Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D23
(866 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein. 33 1.3
L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen ... 33 1.3
BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alph... 33 1.3
AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alph... 33 1.3
AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alph... 33 1.3
AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alp... 33 1.3
AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha ... 33 1.3
AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha... 33 1.3
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 4.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 4.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 4.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 4.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 4.1
DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription fac... 31 5.4
BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein. 31 5.4
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 31 5.4
AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated pr... 31 5.4
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 31 5.4
AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6). pr... 31 5.4
AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens ... 31 5.4
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 31 5.4
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 31 5.4
AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein. 31 5.4
AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein. 31 7.2
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 30 9.5
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 30 9.5
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 30 9.5
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 30 9.5
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 30 9.5
>U32169-2|AAC50213.1| 1650|Homo sapiens Pro-a2(XI) protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>L18987-1|AAA35498.1| 663|Homo sapiens alpha-2 type XI collagen
protein.
Length = 663
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 182 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 241
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 242 GEPAVLEPGML 252
>BX248309-1|CAM26005.1| 1622|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1622
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 212 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 271
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 272 GEPAVLEPGML 282
>AL845446-3|CAI95551.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL844527-6|CAI41834.1| 1650|Homo sapiens collagen, type XI, alpha 2
protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL662824-16|CAI17611.2| 1650|Homo sapiens collagen, type XI, alpha
2 protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL645940-2|CAI18063.2| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>AL031228-15|CAI95623.1| 1650|Homo sapiens collagen type XI alpha 2
protein.
Length = 1650
Score = 33.1 bits (72), Expect = 1.3
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
Frame = +2
Query: 515 RPYASSHPPLR--SRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
+P+ + P + SRLH+P +Q P+ PT + I + L P +E A G + +
Sbjct: 240 QPHRAQRSPQQQPSRLHRPQNQEPQSQDPTPGEEEEILESSLLPPLEEAAHGPRGLKGEK 299
Query: 689 APSAYLTPSSL 721
A L P L
Sbjct: 300 GEPAVLEPGML 310
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 4.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 252 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 413
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>DQ986374-1|ABJ15760.1| 447|Homo sapiens T-box transcription factor
TBX20 isoform A protein.
Length = 447
Score = 31.1 bits (67), Expect = 5.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +1
Query: 532 PPSPAISATSTRSSNPRIPYTNHPRLNIHXHQSPDAVLXGVR 657
P +P+ A+S + S P P + PR + + Q P A + G+R
Sbjct: 396 PLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLR 437
>BC007890-1|AAH07890.1| 263|Homo sapiens UBAP2 protein protein.
Length = 263
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 131 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 190
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 191 STGPLASGAAPGYAPPPF 208
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 987 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 1046
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 1047 STGPLASGAAPGYAPPPF 1064
>AL139113-8|CAI39659.1| 358|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 358
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 226 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 285
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 286 STGPLASGAAPGYAPPPF 303
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated protein
2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 987 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 1046
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 1047 STGPLASGAAPGYAPPPF 1064
>AK128134-1|BAC87289.1| 377|Homo sapiens member 6 (SLC12A6).
protein.
Length = 377
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Frame = +2
Query: 464 SQCAGHPFILSHYYWRSRPYASSHPPLRSRLHQPDHQI-PEF--HTPTTPDLTSIXINPL 634
S GH SH + +A SHPP + H H + P + HT + P I PL
Sbjct: 135 SHTPGHTHSCSHLI-HTHSHAHSHPP-NAPTHTHAHTLRPTYCPHTRSHPMHLLTLIRPL 192
Query: 635 TPYXKEFAPG 664
TP PG
Sbjct: 193 TPAHTHLTPG 202
>AK126216-1|BAC86490.1| 135|Homo sapiens protein ( Homo sapiens
cDNA FLJ44228 fis, clone THYMU3006371. ).
Length = 135
Score = 31.1 bits (67), Expect = 5.4
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Frame = +2
Query: 533 HPPLRSRLHQPDHQIPEFHTPTTPDLTSIXIN--PLTPYXKEFAPGLKPPLSSEAP 694
HP + H H HTP+ P L S+ P +P + PG PP E+P
Sbjct: 66 HPNRHTHAHTHTHTHTHTHTPSFPLLLSLGTGAPPCSPCSTQ-PPGRSPPTFDESP 120
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 465 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 524
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 525 STGPLASGAAPGYAPPPF 542
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.1 bits (67), Expect = 5.4
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +2
Query: 527 SSHPPLRSRLHQPDHQIPEFHTPT-TPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSA 700
SS P +S P + + T PD+T N + K+ F G PP S +
Sbjct: 625 SSQAPNKSAGSGPGKGVSVSSSTTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLG 684
Query: 701 YLTPSSLGMAKGVSPPYF 754
P + G A G +PP F
Sbjct: 685 STGPLASGAAPGYAPPPF 702
>AB033111-1|BAA86599.1| 785|Homo sapiens KIAA1285 protein protein.
Length = 785
Score = 31.1 bits (67), Expect = 5.4
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = +2
Query: 518 PYASSHPPLRSRLHQPDHQIPEFHTPTTPDLTSIXINPLTPYXKEFAPGLKPPLSSE 688
P A++ + H P HQ H+P P+ + ++P P + P L+ P+S +
Sbjct: 132 PPAAAEQEVSLLSHSPHHQEAPVHSPEAPEKDPLTLSPTVP-ETDMDPLLQSPVSQK 187
>AF157327-1|AAF67493.1| 583|Homo sapiens AD-012 protein protein.
Length = 583
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 590 TPTTPDLTSIXINPLTPYXKE-FAPGLKPPLSSEAPSAYLTPSSLGMAKGVSPPYF 754
T PD+T N + K+ F G PP S + P + G A G +PP F
Sbjct: 443 TTGLPDMTGSVYNKTQTFDKQGFHAGTPPPFSLPSVLGSTGPLAQGAAPGYAPPPF 498
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 211 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 54 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.3 bits (65), Expect = 9.5
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 629 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 721
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,316,591
Number of Sequences: 237096
Number of extensions: 2650410
Number of successful extensions: 7179
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 6667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7158
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 11095746082
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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