Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D10
(1651 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 42 2e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 35 0.028
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.037
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.049
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 34 0.065
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.15
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.26
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 28 3.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 7.5
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 9.9
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 41.9 bits (94), Expect = 2e-04
Identities = 27/82 (32%), Positives = 31/82 (37%), Gaps = 6/82 (7%)
Frame = +2
Query: 983 PXAXPXXPXP-----PPXGXXXPPRPXXPPPTXXTXXATPXXXPH-PXQDHPPXXPPXPR 1144
P + P P P PP PPRP PPP+ + P P P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSA--PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 1145 XAXSXXPSHPXXSSXPPPATPP 1210
+ PS P PP PP
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPP 203
Score = 34.7 bits (76), Expect = 0.037
Identities = 24/85 (28%), Positives = 27/85 (31%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
PAP ++ A P PPP PP P PP + P P PP
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSS--LPPPAQPAAPVKSPP 185
Query: 1124 XXPPXPRXAXSXXPSHPXXSSXPPP 1198
P P P P PPP
Sbjct: 186 SAPSLPSAVPPMPPKVP-----PPP 205
Score = 31.9 bits (69), Expect = 0.26
Identities = 34/135 (25%), Positives = 37/135 (27%)
Frame = +2
Query: 794 PPXPXXXPSPXXXXPPXPXXPAXXXXPPRTATXXXAXXXXXTXTXXXXXXPAPXHXRAXX 973
PP P P PP P P PP A+ A P P A
Sbjct: 130 PPTPQSELRPPTSAPPRPSIP-----PPSPAS---APPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 974 XXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAX 1153
P A PP PP P P T + P P H P
Sbjct: 182 KSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANT-SSRPSSFA-PPAGHAPNVTSESPKFP 239
Query: 1154 SXXPSHPXXSSXPPP 1198
+ PS P S P P
Sbjct: 240 NRGPSIPSASVPPVP 254
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 35.1 bits (77), Expect = 0.028
Identities = 24/71 (33%), Positives = 25/71 (35%)
Frame = -2
Query: 1206 GVAGGGXEXXXGXEGXXXXAXRGXGGXXGGWSWXGWGCXXGVAXXVXXVGGGXXGRGGXX 1027
G G G G EG G GG GG+ G G GGG G GG
Sbjct: 203 GPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFE----GGPGGFGGGPGGFGGGLGGFGGGP 258
Query: 1026 XPXGGGXGXXG 994
GGG G G
Sbjct: 259 GGFGGGPGGHG 269
Score = 33.1 bits (72), Expect = 0.11
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -2
Query: 1209 GGVAGGGXEXXXGXEGXXXXAXRGXGGXXGGWSWXGWGCXXGVAXXVXXVGGGXXGRGGX 1030
GG GG G G G G G G G GGG G GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGG 250
Query: 1029 XXPXGGGXGXXGXAXG 982
GGG G G G
Sbjct: 251 LGGFGGGPGGFGGGPG 266
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.7 bits (76), Expect = 0.037
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +2
Query: 1034 PPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXSSXPPPATP 1207
PP P PPP+ P PP PP A P P S PPP P
Sbjct: 311 PPPP--PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 34.3 bits (75), Expect = 0.049
Identities = 38/150 (25%), Positives = 46/150 (30%), Gaps = 11/150 (7%)
Frame = +2
Query: 794 PPXPXXXPSPXXXXPPXPXXPAXXXXPPRTATXXXAXXXXXTXTXXXXXXPAPXHX---R 964
PP P + PP A PPR+A + + PAP R
