Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D09
(820 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 4e-04
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.021
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 31 0.26
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 30 0.34
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.60
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.60
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 1.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.8
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 4.2
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 5.6
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 5.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 7.4
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 25 9.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.9 bits (89), Expect = 4e-04
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPP P PPPP PPPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 35.9 bits (79), Expect = 0.007
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
P PPP PPPP PPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.1 bits (72), Expect = 0.049
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 561 GGXXPPPPPPXXGXXKXPPXPP 496
GG PPPPPP PP PP
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPP 780
Score = 32.7 bits (71), Expect = 0.064
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = -2
Query: 549 PPPPP----PXXGXXKXPPXPPXXXXXPPXPPPPP 457
PPPPP P P PP P PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.1 bits (62), Expect = 0.79
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 561 GGXXPPPPPPXXGXXKXPPXPP 496
G PPPPP G PP PP
Sbjct: 760 GPPPPPPPPGVAGAGPPPPPPP 781
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.003
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPPXXXKKKKKK 430
PPPPPP G + P PP PPPPP KK+K K
Sbjct: 9 PPPPPPPPGF-EPPSQPP--------PPPPPGYVKKRKNK 39
Score = 32.3 bits (70), Expect = 0.085
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = -1
Query: 550 PPPPPPXXXXXKXXPXPPXXLXXPXXPPPPPXXXXKKKKKK 428
PPPPPP PP PPPPP KK+K K
Sbjct: 9 PPPPPP----------PPGFEPPSQPPPPPPPGYVKKRKNK 39
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.7 bits (81), Expect = 0.004
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPP 463
PPPPPP P PP PP PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 34.3 bits (75), Expect = 0.021
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPPPP K P PPPPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 31.5 bits (68), Expect = 0.15
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
P PP G PP PP PP P P P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.20
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
PPPPPP PP PPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 30.3 bits (65), Expect = 0.34
Identities = 17/62 (27%), Positives = 19/62 (30%)
Frame = -1
Query: 550 PPPPPPXXXXXKXXPXPPXXLXXPXXPPPPPXXXXKKKKKKXFXFFXXGGGGXKTPPPXX 371
PPPPPP + P PPPPP + G PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP--PPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 370 XP 365
P
Sbjct: 369 AP 370
Score = 29.9 bits (64), Expect = 0.45
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPPP + PPP PP PPP
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPPPP PPP PP PP
Sbjct: 362 PPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Score = 27.5 bits (58), Expect = 2.4
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = -3
Query: 632 PPPXXXXXXXXXXXXXGXGVXXXXGXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
PPP G G PPP P P PP PPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP-PRSNAAGSIPLPP--QGRSAPPPPPP 366
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPP----XXXXXPPXPPPP 460
PP PPP P PP PP P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 27.1 bits (57), Expect = 3.2
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -2
Query: 549 PPPPPPXX--GXXKXPPXPPXXXXXPPXPPPPP 457
PP PP G PP PP PP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -2
Query: 546 PPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
PP PP + P P P P PPP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -1
Query: 550 PPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
PPPPPP PP PP P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP 391
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
PP PP P P PP PP P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = -2
Query: 561 GGXXPPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
G PP PP PP P PP PP P
Sbjct: 442 GAPAAPPLPPSAPIA--PPLPAGMPAAPPLPPAAP 474
Score = 25.8 bits (54), Expect = 7.4
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXP 478
PP PPP G PP P P
Sbjct: 254 PPIPPPSNGTVSSPPNSPPRPIAP 277
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.021
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPP 460
P PPPP P PP P PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 33.1 bits (72), Expect = 0.049
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -2
Query: 546 PPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
P PPP PP P PP PPPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 548 PPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
