Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP06_FL5_D10
         (1651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    26   0.82 
X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor pro...    26   0.82 
AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor p...    26   0.82 

>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor protein.
          Length = 283

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 164  PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 223

Query: 1115 HP 1120
            HP
Sbjct: 224  HP 225



 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 220  PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGNNRPVYIPQPRPP 279

Query: 1115 HP 1120
            HP
Sbjct: 280  HP 281



 Score = 24.2 bits (50), Expect = 3.3
 Identities = 23/92 (25%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
            P P H R      P A P    P        PRP  P                P     P
Sbjct: 52   PRPPHPRLRREAEPEAEPGNNRPV---YIPQPRPPHPRLRREAELEAEPGNNRPVYISQP 108

Query: 1124 XXPPXPRXAXSXXPSHPXXSSXP---PPATPP 1210
              PP PR      P     ++ P   P   PP
Sbjct: 109  -RPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139



 Score = 24.2 bits (50), Expect = 3.3
 Identities = 23/92 (25%), Positives = 25/92 (27%), Gaps = 3/92 (3%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRPXXPPPTXXTXXATPXXXPHPXQDHPP 1123
            P P H R      P A P    P        PRP  P                P     P
Sbjct: 108  PRPPHPRLRREAEPEAEPGNNRPV---YIPQPRPPHPRLRREAELEAEPGNNRPVYISQP 164

Query: 1124 XXPPXPRXAXSXXPSHPXXSSXP---PPATPP 1210
              PP PR      P     ++ P   P   PP
Sbjct: 165  -RPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 195


>X72576-1|CAA51168.1|  144|Apis mellifera Apidaecin precursor protein.
          Length = 144

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 53   PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 112

Query: 1115 HP 1120
            HP
Sbjct: 113  HP 114


>AF442148-1|AAL35349.1|  199|Apis mellifera apidaecin precursor
            protein.
          Length = 199

 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 24   PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 83

Query: 1115 HP 1120
            HP
Sbjct: 84   HP 85



 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 80   PRPPHPRLRREAEPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 139

Query: 1115 HP 1120
            HP
Sbjct: 140  HP 141



 Score = 26.2 bits (55), Expect = 0.82
 Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 3/62 (4%)
 Frame = +2

Query: 944  PAPXHXRAXXXXXPXAXPXXPXPPPXGXXXPPRP---XXPPPTXXTXXATPXXXPHPXQD 1114
            P P H R      P A P    P       PP P       P        P   P P   
Sbjct: 136  PRPPHPRLRREAKPEAEPGNNRPVYIPQPRPPHPRLRREAEPEAEPGNNRPVYIPQPRPP 195

Query: 1115 HP 1120
            HP
Sbjct: 196  HP 197


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.316    0.140    0.492 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,895
Number of Sequences: 438
Number of extensions: 3852
Number of successful extensions: 23
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 58377000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)