Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP06_FL5_D07
(839 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 65 9e-13
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 62 8e-12
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 61 1e-11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 60 2e-11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 59 4e-11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 59 6e-11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 58 1e-10
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 57 2e-10
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 57 2e-10
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 56 3e-10
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 56 4e-10
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 55 7e-10
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 53 3e-09
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 52 7e-09
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 48 1e-07
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 45 1e-06
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 42 5e-06
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 42 7e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 3e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 37 3e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 33 0.004
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 32 0.008
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 32 0.008
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 31 0.017
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 31 0.017
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 31 0.017
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 31 0.017
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.16
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 0.66
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 22 6.1
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 64.9 bits (151), Expect = 9e-13
Identities = 42/156 (26%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 346
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G L + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 347 PDVVLLNAAAXTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTF 514
PD+VL N A G+Y +R + + NG V W+ + ++ + + D QTC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 515 KFGSRMXNSDXMDFXI--DKKYTGM---XXSGXWDV 607
KFGS N D + + +K + + SG WD+
Sbjct: 168 KFGSWTFNGDQVSLALYNNKNFVDLSDYWKSGTWDI 203
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V++NGS ++ + + + + D Q C KFGS + + +D +
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 213 SETGGDLSDFITNGEWYLIGMPGKKNTIT 241
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 61.7 bits (143), Expect = 8e-12
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V++NGS ++ + + + + D Q C KFGS + + +D +
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 212
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 213 SETGGDLSDFITNGEWYLIGMPGKKNTIT 241
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 61.3 bits (142), Expect = 1e-11
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V++NGS ++ + + + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 60.5 bits (140), Expect = 2e-11
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V+++GS ++ + M + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 60.1 bits (139), Expect = 2e-11
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V+++GS ++ + M + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 59.3 bits (137), Expect = 4e-11
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V+++GS ++ + + + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V+++GS ++ + + + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 58.8 bits (136), Expect = 6e-11
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 6/149 (4%)
Frame = +2
Query: 212 NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTA 385
++ E + A L++ W+D L WN E+G L ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXID 565
G Y V+++GS ++ + + + + D Q C KFGS + + +D +
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVDLVLS 144
Query: 566 KKYTG----MXXSGXWDVTALSMRXXTXT 640
+ G +G W + + + T T
Sbjct: 145 SETGGDLSDFITNGEWYLIGMPGKKNTIT 173
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 57.6 bits (133), Expect = 1e-10
Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 418
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNAD---GNYEVTLMTKATLKY 142
Query: 419 NGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXIDKKYTG 580
G VSW + + ++ + D Q+C KFGS N +D K+ G
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVDLKHMKQEAG 196
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 56.8 bits (131), Expect = 2e-10
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAAAXTAG-DYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFG 523
PD+VL N A A +A + + G V W + + ++ + D QTC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
Query: 524 S 526
S
Sbjct: 173 S 173
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 56.8 bits (131), Expect = 2e-10
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAAAXTAG-DYALRARVSNNGS 427
++ +W D +L W+ E+G L V S+ +WRPD+VL N A A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 428 VSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
V W + + ++ + D QTC KFGS