PPPPP PP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 545 PPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPPP PP PPPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
P P PP PP PP PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 230 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 243 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 30.7 bits (66), Expect = 0.26
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -3
Query: 560 GXXXPPPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
G PPPP PPPP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 27.5 bits (58), Expect = 2.4
Identities = 15/60 (25%), Positives = 18/60 (30%)
Frame = -2
Query: 558 GXXPPPPPPXXGXXKXPPXPPXXXXXPPXPPPPPXXXKKKKKKXXXXXXXXXXXXXKPPP 379
G PPPP + P PP PPPP + + PPP
Sbjct: 217 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 559 GXXPPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
G PPPP + P PP PPPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 559 GXXPPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
G PPPP + P PP PPPP
Sbjct: 256 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 559 GXXPPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
G PPPP + P PP PPPP
Sbjct: 269 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 559 GXXPPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
G PPPP + P PP PPPP
Sbjct: 282 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -2
Query: 558 GXXPPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
G PPPP + P PP PPPP
Sbjct: 295 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 3.2
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -1
Query: 559 GXXPPPPPPXXXXXKXXPXPPXXLXXPXXPPPPP 458
G PPPP + P PP PPPP
Sbjct: 308 GEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 30.3 bits (65), Expect = 0.34
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
PP P P PP PP P PP P
Sbjct: 731 PPTPAPTPAVKHHPPPPPVRSSISPSMPPAP 761
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.60
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPP 463
PPPPPP PP PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 545 PPPPXXXXXXKXPPPPXXXXXXXPPPPPP 459
PPPP K PP PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPP 463
PP PPP + PP P PP PPP
Sbjct: 1189 PPVPPP----SEAPPVPKPSVGVPPVPPP 1213
Score = 28.7 bits (61), Expect = 1.0
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPP 463
PP P P G PP P PP PPP
Sbjct: 1169 PPVPAPSSG---IPPVPKPAAGVPPVPPP 1194
Score = 25.8 bits (54), Expect = 7.4
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPPPP 457
P PP PP P P PPP P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 25.4 bits (53), Expect = 9.8
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPPP 463
PP PPP PP P PP P P
Sbjct: 1208 PPVPPPSTA----PPVPTPSAGLPPVPVP 1232
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 28.7 bits (61), Expect = 1.0
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +3
Query: 375 FGGGVXXPPPPXKKKXNXXXXXXXXXXWGGGGG-XXGXXXXXGGXGXFXXXXXXGGGGGG 551
FGGG PPP GG GG G GG G F GGG G
Sbjct: 193 FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPPXXXXXPPXPP--PPP 457
PPP P P P PP PP PPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Score = 26.2 bits (55), Expect = 5.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = -2
Query: 549 PPPPPPXXGXXKXPPXPP 496
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 5.6
Identities = 13/34 (38%), Positives = 13/34 (38%), Gaps = 4/34 (11%)
Frame = -2
Query: 546 PPPPPXXGXXKXPPXPPXXXXX----PPXPPPPP 457
PPP K PP P PP PPPP
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 1.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = -3
Query: 542 PPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPP P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -3
Query: 545 PPPPXXXXXXKXPPPPXXXXXXXPPPPPPP 456
PPP P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.6 bits (56), Expect = 4.2
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 480 PPXPPPPPXXXKKK 439
PP PPPPP +KK
Sbjct: 1095 PPPPPPPPAEVEKK 1108
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 26.2 bits (55), Expect = 5.6
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = -2
Query: 558 GXXPPPPPPXXGXXKXPPXPPXXXXXPPXP 469
G PPPPPP P P P P
Sbjct: 353 GSRPPPPPPMPAPIYNVPNVPTVPTVSPNP 382
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 5.6
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +3
Query: 465 GGGXXGXXXXXGGXGXFXXXXXXGGGGG 548
GGG G GG G F GGG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRG 473
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 25.8 bits (54), Expect = 7.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -2
Query: 576 GXXXXGGXXPPPPPP 532
G GG PPPPPP
Sbjct: 298 GDSANGGLPPPPPPP 312
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.4 bits (53), Expect = 9.8
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +2
Query: 458 GGGGGXGGXX*XXGGXGGXFXXPXXGGGGGG 550
G GG GG GG GG F G GGG
Sbjct: 10 GRGGSRGGRGGFNGGRGG-FGGGRGGARGGG 39
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,826,773
Number of Sequences: 5004
Number of extensions: 31582
Number of successful extensions: 558
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 400438000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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