Sbjct: 340 PPPPRSNAAGSIPLPPQ-GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGR 398
Query: 965 AXXXXXPX------AXPXXPXPPPXGXXXPPR--PXXPPPTXXTXXATPXXXPHPXQDHP 1120
+ P + P P PP PP P PP A P P
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-----PLPPSA 453
Query: 1121 PXXPPXPRXAXSXXPSHPXXSSXPPPATPP 1210
P PP P + P P + PPPA P
Sbjct: 454 PIAPPLPAGMPAAPPL-PPAAPAPPPAPAP 482
Score = 33.5 bits (73), Expect = 0.086
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 4/70 (5%)
Frame = +2
Query: 1013 PPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXSS-- 1186
PP G PPP A P P Q PP PR A S P SS
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAA-GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSR 383
Query: 1187 --XPPPATPP 1210
PPA PP
Sbjct: 384 AVSNPPAPPP 393
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/70 (27%), Positives = 25/70 (35%), Gaps = 11/70 (15%)
Frame = +2
Query: 1034 PPRPXXPPPTXXTXXATPXXXPHP-----------XQDHPPXXPPXPRXAXSXXPSHPXX 1180
P P PPP+ T + P P P PP PP R + + ++
Sbjct: 251 PAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAAN--- 307
Query: 1181 SSXPPPATPP 1210
PPP PP
Sbjct: 308 KKRPPPPPPP 317
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/91 (24%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
P P + P P +P PPP+ A + PP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAAN----KKRPP 312
Query: 1124 XXPPXPRXAXSXXP--SHPXXSSXPPPATPP 1210
PP R P + SS PPP PP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 27.5 bits (58), Expect = 5.7
Identities = 31/133 (23%), Positives = 33/133 (24%), Gaps = 3/133 (2%)
Frame = +2
Query: 794 PPXPXXXPSPXXXXPPXPXXPAXXXXP---PRTATXXXAXXXXXTXTXXXXXXPAPXHXR 964
PP P PS PP A P P P P
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 965 AXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPR 1144
P P P P G P P PP A P P P P P
Sbjct: 423 LPPSAPPSLPPSAPPSLPMGA--PAAPPLPPSAPI---APPLPAGMPAAPPLPPAAPAPP 477
Query: 1145 XAXSXXPSHPXXS 1183
A + P+ P S
Sbjct: 478 PAPAPAPAAPVAS 490
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 34.3 bits (75), Expect = 0.049
Identities = 21/64 (32%), Positives = 22/64 (34%)
Frame = -2
Query: 1173 GXEGXXXXAXRGXGGXXGGWSWXGWGCXXGVAXXVXXVGGGXXGRGGXXXPXGGGXGXXG 994
G G + G GG GG G G GG GRGG GG G G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Query: 993 XAXG 982
A G
Sbjct: 66 GAKG 69
Score = 29.5 bits (63), Expect = 1.4
Identities = 21/64 (32%), Positives = 21/64 (32%)
Frame = -2
Query: 1194 GGXEXXXGXEGXXXXAXRGXGGXXGGWSWXGWGCXXGVAXXVXXVGGGXXGRGGXXXPXG 1015
GG G G G GG GG G G G GG GRGG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRG---GARGGRGGRGGARGGRGGSSGGRG 65
Query: 1014 GGXG 1003
G G
Sbjct: 66 GAKG 69
Score = 27.5 bits (58), Expect = 5.7
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 1059 GGGXXGRGGXXXPXGGGXGXXGXAXGXWXXXARXWXG 949
GG GRGG GG G G A G AR G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 27.5 bits (58), Expect = 5.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 1209 GGVAGGGXEXXXGXEGXXXXAXRGXGGXXGG 1117
GG GGG G G A G GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.9 bits (74), Expect = 0.065
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +2
Query: 1004 PXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXS 1183
P P P G P+P P + P P PP PP S P P S
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP------SEAPPVPKPS 1204
Query: 1184 SXPPPATPP 1210
PP PP
Sbjct: 1205 VGVPPVPPP 1213
