Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_E07
(886 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 57 2e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 53 3e-09
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 53 4e-09
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 50 4e-08
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 49 7e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 48 1e-07
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 48 2e-07
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 48 2e-07
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 47 2e-07
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 47 3e-07
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 47 3e-07
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 46 4e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 46 4e-07
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 46 4e-07
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 46 6e-07
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 45 1e-06
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 44 2e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 41 1e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 40 2e-05
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 39 5e-05
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 37 3e-04
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 33 0.005
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 30 0.033
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 28 0.13
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.70
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.9
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 57.2 bits (132), Expect = 2e-10
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 7/146 (4%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANT-RESESTVRIQADLQMNW 259
N +++S ++D+LL YD PD V + + +R E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 260 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXI 430
+D+RL++ G+ + + R+W+PD N + T R+ +G V
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYS 121
Query: 431 KRLDISTPXSMQLDNWPNDMQTCTFQ 508
RL I M L+N+P D Q C Q
Sbjct: 122 SRLTIKAGCPMNLENFPMDTQRCPLQ 147
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 53.2 bits (122), Expect = 3e-09
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 9/153 (5%)
Frame = +2
Query: 68 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NTRESEST 226
I SA C + D LL+ Y+R P S +VV L L L N ++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 227 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RAR 400
+ L+ W D + W+ E+G T L V SE +W PD+VL N A G + +A
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAI 126
Query: 401 VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
+ G V + + + +P D QTC
Sbjct: 127 LHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 52.8 bits (121), Expect = 4e-09
Identities = 36/150 (24%), Positives = 65/150 (43%), Gaps = 8/150 (5%)
Frame = +2
Query: 86 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANTRESESTVRIQADLQ 250
C++ TS S + L YDRD P+ K ++ L ++H N E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 251 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL--LNAAATTAGDYALRARVSNNGSV 421
+ W L+W + E+ ++ V S +W PD+V+ + + ++ V N+G++
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVMHSVTSVGIDLEMPSVECIVFNSGTI 147
Query: 422 SXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+ + WP D+ CT +
Sbjct: 148 LCVPFTTYTPVCEYDHTWWPYDILNCTIHI 177
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 49.6 bits (113), Expect = 4e-08
Identities = 34/141 (24%), Positives = 62/141 (43%), Gaps = 8/141 (5%)
Frame = +2
Query: 101 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-TRESESTVRIQADLQMNWID 265
++++++++LL Y+ + P + VV + +R E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 266 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 436
RLS+ S + ER+WRPD N + + R+S +G + R
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMR 155
Query: 437 LDISTPXSMQLDNWPNDMQTC 499
L I M+L N+P D Q+C
Sbjct: 156 LTIKAKCPMELRNFPMDRQSC 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V++NGS + + + + +P D Q C
Sbjct: 156 QTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 49.2 bits (112), Expect = 5e-08
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 96 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 155
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V++NGS + + + + +P D Q C
Sbjct: 156 QTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 193
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 49.2 bits (112), Expect = 5e-08
Identities = 35/148 (23%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Frame = +2
Query: 86 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLRHANTRESESTVRIQAD-----LQ 250
C + D LL+ Y++ P + LT+ ++ ++ + ++ Q ++
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLWVE 78
Query: 251 MNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVS 424
+W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G V
Sbjct: 79 QSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 138
Query: 425 XIKRLDISTPXSMQLDNWPNDMQTCTFQ 508
+ + ++ +P D QTC +
Sbjct: 139 WKPPAIYKSSCEIDVEYFPFDEQTCVMK 166
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 48.8 bits (111), Expect = 7e-08
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V++NGS + + + + +P D Q C
Sbjct: 88 QTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 48.0 bits (109), Expect = 1e-07
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V+++GS + + M + +P D Q C
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHC 125
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 47.6 bits (108), Expect = 2e-07
