: 144 PPPDSKIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVS 314
P +I N+T+ L + + S + + + + + W D LSW ++ G + V
Sbjct: 61 PISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVK 120
Query: 315 SERLWRPDVVLLN 353
S+ +W PD+ + N
Sbjct: 121 SDDIWVPDISVYN 133
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 33.5 bits (73), Expect = 0.003
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Frame = +3
Query: 129 RTIGTPPPDSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCS 299
R G D +V + L +R A I + + +Q + W+D+RL +N G
Sbjct: 48 RPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Query: 300 TWLVSSERLWRPDVVLLN 353
T L + R+W PD+ N
Sbjct: 108 T-LTDASRVWMPDLFFSN 124
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 543
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++ F
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 543
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++ F
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDLVF 190
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 28.7 bits (61), Expect = 0.075
Identities = 12/44 (27%), Positives = 23/44 (52%)
Frame = +1
Query: 412 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 543
++ ++ +L + +M +P+D Q C + S H +DEM F
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEMIF 193
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 28.7 bits (61), Expect = 0.075
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 27.5 bits (58), Expect = 0.17
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 397 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEM 537
+ +G V RL + ++L+ +P D+Q C F S HN +M
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 27.5 bits (58), Expect = 0.17
Identities = 9/41 (21%), Positives = 23/41 (56%)
Frame = +1
Query: 421 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSRMHNSDEMDF 543
++ +L + +M+ +++P+D Q C+ S H + ++ F
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDLVF 162
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.23
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +1
Query: 394 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 370 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 370 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 370 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 212 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.6
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 370 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 513
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.7
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -2
Query: 103 GQ*CCVFAFCRTSYSTSEEKPVTRII 26
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 305 PSAAAPLPCVPTQS 264
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,074
Number of Sequences: 438
Number of extensions: 4386
Number of successful extensions: 87
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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