Score = 30.7 bits (66), Expect = 0.61
Identities = 32/151 (21%), Positives = 39/151 (25%), Gaps = 9/151 (5%)
Frame = +2
Query: 773 PXXXGRXPPXPXXXPSPXXXXPPXPXXPAXXXXPPRTA---TXXXAXXXXXTXTXXXXXX 943
P P P P+P P P P + +
Sbjct: 1053 PKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVP 1112
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
P P A P + P P P G P+P P P P P PP
Sbjct: 1113 PVPAPSGAPPVPKP-SVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV-PKPSVAAPP 1170
Query: 1124 XX------PPXPRXAXSXXPSHPXXSSXPPP 1198
PP P+ A P P + P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP 1201
Score = 29.9 bits (64), Expect = 1.1
Identities = 30/143 (20%), Positives = 34/143 (23%), Gaps = 8/143 (5%)
Frame = +2
Query: 794 PPXPXXXPSPXXXXPPXPXXPAXXXXPPRTATXXXAXXXXXTXTXXXXXXPAPXHXRAXX 973
P P P PP P P + AP
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 974 XXXPXAXPXX---PXPPPXGXXXPPRPXX-----PPPTXXTXXATPXXXPHPXQDHPPXX 1129
P P P PPP P+P PPP+ TP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 1130 PPXPRXAXSXXPSHPXXSSXPPP 1198
PP P + SS P P
Sbjct: 1237 PPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/67 (29%), Positives = 22/67 (32%), Gaps = 9/67 (13%)
Frame = +2
Query: 1037 PRPXXPP---PTXXTXXATPXXXPHPXQDHPPXXP------PXPRXAXSXXPSHPXXSSX 1189
PRP PP P P +DHPP P P + P P SS
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 1190 PPPATPP 1210
PP P
Sbjct: 1021 APPVPLP 1027
Score = 28.7 bits (61), Expect = 2.5
Identities = 34/148 (22%), Positives = 43/148 (29%), Gaps = 5/148 (3%)
Frame = +2
Query: 773 PXXXGRXPPXPXXXPSPXXXXPPXPXXPAXXXXPPRTATXXXAXXXXXTXTXXXXXXPAP 952
P + PP P P PP P P T+T + PAP
Sbjct: 1015 PKLSSKAPPVPL----PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPV-PAP 1069
Query: 953 XHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXX--PPPTXXTXXATPXXXPH---PXQDH 1117
P P P P P G P+P PP + P P P
Sbjct: 1070 SS-EIPSIPAPSGAP--PVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 1118 PPXXPPXPRXAXSXXPSHPXXSSXPPPA 1201
PP P + + P ++ P PA
Sbjct: 1127 SVAAPPVPVPSGAPPVPKPSVAAPPVPA 1154
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/89 (24%), Positives = 27/89 (30%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
P P A P + P P PP P + A P P P
Sbjct: 1033 PIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPA---PS 1089
Query: 1124 XXPPXPRXAXSXXPSHPXXSSXPPPATPP 1210
PP P+ + + P P S PP P
Sbjct: 1090 GIPPVPKPSVAAPPV-PKPSVAVPPVPAP 1117
Score = 27.9 bits (59), Expect = 4.3
Identities = 25/92 (27%), Positives = 27/92 (29%), Gaps = 5/92 (5%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP--XXPPPTXXTXXATPXXXPH---PX 1108
P P A P P PPP P P PP T A P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVG-VPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPS 1248
Query: 1109 QDHPPXXPPXPRXAXSXXPSHPXXSSXPPPAT 1204
P P P S P+ +S P T
Sbjct: 1249 VSTPRSSVPSPHSNASPSPTSSSMASAAPART 1280
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/89 (26%), Positives = 27/89 (30%), Gaps = 1/89 (1%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPP-PXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHP 1120
PAP H A P A P P PP P P P P Q P
Sbjct: 1449 PAPMH--AVAPVQPKAPGMVTNAPAPSSAPAPPAPVSQLPPAVPNVPVPSMIPSVAQQPP 1506
Query: 1121 PXXPPXPRXAXSXXPSHPXXSSXPPPATP 1207
P + + PS + P PA P
Sbjct: 1507 SSVAPATAPSSTLPPSQSSFAHVPSPAPP 1535
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 1022 GXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXSSXPPPA 1201