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V+++GS + + M + +P D Q C
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHC 125
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 47.6 bits (108), Expect = 2e-07
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 13/153 (8%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLH-LRHANTRESESTVRIQADLQMNW 259
N ++S ++DS +YD+ P+ + V +T++ L ++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 260 IDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNN 412
D RL++ G T V SE +W PD +N ATT+ ++ R+ ++
Sbjct: 68 TDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHS 123
Query: 413 GSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
GS++ RL I+ M L +P D Q C ++
Sbjct: 124 GSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 47.2 bits (107), Expect = 2e-07
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Frame = +2
Query: 113 MIDSLLATYDRDSPPDSKIVVNLTLHLRHANTRESESTVRIQAD-----LQMNWIDKRLS 277
+ D LL+ Y+R P LT+ L ++ E ++ Q ++ W D +L
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVWVEQRWNDYKLK 96
Query: 278 WNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLD 442
WN E+G L V SE +W PD+VL N A G+Y + +A + G VS
Sbjct: 97 WNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAI 153
Query: 443 ISTPXSMQLDNWPNDMQTC 499
+ + ++ +P D Q+C
Sbjct: 154 YKSSCEINVEYFPFDEQSC 172
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 46.8 bits (106), Expect = 3e-07
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V+++GS + + + + +P D Q C
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHC 125
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 46.8 bits (106), Expect = 3e-07
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Frame = +2
Query: 164 KIVVNLTL-HLRHANTRESESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 337
K+ VN L ++ N E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 338 PDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
PD+VL N A G+Y +R + + NG V + + ++ + +P D QTC
Sbjct: 111 PDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.8 bits (106), Expect = 3e-07
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 409
++ +W D +L W E+G L V S+ +WRPD+VL N A G+Y + +A V
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYY 137
Query: 410 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+G V + S+ ++ +P D+QTC ++
Sbjct: 138 SGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKL 171
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 46.4 bits (105), Expect = 4e-07
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V+++GS + + + + +P D Q C
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHC 125
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 46.4 bits (105), Expect = 4e-07
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +2
Query: 212 ESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTAGDY 385
E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A G Y
Sbjct: 28 EKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFDGTY 87
Query: 386 ALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
V+++GS + + + + +P D Q C
Sbjct: 88 QTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHC 125
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 46.4 bits (105), Expect = 4e-07
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Frame = +2
Query: 92 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANTRESESTVRIQADLQMN-- 256
N ++S ++DS +YD+ P+ + V +T+++ ++ SE + D
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISS-VSEVLMDFTLDFYFRQF 66
Query: 257 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 409
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 410 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+GS++ RL I+ M L +P D Q C ++
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 156
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.4 bits (105), Expect = 4e-07
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 8/145 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANTRESESTVRIQADLQMN 256
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 257 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVS 424
W D LSW ++ G + V S+ +W PD+ + N+ T G V ++GSVS
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVS 158
Query: 425 XIKRLDISTPXSMQLDNWPNDMQTC 499
+ + + +WP D C
Sbjct: 159 CVPSVKHVAKCATDFSSWPYDTHRC 183
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 46.4 bits (105), Expect = 4e-07
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 245 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 418
++ +W D +L W E+G L V S+ +WRPD+VL NA A +A + + G
Sbjct: 81 VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGL 140
Query: 419 VSXIKRLDISTPXSMQLDNWPNDMQTCTFQ 508
V + + ++ +P D QTC +
Sbjct: 141 VEWKPPAIYKSSCEIDVEYFPFDEQTCVLK 170
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 46.4 bits (105), Expect = 4e-07
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 12/159 (7%)
Frame = +2
Query: 59 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANTRES 217
+C +A + + D LL+ Y+R P ++ V + L L N +
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 218 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLNAAATTAGDYAL- 391
T + ++ W D +L WN ++G T V SE +W PD+VL N A G+Y +
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVT 120
Query: 392 ---RARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
+A + + G V + + ++ +P D QTC
Sbjct: 121 IMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTC 159
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 45.6 bits (103), Expect = 6e-07
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 7/152 (4%)
Frame = +2
Query: 65 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NTRESESTV 229
