Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_E09
(854 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine r... 33 1.0
Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine r... 33 1.0
X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine ... 33 1.0
X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic acetyl... 33 1.0
U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine r... 33 1.0
U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine r... 33 1.0
M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic acetyl... 33 1.0
BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor, n... 33 1.0
BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor, n... 33 1.0
BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor, n... 33 1.0
BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor, n... 33 1.0
BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor, n... 33 1.0
BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor, n... 33 1.0
BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein. 33 1.0
BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor, n... 33 1.0
BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor, n... 33 1.0
BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor, n... 33 1.0
AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine... 33 1.0
AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic r... 33 1.0
AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine ... 33 1.0
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 33 1.3
Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.3
X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine re... 32 2.3
X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine r... 32 2.3
U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.3
L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine r... 32 2.3
DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor, n... 32 2.3
BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor, n... 32 2.3
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.3
X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4... 31 5.3
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.3
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 5.3
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 5.3
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 5.3
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 5.3
M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine r... 31 7.1
Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine r... 30 9.3
U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine r... 30 9.3
BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor, n... 30 9.3
AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine... 30 9.3
>Y08418-1|CAA69695.1| 503|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 503
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 161
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 162 TYFPFDYQNCTMK 174
>Y08417-1|CAA69694.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>X67513-1|CAA47851.1| 423|Homo sapiens nicotinic acetylcholine
receptor beta-3 subunit protein.
Length = 423
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 71 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 130
Query: 495 TCTCR 509
C+ +
Sbjct: 131 NCSMK 135
>X53559-1|CAA37625.1| 474|Homo sapiens neuronal nicotinic
acetylcholine receptor alpha-3merase protein.
Length = 474
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 73 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 132
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 133 TYFPFDYQNCTMK 145
>U62438-1|AAB40116.1| 458|Homo sapiens nicotinic acetylcholine
receptor beta3 subunit precursor protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>U62432-1|AAB40110.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha3 subunit precursor protein.
Length = 504
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 162
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 163 TYFPFDYQNCTMK 175
>M37981-1|AAA59942.1| 503|Homo sapiens neuronal nicotinic
acetylcholine receptor protein.
Length = 503
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 102 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 161
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 162 TYFPFDYQNCTMK 174
>BT006897-1|AAP35543.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>BT006646-1|AAP35292.1| 489|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>BC098443-1|AAH98443.1| 504|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 504
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 162
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 163 TYFPFDYQNCTMK 175
>BC069788-1|AAH69788.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>BC069703-1|AAH69703.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>BC069681-1|AAH69681.1| 458|Homo sapiens cholinergic receptor,
nicotinic, beta 3 protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>BC006114-1|AAH06114.1| 489|Homo sapiens CHRNA3 protein protein.
Length = 489
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>BC002996-1|AAH02996.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>BC001642-1|AAH01642.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>BC000513-1|AAH00513.1| 505|Homo sapiens cholinergic receptor,
nicotinic, alpha 3 protein.
Length = 505
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 104 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 163
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 164 TYFPFDYQNCTMK 176
>AJ007783-1|CAA07682.1| 504|Homo sapiens nicotinic acetylcholine
receptor alpha-3 subunit protein.
Length = 504
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 103 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 162
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 163 TYFPFDYQNCTMK 175
>AF385584-1|AAK68110.1| 489|Homo sapiens nicotinic cholinergic
receptor alpha 3 protein.
Length = 489
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A D +A + G +W P + +
Sbjct: 98 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDV 157
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 158 TYFPFDYQNCTMK 170
>AF140765-1|AAD33063.1| 458|Homo sapiens neuronal acetylcholine
receptor beta-3 subunit precursor protein.
Length = 458
Score = 33.5 bits (73), Expect = 1.0
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXLX-HAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E LW PD+ L +A G + V + G+ W P + M P D Q
Sbjct: 106 PSESLWLPDIVLFENADGRFEGSLMTKVIVKSNGTVVWTPPASYKSSCTMDVTFFPFDRQ 165
Query: 495 TCTCR 509
C+ +
Sbjct: 166 NCSMK 170
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 33.1 bits (72), Expect = 1.3
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = +3
Query: 318 PXERLWRPDVXLXHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQT 497
P +R+W PD+ L + T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNDGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQN 165
Query: 498 CTCR 509
CT +
Sbjct: 166 CTLK 169
>Y08421-1|CAA69698.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>X89741-1|CAA61893.1| 627|Homo sapiens neuronal acetylcholine
receptor alpha-4 subunit protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>X87629-1|CAA60959.1| 602|Homo sapiens nicotinic acetylcholine
receptor protein.