G P P PP A P P PP P P PS P + PP A
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSA-PTPPPPPMSVPPP-------PSAPPMPAGPPSA 1730
Query: 1202 TPP 1210
PP
Sbjct: 1731 PPP 1733
Score = 28.7 bits (61), Expect = 2.5
Identities = 19/62 (30%), Positives = 20/62 (32%)
Frame = +2
Query: 989 AXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPS 1168
A P P PP+ P P P P PP PP P A S PS
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPA-SSAPS 1742
Query: 1169 HP 1174
P
Sbjct: 1743 VP 1744
Score = 26.6 bits (56), Expect = 9.9
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 761 SXGXPXXXGRXPPXPXXXPSPXXXXPPXPXXPAXXXXPPRTAT 889
S P PP P P PP P P PP A+
Sbjct: 1696 SAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.26
Identities = 20/56 (35%), Positives = 21/56 (37%)
Frame = +2
Query: 1034 PPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXSSXPPPA 1201
PP P PT P P P PP PP P A + P P PPPA
Sbjct: 734 PPPPAVIVPTP-APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP----PPPPA 784
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/60 (26%), Positives = 19/60 (31%)
Frame = +2
Query: 944 PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
PAP P P PPP P P PPP + + P P + P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 28.7 bits (61), Expect = 2.5
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 6/71 (8%)
Frame = +2
Query: 1004 PXPPPXGXXXPPRPXX---PPPTXXTXXATPXXXPHPXQDHPPXXPPXPRXAXSXXPSH- 1171
P PPP P P PPP P P P PP P A S S
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 1172 --PXXSSXPPP 1198
P + P P
Sbjct: 793 YAPAPQAEPEP 803
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.1 bits (62), Expect = 1.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 983 PXAXPXXPXPPPXGXXXPPRPXXPPP 1060
P P P PPP G P +P PPP
Sbjct: 5 PPGNPP-PPPPPPGFEPPSQPPPPPP 29
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 28.3 bits (60), Expect = 3.2
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 1079 ATPXXXPHPXQDHPPXXPPXPRXAXSXXPSHPXXSSXPPPATPP 1210
AT P + PP PP PR + S+ S P PP
Sbjct: 210 ATAASTASPVKKPPPPAPPKPRRLAARTSSNSSGVSSPTSVPPP 253
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 27.1 bits (57), Expect = 7.5
Identities = 16/53 (30%), Positives = 20/53 (37%), Gaps = 6/53 (11%)
Frame = +2
Query: 1034 PPRPXXPPPTXXTXXAT---PXXXPHPXQDHP---PXXPPXPRXAXSXXPSHP 1174
P +P PP P PHP +HP P P P + PS+P
Sbjct: 176 PHQPISKPPVIPNLPKLQVHPNRLPHPIHNHPYSSPTSYPPPLCPATYCPSNP 228
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 26.6 bits (56), Expect = 9.9
Identities = 19/74 (25%), Positives = 23/74 (31%), Gaps = 5/74 (6%)
Frame = +2
Query: 1004 PXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPPXXPP---XPRXAXSXXPSHP 1174
P P PP PP P+ PP PP P + P +P
Sbjct: 484 PFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYP 543
Query: 1175 XXSSXP--PPATPP 1210
+ P P AT P
Sbjct: 544 AVPAMPGIPGATAP 557
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.140 0.492
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,429,843
Number of Sequences: 5004
Number of extensions: 15768
Number of successful extensions: 209
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 138
length of database: 2,362,478
effective HSP length: 76
effective length of database: 1,982,174
effective search space used: 937568302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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