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 169
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 56.4 bits (130), Expect = 3e-10
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVVLLNAA-AXTAGDYALRARVSNNGS 427
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 428 VSWIKRLDISTPISMQLDXWXNDMQTCTFKFGSRMXNSDXMDFXIDKKYTG----MXXSG 595
++ + + + + D Q C KFGS + +D + + G +G
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLDLQLQDEAGGDISSFITNG 195
Query: 596 XWDV 607
WD+
Sbjct: 196 EWDL 199
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 56.0 bits (129), Expect = 4e-10
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 176 IVVNLTLHLRHA---NIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLW 343
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 344 RPDVVLLNAAAXTAGDYAL-RARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKF 520
PD+VL N A G + +A + G V W + + + + D QTC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 521 GS 526
GS
Sbjct: 164 GS 165
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 55.2 bits (127), Expect = 7e-10
Identities = 37/124 (29%), Positives = 61/124 (49%), Gaps = 6/124 (4%)
Frame = +2
Query: 173 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWR 346
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 347 PDVVLLNAAAXTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTF 514
PD+VL N A G+Y + +A V +G V W + S+ ++ + D+QTC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 515 KFGS 526
K GS
Sbjct: 170 KLGS 173
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 53.2 bits (122), Expect = 3e-09
Identities = 35/153 (22%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Frame = +2
Query: 173 KIVVNLTLHL--RHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLW 343
+I N+T+ L + + S + + + + + W D LSW ++ ++ V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 344 RPDVVLLNAAAXT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTF 514
PD+ + N+ T G V ++GSVS + + + W D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 515 KFGSRMXNSDXMDFXIDKK---YTGMXXSGXWD 604
FGS + + + ++ +DKK G + WD
Sbjct: 186 NFGSWVHSGEEVNIFLDKKGFHMDGYTNNSKWD 218
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 52.0 bits (119), Expect = 7e-09
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 176 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCXTWLVSSERLWRPD 352
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 353 VVLLNAAAXTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
+L N A + VS+ G V W+ + + ++ + D Q C K+ S
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWAS 151
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 51.2 bits (117), Expect = 1e-08
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +2
Query: 254 LQMNWIDKRLSWNAGEWG-CXTWLVSSERLWRPDVVLLNAAAXTAGDYAL----RARVSN 418
++ W D +L WN ++G T V SE +W PD+VL N A G+Y + +A + +
Sbjct: 73 VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHH 129
Query: 419 NGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
G V W + + ++ + D QTC KFGS
Sbjct: 130 TGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGS 165
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 47.6 bits (108), Expect = 1e-07
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLN---AAAXTA 385
I E + T + + +W+D+RL++ G+ + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 386 GDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
R+ +G V + RL I M L+ + D Q C +FGS
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-06
Identities = 33/132 (25%), Positives = 58/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 179 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCXTWLVSSERLWRP 349
+V + L +R A I + + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 IVRVNLFVRSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 350 DVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKF 520
D+ N + + R+ NGSV + R+ ++ M L + D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 521 GSRMXNSDXMDF 556
S +D + F
Sbjct: 179 ASYGWTTDDLVF 190
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.3 bits (95), Expect = 5e-06
Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 3/118 (2%)
Frame = +2
Query: 182 VNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWL-VSSERLWRPDVV 358
++ L ++H N+ E TV L++ W L+W + E+ + V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 359 L--LNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
+ + + ++ V N+G++ + + W D+ CT S
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCTIHIAS 179
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 41.9 bits (94), Expect = 7e-06
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 179 VVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKRLSWN--AGEWGCXTWLVSSERLWRP 349
VV + + +R + I + +Q + W+D+RL +N G T L + R+W P
Sbjct: 60 VVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYLT-LTDASRVWMP 118
Query: 350 DVVLLNAAAXTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKF 520
D+ N + + R+ NGSV + R+ ++ M L + D Q C+ +
Sbjct: 119 DLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRM 178
Query: 521 GSRMXNSDXMDF 556
S +D + F
Sbjct: 179 ASYGWTTDDLVF 190
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.9 bits (89), Expect = 3e-05
Identities = 26/107 (24%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAAXTAGDY 394
+ E + + + +W D RLS+ + ER+WRPD N
Sbjct: 76 VSELDMDYSMDCYFRQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTI 135