A+A++ + +++ LL TY+ P +V++ L L + E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 230 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARV 403
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVV 130
Query: 404 SNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
NNG+ + + + + +P D Q C
Sbjct: 131 KNNGTCLYVPPGIFKSTCKIDITWFPFDDQRC 162
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 44.8 bits (101), Expect = 1e-06
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Frame = +2
Query: 167 IVVNLTLHLRHANTRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 343
+V L+LH + E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 344 VVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQ 508
+L N A + VS+ G V + + + ++ +P D Q C +
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLK 148
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 43.6 bits (98), Expect = 2e-06
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANTRESESTVRIQADLQMNWIDKR 271
++D++L YD P D +V + L +R A + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 436
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 437 LDISTPXSMQLDNWPNDMQTCTFQV 511
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.1 bits (92), Expect = 1e-05
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 12/145 (8%)
Frame = +2
Query: 113 MIDSLLATYDRDSPP------DSKIVVNLTLHLRHANTRESEST-VRIQADLQMNWIDKR 271
++D++L YD P D VV + + +R + + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 272 LSWN--AGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKR 436
L +N G T L + R+W PD+ N + + R+ NGSV R
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIR 153
Query: 437 LDISTPXSMQLDNWPNDMQTCTFQV 511
+ ++ M L +P D Q C+ ++
Sbjct: 154 ISLTLSCPMNLKLYPLDRQVCSLRM 178
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 40.3 bits (90), Expect = 2e-05
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +2
Query: 245 LQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNG 415
L W D+RL+++ E + +E++W PD N + D R R+S +G
Sbjct: 88 LNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDG 147
Query: 416 SVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
SV+ R + M L +P D Q CT ++
Sbjct: 148 SVTYGMRFTTTLACMMDLHYYPLDSQNCTVEI 179
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 39.1 bits (87), Expect = 5e-05
Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Frame = +2
Query: 257 WIDKRLSWNAGEWGCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSN 409
W D RL++ G T V SE +W PD +N ATT+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 410 NGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+GS++ RL I+ M L +P D Q C ++
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEI 95
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANTRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 XIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 36.7 bits (81), Expect = 3e-04
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANTRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 XIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 36.7 bits (81), Expect = 3e-04
Identities = 35/149 (23%), Positives = 65/149 (43%), Gaps = 8/149 (5%)
Frame = +2
Query: 89 ENATSLSLMIDSLLAT--YDRD--SPPDSKIVVNLT-LHLRHANTRESESTVRIQADLQM 253
E+ S ++D+LL + YD+ P + VN++ L L A+ ES ++ LQ
Sbjct: 56 EDGKSDKEILDNLLLSTRYDKRLLPPVQGTLTVNVSVLLLSLASPDESSLKYEVEFLLQQ 115
Query: 254 NWIDKRLSW-NAGEWGCSTWLVSSERLWRPDV--VLLNAAATTAGDYALRARVSNNGSVS 424
W D RL + N ++ + + +W PD ++ R+ NG+V+
Sbjct: 116 QWYDPRLRYSNRSQYEFLNAIHHYDDIWLPDTYFIMHGDFKDPLIPVHFALRIYRNGTVN 175
Query: 425 XIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
+ R + +L+ +P D C+F +
Sbjct: 176 YLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 32.7 bits (71), Expect = 0.005
Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +2
Query: 167 IVVNLT-LHLRHANTRESESTVRIQADLQMNWIDKRLSW-NAGEWGCSTWLVSSERLWRP 340
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 341 DV--VLLNAAATTAGDYALRARVSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTCTFQV 511
D ++ R+ NG+V+ + R + +L+ +P D C+F +
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 29.9 bits (64), Expect = 0.033
Identities = 13/64 (20%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 329 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQTC 499
+WRPD NA T + ++ + ++ ++ + +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 500 TFQV 511
+ +
Sbjct: 147 SMMI 150
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 27.9 bits (59), Expect = 0.13
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 11/126 (8%)
Frame = +2
Query: 167 IVVNLTLHLRHANTRESEST-VRIQADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 328
++V+ + + N+ E R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 329 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDISTPXSMQLDNWPNDMQ 493
LW+PD LNA + AL + S+ N +V R+ M+ +P D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 494 TCTFQV 511
C +
Sbjct: 129 ICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.4 bits (53), Expect = 0.70
Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +2
Query: 323 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSXIKRLDISTPXSMQLDNWPNDMQ 493
+ +WRPD NA + T + + + ++ + +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 494 TCTFQV 511
C Q+
Sbjct: 176 ECKLQM 181
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.9
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 310 PSAAAPLPCVPTQS 269
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,061
Number of Sequences: 438
Number of extensions: 3801
Number of successful extensions: 65
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28766349
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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