Length = 602
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 89 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 148
Query: 495 TCTCR 509
CT +
Sbjct: 149 NCTMK 153
>U62433-1|AAB40111.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha4 subunit precursor protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>L35901-1|AAA64743.1| 627|Homo sapiens nicotinic acetylcholine
receptor alpha 4 subunit protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>DQ093071-1|AAY88737.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha polypeptide 4 protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>BC096290-1|AAH96290.1| 627|Homo sapiens cholinergic receptor,
nicotinic, alpha 4 protein.
Length = 627
Score = 32.3 bits (70), Expect = 2.3
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P E +WRPD+ L +A +A + + G W P + ++ P D Q
Sbjct: 114 PSELIWRPDIVLYNNADGDFAVTHLTKAHLFHDGRVQWTPPAIYKSSCSIDVTFFPFDQQ 173
Query: 495 TCTCR 509
CT +
Sbjct: 174 NCTMK 178
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>X68275-1|CAA48336.1| 451|Homo sapiens nicotinic receptor beta 4
subunit protein.
Length = 451
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 59 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 118
Query: 495 TCTCR 509
CT +
Sbjct: 119 NCTLK 123
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.3
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +R+W PD+ L +A T V + GS W P + + P D Q
Sbjct: 106 PAKRIWLPDIVLYNNADGTYEVSVYTNLIVRSNGSVLWLPPAIYKSACKIEVKYFPFDQQ 165
Query: 495 TCTCR 509
CT +
Sbjct: 166 NCTLK 170
>M86383-1|AAC84176.1| 502|Homo sapiens nicotinic acetylcholine
receptor alpha 3 subunit precursor protein.
Length = 502
Score = 30.7 bits (66), Expect = 7.1
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 1/73 (1%)
Frame = +3
Query: 294 GAAALGWCPXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXX 470
G A P +++W+PD+ L +A +A + G +W P + +
Sbjct: 101 GGAEFMRVPAQKIWKPDIVLYNNAVGDFQVTTKTKALLKYTGEVTWIPPAIFKSSCKIDV 160
Query: 471 HXRPXDMQTCTCR 509
P D Q CT +
Sbjct: 161 TYFPFDYQNCTMK 173
>Y16282-1|CAA76155.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +++W+PD+ L +A + +A + G +W P + M P D Q
Sbjct: 111 PADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQ 170
Query: 495 TCTCR 509
C+ +
Sbjct: 171 NCSLK 175
>U62435-1|AAB40113.1| 494|Homo sapiens nicotinic acetylcholine
receptor alpha6 subunit precursor protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +++W+PD+ L +A + +A + G +W P + M P D Q
Sbjct: 111 PADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQ 170
Query: 495 TCTCR 509
C+ +
Sbjct: 171 NCSLK 175
>BC014456-1|AAH14456.1| 494|Homo sapiens cholinergic receptor,
nicotinic, alpha 6 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +++W+PD+ L +A + +A + G +W P + M P D Q
Sbjct: 111 PADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQ 170
Query: 495 TCTCR 509
C+ +
Sbjct: 171 NCSLK 175
>AB079251-1|BAC06855.1| 494|Homo sapiens Nicotinic acetylcholine
receptor alpha 6 protein.
Length = 494
Score = 30.3 bits (65), Expect = 9.3
Identities = 15/65 (23%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 PXERLWRPDVXL-XHAAATTGGDXXXRARVSNXGSXSWXPRLDXXTPIAMXXHXRPXDMQ 494
P +++W+PD+ L +A + +A + G +W P + M P D Q
Sbjct: 111 PADKIWKPDIVLYNNAVGDFQVEGKTKALLKYNGMITWTPPAIFKSSCPMDITFFPFDHQ 170
Query: 495 TCTCR 509
C+ +
Sbjct: 171 NCSLK 175
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,504,230
Number of Sequences: 237096
Number of extensions: 1057880
Number of successful extensions: 1571
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1557
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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