Query: 395 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
+ R+S +G + + RL I M+L + D Q+C GS
Sbjct: 136 TVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 36.7 bits (81), Expect = 3e-04
Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Frame = +2
Query: 215 IRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVSSERLWRPDVVLLNAAAXTAGDY 394
I E I L W D+RL+++ E +E++W PD N D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 395 ALR---ARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
R R+S +GSV++ R + M L + D Q CT + S
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 32.7 bits (71), Expect = 0.004
Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 10/127 (7%)
Frame = +2
Query: 176 IVVNLTLH-LRHANIRESESTVRIQADLQMNWIDKRLSWNAGEWGCXTWLVSSE---RLW 343
+ V +T++ L +++ E + + + W D RL++ G T V SE +W
Sbjct: 36 VEVGVTMYVLSISSLSEVKMDFTLDFYFRQFWTDPRLAFKK-RTGVETLSVGSEFIKNIW 94
Query: 344 RPDVVLLNAA------AXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQT 505
PD +N A T+ ++ R+ ++GS++ RL I+ M L + D Q
Sbjct: 95 VPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTITASCPMNLQYFPMDRQL 151
Query: 506 CTFKFGS 526
C + S
Sbjct: 152 CHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 31.9 bits (69), Expect = 0.008
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCXTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 418
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 67 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 122
Query: 419 NGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
+GS++ RL I+ M L + D Q C + S
Sbjct: 123 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 31.9 bits (69), Expect = 0.008
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 9/96 (9%)
Frame = +2
Query: 266 WIDKRLSWNAGEWGCXTWLVSSE---RLWRPDVVLLNAA------AXTAGDYALRARVSN 418
W D RL++ G T V SE +W PD +N A T+ ++ R+ +
Sbjct: 6 WTDPRLAFKK-RTGVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHH 61
Query: 419 NGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFGS 526
+GS++ RL I+ M L + D Q C + S
Sbjct: 62 SGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 30.7 bits (66), Expect = 0.017
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCXTWLVSSERLWRP 349
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 350 DV--VLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFG 523
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 524 S 526
S
Sbjct: 206 S 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 30.7 bits (66), Expect = 0.017
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCXTWLVSSERLWRP 349
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 350 DV--VLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFG 523
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 524 S 526
S
Sbjct: 206 S 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 30.7 bits (66), Expect = 0.017
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCXTWLVSSERLWRP 349
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 137 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 196
Query: 350 DV--VLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFG 523
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 197 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 256
Query: 524 S 526
S
Sbjct: 257 S 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 30.7 bits (66), Expect = 0.017
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 4/121 (3%)
Frame = +2
Query: 176 IVVNLT-LHLRHANIRESESTVRIQADLQMNWIDKRLSW-NAGEWGCXTWLVSSERLWRP 349
+ VN++ L L A+ ES ++ LQ W D RL + N ++ + + +W P
Sbjct: 86 LTVNVSVLLLSLASPDESSLKYEVEFLLQQQWYDPRLRYSNRSQYEFLNAIHHYDDIWLP 145
Query: 350 DV--VLLNAAAXTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWXNDMQTCTFKFG 523
D ++ R+ NG+V+++ R + +L+ + D C+F
Sbjct: 146 DTYFIMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIE 205
Query: 524 S 526
S
Sbjct: 206 S 206
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.5 bits (58), Expect = 0.16
Identities = 17/81 (20%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +2
Query: 332 ERLWRPDVVLLNAAAXTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWXNDMQ 502
+ +WRPD NA + T + + + ++ ++ +L + +M + +D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 503 TCTFKFGSRMXNSDXMDFXID 565
C + S +D M F D
Sbjct: 176 ECKLQMESLSHTTDEMIFQWD 196
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 25.4 bits (53), Expect = 0.66
Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Frame = +2
Query: 176 IVVNLTLHLRHAN-IRESESTVRIQADLQMNWIDKRLS-----WNAGEWGCXTWLVSSER 337
++V+ + + N I + R+ ++ +WI+ RL + G+ +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 338 LWRPDVVLLNAAAXTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWXNDMQ 502
LW+PD LNA AL + S+ N +V + R+ M+ + D+Q
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 503 TC 508
C
Sbjct: 129 IC 130
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 22.2 bits (45), Expect = 6.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 326 TPAKXCSPTPLRSNSVVCRSNSFED 252
TP + + PL + V CR+N E+
Sbjct: 26 TPRRKKNKKPLPTECVFCRNNGEEE 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,920
Number of Sequences: 438
Number of extensions: 3428
Number of successful extensions: 88
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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